RNA–Protein interactions for RNA: ENST00000521529.5

H2AFV-208, Transcript of H2A histone family member V, humanhuman

TSL 5 BASIC

Gene H2AFV, Length 439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-208ENST00000521529 THOC2Q8NI27 1593 aaKnown RBP12.05□□□□□ -0.48
H2AFV-208ENST00000521529 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
H2AFV-208ENST00000521529 POTEMA6NI47 508 aa12.04□□□□□ -0.48
H2AFV-208ENST00000521529 POTEGQ6S5H5 508 aa12.03□□□□□ -0.48
H2AFV-208ENST00000521529 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
H2AFV-208ENST00000521529 G3V3G9 751 aa12.01□□□□□ -0.49
H2AFV-208ENST00000521529 MFRPQ9BY79 579 aa12.01□□□□□ -0.49
H2AFV-208ENST00000521529 SMARCA2P51531 1590 aa12.01□□□□□ -0.49
H2AFV-208ENST00000521529 NLRP6P59044 892 aa11.99□□□□□ -0.49
H2AFV-208ENST00000521529 MICALL2Q8IY33 904 aa11.99□□□□□ -0.49
H2AFV-208ENST00000521529 ATAD2BQ9ULI0 1458 aa11.99□□□□□ -0.49
H2AFV-208ENST00000521529 ST18O60284 1047 aa11.97□□□□□ -0.49
H2AFV-208ENST00000521529 SNPHO15079 494 aa11.94□□□□□ -0.5
H2AFV-208ENST00000521529 HS6ST3Q8IZP7 471 aa11.93□□□□□ -0.5
H2AFV-208ENST00000521529 TMEM92Q6UXU6 159 aa11.92□□□□□ -0.5
H2AFV-208ENST00000521529 HMGXB3Q12766 1538 aa11.91□□□□□ -0.5
H2AFV-208ENST00000521529 KIF21AQ7Z4S6 1674 aa11.91□□□□□ -0.5
H2AFV-208ENST00000521529 LAMC3Q9Y6N6 1575 aa11.88□□□□□ -0.51
H2AFV-208ENST00000521529 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
H2AFV-208ENST00000521529 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
H2AFV-208ENST00000521529 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
H2AFV-208ENST00000521529 BAZ1BQ9UIG0 1483 aaKnown RBP11.85□□□□□ -0.51
H2AFV-208ENST00000521529 HOXB3P14651 431 aaPredicted RBP11.85□□□□□ -0.51
H2AFV-208ENST00000521529 SMARCA4P51532 1647 aa11.82□□□□□ -0.52
H2AFV-208ENST00000521529 PPP1R37O75864 691 aa11.82□□□□□ -0.52
H2AFV-208ENST00000521529 PCDH10Q9P2E7 1040 aa11.82□□□□□ -0.52
H2AFV-208ENST00000521529 MRC2Q9UBG0 1479 aa11.79□□□□□ -0.52
H2AFV-208ENST00000521529 NKX1-1Q15270 411 aaPredicted RBP11.79□□□□□ -0.52
H2AFV-208ENST00000521529 MARVELD3Q96A59 401 aa11.79□□□□□ -0.52
H2AFV-208ENST00000521529 WDR62O43379 1518 aa11.76□□□□□ -0.53
H2AFV-208ENST00000521529 RIMBP3CA6NJZ7 1639 aa11.76□□□□□ -0.53
H2AFV-208ENST00000521529 RIMBP3BA6NNM3 1639 aa11.76□□□□□ -0.53
H2AFV-208ENST00000521529 RIMBP3Q9UFD9 1639 aa11.76□□□□□ -0.53
H2AFV-208ENST00000521529 KIF3CO14782 793 aa11.76□□□□□ -0.53
H2AFV-208ENST00000521529 DOK7Q18PE1 504 aa11.76□□□□□ -0.53
H2AFV-208ENST00000521529 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
H2AFV-208ENST00000521529 C2orf72A6NCS6 295 aa11.72□□□□□ -0.53
H2AFV-208ENST00000521529 EMP3P54852 163 aa11.72□□□□□ -0.53
H2AFV-208ENST00000521529 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.53
H2AFV-208ENST00000521529 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.53
H2AFV-208ENST00000521529 ZNF710Q8N1W2 664 aa11.71□□□□□ -0.53
H2AFV-208ENST00000521529 POTEB3A0JP26 581 aa11.68□□□□□ -0.54
H2AFV-208ENST00000521529 POTEBQ6S5H4 581 aa11.68□□□□□ -0.54
H2AFV-208ENST00000521529 RIMBP2O15034 1052 aa11.67□□□□□ -0.54
H2AFV-208ENST00000521529 CYB5RLQ6IPT4 315 aa11.67□□□□□ -0.54
H2AFV-208ENST00000521529 ZSWIM6Q9HCJ5 1215 aa11.67□□□□□ -0.54
H2AFV-208ENST00000521529 PLSCR2Q9NRY7 297 aa11.67□□□□□ -0.54
H2AFV-208ENST00000521529 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
H2AFV-208ENST00000521529 ARHGEF11O15085 1522 aa11.66□□□□□ -0.54
H2AFV-208ENST00000521529 GPR153Q6NV75 609 aa11.66□□□□□ -0.54
H2AFV-208ENST00000521529 FAM205CA6NFA0 338 aa11.65□□□□□ -0.54
H2AFV-208ENST00000521529 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.54
H2AFV-208ENST00000521529 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
H2AFV-208ENST00000521529 RYDENQ9NUL5 291 aaKnown RBP11.64□□□□□ -0.55
H2AFV-208ENST00000521529 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
H2AFV-208ENST00000521529 GTPBP6O43824 516 aaPredicted RBP11.62□□□□□ -0.55
H2AFV-208ENST00000521529 AMER1Q5JTC6 1135 aaPredicted RBP11.62□□□□□ -0.55
H2AFV-208ENST00000521529 MROH2BQ7Z745 1585 aa11.6□□□□□ -0.55
H2AFV-208ENST00000521529 FANCD2Q9BXW9 1451 aa11.59□□□□□ -0.55
H2AFV-208ENST00000521529 ARSIQ5FYB1 569 aa11.59□□□□□ -0.55
H2AFV-208ENST00000521529 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
H2AFV-208ENST00000521529 SLC34A2O95436 690 aa11.57□□□□□ -0.56
H2AFV-208ENST00000521529 KHSRPQ92945 711 aaKnown RBP eCLIP11.57□□□□□ -0.561e-8■■■□□ 14.6
H2AFV-208ENST00000521529 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
H2AFV-208ENST00000521529 ERBB3P21860 1342 aa11.57□□□□□ -0.56
H2AFV-208ENST00000521529 FOXK1P85037 733 aa11.56□□□□□ -0.56
H2AFV-208ENST00000521529 KRTAP3-3Q9BYR6 98 aa11.55□□□□□ -0.56
H2AFV-208ENST00000521529 KRTAP3-2Q9BYR7 98 aa11.55□□□□□ -0.56
H2AFV-208ENST00000521529 URB2Q14146 1524 aaKnown RBP11.54□□□□□ -0.56
H2AFV-208ENST00000521529 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
H2AFV-208ENST00000521529 ARAP1Q96P48 1450 aa11.52□□□□□ -0.56
H2AFV-208ENST00000521529 DSG2Q14126 1118 aa11.52□□□□□ -0.57
H2AFV-208ENST00000521529 CRISPLD2Q9H0B8 497 aa11.52□□□□□ -0.57
H2AFV-208ENST00000521529 PCDHGA4Q9Y5G9 962 aa11.52□□□□□ -0.57
H2AFV-208ENST00000521529 PLPP6Q8IY26 295 aa11.51□□□□□ -0.57
H2AFV-208ENST00000521529 ZNF608Q9ULD9 1512 aaPredicted RBP11.5□□□□□ -0.57
H2AFV-208ENST00000521529 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
H2AFV-208ENST00000521529 ZNF316A6NFI3 1004 aaPredicted RBP11.48□□□□□ -0.57
H2AFV-208ENST00000521529 NUDT7P0C024 238 aa11.48□□□□□ -0.57
H2AFV-208ENST00000521529 SPNS2Q8IVW8 549 aa11.47□□□□□ -0.57
H2AFV-208ENST00000521529 PTCD2Q8WV60 388 aaKnown RBP11.47□□□□□ -0.57
H2AFV-208ENST00000521529 BBXQ8WY36 941 aaPredicted RBP11.46□□□□□ -0.57
H2AFV-208ENST00000521529 ZNF687Q8N1G0 1237 aa11.45□□□□□ -0.58
H2AFV-208ENST00000521529 CFTRP13569 1480 aa11.44□□□□□ -0.58
H2AFV-208ENST00000521529 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
H2AFV-208ENST00000521529 WIZO95785 1651 aa11.43□□□□□ -0.58
H2AFV-208ENST00000521529 PDE4AP27815 886 aa11.42□□□□□ -0.58
H2AFV-208ENST00000521529 PPP1R15BQ5SWA1 713 aa11.42□□□□□ -0.58
H2AFV-208ENST00000521529 LHX6Q9UPM6 363 aa11.42□□□□□ -0.58
H2AFV-208ENST00000521529 IFT140Q96RY7 1462 aa11.42□□□□□ -0.58
H2AFV-208ENST00000521529 CADPS2Q86UW7 1296 aa11.4□□□□□ -0.58
H2AFV-208ENST00000521529 CHD1O14646 1710 aa11.4□□□□□ -0.58
H2AFV-208ENST00000521529 MMRN1Q13201 1228 aa11.39□□□□□ -0.59
H2AFV-208ENST00000521529 RSF1Q96T23 1441 aaPredicted RBP11.38□□□□□ -0.59
H2AFV-208ENST00000521529 OXER1Q8TDS5 423 aa11.38□□□□□ -0.59
H2AFV-208ENST00000521529 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
H2AFV-208ENST00000521529 MFSD10Q14728 455 aa11.37□□□□□ -0.59
H2AFV-208ENST00000521529 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
H2AFV-208ENST00000521529 SOCS7O14512 581 aa11.36□□□□□ -0.59
H2AFV-208ENST00000521529 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms