RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.57■□□□□ 0.08
NUDCD1-204ENST00000521439 MICALL2Q8IY33 904 aa15.56■□□□□ 0.08
NUDCD1-204ENST00000521439 BCANQ96GW7 911 aa15.52■□□□□ 0.08
NUDCD1-204ENST00000521439 PPP1R37O75864 691 aa15.51■□□□□ 0.07
NUDCD1-204ENST00000521439 SLAIN1Q8ND83 568 aa15.49■□□□□ 0.07
NUDCD1-204ENST00000521439 TMEM92Q6UXU6 159 aa15.35■□□□□ 0.05
NUDCD1-204ENST00000521439 SNPHO15079 494 aa15.28■□□□□ 0.04
NUDCD1-204ENST00000521439 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
NUDCD1-204ENST00000521439 CADPS2Q86UW7 1296 aa15.27■□□□□ 0.04
NUDCD1-204ENST00000521439 KIF3CO14782 793 aa15.26■□□□□ 0.03
NUDCD1-204ENST00000521439 C2orf72A6NCS6 295 aa15.25■□□□□ 0.03
NUDCD1-204ENST00000521439 GPHNQ9NQX3 736 aaPredicted RBP15.21■□□□□ 0.03
NUDCD1-204ENST00000521439 NBR1Q14596 966 aa15.2■□□□□ 0.02
NUDCD1-204ENST00000521439 CRISPLD2Q9H0B8 497 aa15.19■□□□□ 0.02
NUDCD1-204ENST00000521439 WDR70Q9NW82 654 aa15.19■□□□□ 0.02
NUDCD1-204ENST00000521439 PDE4AP27815 886 aa15.17■□□□□ 0.02
NUDCD1-204ENST00000521439 DOK7Q18PE1 504 aa15.16■□□□□ 0.02
NUDCD1-204ENST00000521439 FAM163AQ96GL9 167 aaPredicted RBP15.16■□□□□ 0.02
NUDCD1-204ENST00000521439 NCKAP5LQ9HCH0 1330 aa15.16■□□□□ 0.02
NUDCD1-204ENST00000521439 FOXK1P85037 733 aa15.15■□□□□ 0.02
NUDCD1-204ENST00000521439 HOXB3P14651 431 aaPredicted RBP15.13■□□□□ 0.01
NUDCD1-204ENST00000521439 P3H3Q8IVL6 736 aa15.12■□□□□ 0.01
NUDCD1-204ENST00000521439 RIMBP2O15034 1052 aa15.1■□□□□ 0.01
NUDCD1-204ENST00000521439 DSG2Q14126 1118 aa15.1■□□□□ 0.01
NUDCD1-204ENST00000521439 ST18O60284 1047 aa15.09■□□□□ 0.01
NUDCD1-204ENST00000521439 ZNF710Q8N1W2 664 aa15.09■□□□□ 0.01
NUDCD1-204ENST00000521439 LARP6Q9BRS8 491 aaKnown RBP15.09■□□□□ 0.01
NUDCD1-204ENST00000521439 PLPP6Q8IY26 295 aa15.08■□□□□ 0
NUDCD1-204ENST00000521439 PPP1R15BQ5SWA1 713 aa15.07■□□□□ 0
NUDCD1-204ENST00000521439 LCE2DQ5TA82 110 aaPredicted RBP15.07■□□□□ 0
NUDCD1-204ENST00000521439 DDX27Q96GQ7 796 aaKnown RBP15.07■□□□□ 0
NUDCD1-204ENST00000521439 MFSD10Q14728 455 aa15.06■□□□□ 0
NUDCD1-204ENST00000521439 ZSWIM6Q9HCJ5 1215 aa15.06■□□□□ 0
NUDCD1-204ENST00000521439 SLC34A2O95436 690 aa15.03■□□□□ -0
NUDCD1-204ENST00000521439 KCNV2Q8TDN2 545 aa15.03■□□□□ -0
NUDCD1-204ENST00000521439 PRKCSHP14314 528 aaPredicted RBP15.01□□□□□ -0.01
NUDCD1-204ENST00000521439 HOXB1P14653 301 aaPredicted RBP14.98□□□□□ -0.01
NUDCD1-204ENST00000521439 TPRNQ4KMQ1 711 aa14.98□□□□□ -0.01
NUDCD1-204ENST00000521439 E2F4Q16254 413 aa14.96□□□□□ -0.01
NUDCD1-204ENST00000521439 GPR153Q6NV75 609 aa14.95□□□□□ -0.02
NUDCD1-204ENST00000521439 PTCD2Q8WV60 388 aaKnown RBP14.94□□□□□ -0.02
NUDCD1-204ENST00000521439 PCDHGA4Q9Y5G9 962 aa14.93□□□□□ -0.02
NUDCD1-204ENST00000521439 ARSIQ5FYB1 569 aa14.92□□□□□ -0.02
NUDCD1-204ENST00000521439 POTEMA6NI47 508 aa14.91□□□□□ -0.02
NUDCD1-204ENST00000521439 EMP3P54852 163 aa14.91□□□□□ -0.02
NUDCD1-204ENST00000521439 POTEGQ6S5H5 508 aa14.91□□□□□ -0.02
NUDCD1-204ENST00000521439 ARHGEF1Q92888 912 aaKnown RBP14.91□□□□□ -0.02
NUDCD1-204ENST00000521439 TBC1D12O60347 775 aa14.9□□□□□ -0.02
NUDCD1-204ENST00000521439 MARVELD3Q96A59 401 aa14.9□□□□□ -0.02
NUDCD1-204ENST00000521439 OXER1Q8TDS5 423 aa14.88□□□□□ -0.03
NUDCD1-204ENST00000521439 CAMK2BQ13554 666 aa14.87□□□□□ -0.03
NUDCD1-204ENST00000521439 UPF1Q92900 1129 aaKnown RBP eCLIP14.86□□□□□ -0.03
NUDCD1-204ENST00000521439 KHSRPQ92945 711 aaKnown RBP eCLIP14.85□□□□□ -0.03
NUDCD1-204ENST00000521439 NUDT7P0C024 238 aa14.83□□□□□ -0.04
NUDCD1-204ENST00000521439 EMILIN3Q9NT22 766 aa14.83□□□□□ -0.04
NUDCD1-204ENST00000521439 FAM205CA6NFA0 338 aa14.79□□□□□ -0.04
NUDCD1-204ENST00000521439 ERBB3P21860 1342 aa14.79□□□□□ -0.04
NUDCD1-204ENST00000521439 MAP3K9P80192 1104 aa14.79□□□□□ -0.04
NUDCD1-204ENST00000521439 ARIH1Q9Y4X5 557 aaPredicted RBP14.78□□□□□ -0.04
NUDCD1-204ENST00000521439 KDM4FA0A1W2PPD8 638 aa14.77□□□□□ -0.05
NUDCD1-204ENST00000521439 HS3ST6Q96QI5 342 aa14.77□□□□□ -0.05
NUDCD1-204ENST00000521439 ZNF316A6NFI3 1004 aaPredicted RBP14.76□□□□□ -0.05
NUDCD1-204ENST00000521439 VARS2Q5ST30 1063 aaKnown RBP14.73□□□□□ -0.05
NUDCD1-204ENST00000521439 LHX6Q9UPM6 363 aa14.73□□□□□ -0.05
NUDCD1-204ENST00000521439 EVI5O60447 810 aa14.72□□□□□ -0.05
NUDCD1-204ENST00000521439 TULP1O00294 542 aaPredicted RBP14.71□□□□□ -0.05
NUDCD1-204ENST00000521439 DPYSL4O14531 572 aa14.71□□□□□ -0.05
NUDCD1-204ENST00000521439 SEMA3EO15041 775 aa14.71□□□□□ -0.05
NUDCD1-204ENST00000521439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.71□□□□□ -0.05
NUDCD1-204ENST00000521439 PSDA5PKW4 1024 aaPredicted RBP14.7□□□□□ -0.06
NUDCD1-204ENST00000521439 POTEB3A0JP26 581 aa14.69□□□□□ -0.06
NUDCD1-204ENST00000521439 TESPA1A2RU30 521 aaPredicted RBP14.69□□□□□ -0.06
NUDCD1-204ENST00000521439 POTEBQ6S5H4 581 aa14.69□□□□□ -0.06
NUDCD1-204ENST00000521439 PCDH10Q9P2E7 1040 aa14.69□□□□□ -0.06
NUDCD1-204ENST00000521439 LMOD2Q6P5Q4 547 aa14.68□□□□□ -0.06
NUDCD1-204ENST00000521439 ANO8Q9HCE9 1232 aaPredicted RBP14.68□□□□□ -0.06
NUDCD1-204ENST00000521439 CDAN1Q8IWY9 1227 aa14.67□□□□□ -0.06
NUDCD1-204ENST00000521439 PDIA6Q15084 440 aa14.63□□□□□ -0.07
NUDCD1-204ENST00000521439 ZNF687Q8N1G0 1237 aa14.63□□□□□ -0.07
NUDCD1-204ENST00000521439 SPDYE16A6NNV3 312 aaPredicted RBP14.62□□□□□ -0.07
NUDCD1-204ENST00000521439 PPP4R3BQ5MIZ7 849 aa14.6□□□□□ -0.07
NUDCD1-204ENST00000521439 SMYD5Q6GMV2 418 aa14.6□□□□□ -0.07
NUDCD1-204ENST00000521439 ZNF454Q8N9F8 522 aa14.58□□□□□ -0.08
NUDCD1-204ENST00000521439 JPH4Q96JJ6 628 aa14.58□□□□□ -0.08
NUDCD1-204ENST00000521439 FOSBP53539 338 aa14.57□□□□□ -0.08
NUDCD1-204ENST00000521439 PTGER2P43116 358 aa14.54□□□□□ -0.08
NUDCD1-204ENST00000521439 PBX2P40425 430 aa14.53□□□□□ -0.08
NUDCD1-204ENST00000521439 PHF14O94880 888 aa14.52□□□□□ -0.09
NUDCD1-204ENST00000521439 ZDHHC16Q969W1 377 aa14.5□□□□□ -0.09
NUDCD1-204ENST00000521439 KRTAP3-3Q9BYR6 98 aa14.5□□□□□ -0.09
NUDCD1-204ENST00000521439 KRTAP3-2Q9BYR7 98 aa14.5□□□□□ -0.09
NUDCD1-204ENST00000521439 PCDHGA10Q9Y5H3 936 aa14.5□□□□□ -0.09
NUDCD1-204ENST00000521439 MLLT3P42568 568 aaPredicted RBP14.49□□□□□ -0.09
NUDCD1-204ENST00000521439 ZC3H15Q8WU90 426 aaKnown RBP14.48□□□□□ -0.09
NUDCD1-204ENST00000521439 DDX12PQ92771 950 aa14.48□□□□□ -0.09
NUDCD1-204ENST00000521439 EPAS1Q99814 870 aa14.48□□□□□ -0.09
NUDCD1-204ENST00000521439 TYW1BQ6NUM6 668 aa14.47□□□□□ -0.09
NUDCD1-204ENST00000521439 FBXW7Q969H0 707 aa14.47□□□□□ -0.09
NUDCD1-204ENST00000521439 ARHGAP33O14559 1287 aa14.46□□□□□ -0.09
NUDCD1-204ENST00000521439 BCL2L12Q9HB09 334 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms