RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 ZFYVE16Q7Z3T8 1539 aa32.2■■■□□ 2.74
CERNA3-201ENST00000521403 PCF11O94913 1555 aaKnown RBP32.19■■■□□ 2.74
CERNA3-201ENST00000521403 POGZQ7Z3K3 1410 aa32.18■■■□□ 2.74
CERNA3-201ENST00000521403 YEATS2Q9ULM3 1422 aa32.18■■■□□ 2.74
CERNA3-201ENST00000521403 MADDQ8WXG6 1647 aa32.18■■■□□ 2.74
CERNA3-201ENST00000521403 CASKIN1Q8WXD9 1431 aa32.17■■■□□ 2.74
CERNA3-201ENST00000521403 MAGI2Q86UL8 1455 aa32.16■■■□□ 2.74
CERNA3-201ENST00000521403 ARHGAP5Q13017 1502 aa32.14■■■□□ 2.74
CERNA3-201ENST00000521403 CCDC18Q5T9S5 1454 aa32.13■■■□□ 2.73
CERNA3-201ENST00000521403 RIMS1Q86UR5 1692 aaKnown RBP32.07■■■□□ 2.72
CERNA3-201ENST00000521403 SIGLEC1Q9BZZ2 1709 aa32.06■■■□□ 2.72
CERNA3-201ENST00000521403 FYCO1Q9BQS8 1478 aa32.05■■■□□ 2.72
CERNA3-201ENST00000521403 MLECQ14165 292 aa32.04■■■□□ 2.72
CERNA3-201ENST00000521403 ZNF518AQ6AHZ1 1483 aa32.03■■■□□ 2.72
CERNA3-201ENST00000521403 PLPPR3Q6T4P5 718 aa32.01■■■□□ 2.71
CERNA3-201ENST00000521403 CDC42BPBQ9Y5S2 1711 aa32■■■□□ 2.71
CERNA3-201ENST00000521403 ATP10AO60312 1499 aa32■■■□□ 2.71
CERNA3-201ENST00000521403 AFAP1Q8N556 730 aa32■■■□□ 2.71
CERNA3-201ENST00000521403 MYT1LQ9UL68 1186 aa31.99■■■□□ 2.71
CERNA3-201ENST00000521403 C9orf84Q5VXU9 1444 aa31.98■■■□□ 2.71
CERNA3-201ENST00000521403 PREX2Q70Z35 1606 aa31.97■■■□□ 2.71
CERNA3-201ENST00000521403 ILDR1Q86SU0 546 aaPredicted RBP31.96■■■□□ 2.71
CERNA3-201ENST00000521403 KDM5CP41229 1560 aa31.94■■■□□ 2.7
CERNA3-201ENST00000521403 FER1L4A9Z1Z3 1794 aa31.91■■■□□ 2.7
CERNA3-201ENST00000521403 LMTK3Q96Q04 1460 aa31.91■■■□□ 2.7
CERNA3-201ENST00000521403 ABCC1P33527 1531 aa31.9■■■□□ 2.7
CERNA3-201ENST00000521403 CDC42BPAQ5VT25 1732 aa31.89■■■□□ 2.69
CERNA3-201ENST00000521403 ARHGEF12Q9NZN5 1544 aa31.86■■■□□ 2.69
CERNA3-201ENST00000521403 TRAPPC8Q9Y2L5 1435 aa31.86■■■□□ 2.69
CERNA3-201ENST00000521403 ITSN2Q9NZM3 1697 aa31.84■■■□□ 2.69
CERNA3-201ENST00000521403 ZNF777Q9ULD5 760 aaPredicted RBP31.84■■■□□ 2.69
CERNA3-201ENST00000521403 DIP2CQ9Y2E4 1556 aa31.84■■■□□ 2.69
CERNA3-201ENST00000521403 MLH3Q9UHC1 1453 aa31.83■■■□□ 2.69
CERNA3-201ENST00000521403 ABCA6Q8N139 1617 aa31.81■■■□□ 2.68
CERNA3-201ENST00000521403 GPATCH8Q9UKJ3 1502 aaKnown RBP31.79■■■□□ 2.68
CERNA3-201ENST00000521403 HSPA2P54652 639 aa31.77■■■□□ 2.68
CERNA3-201ENST00000521403 MTUS2Q5JR59 1369 aa31.77■■■□□ 2.68
CERNA3-201ENST00000521403 CEP162Q5TB80 1403 aa31.76■■■□□ 2.68
CERNA3-201ENST00000521403 REREQ9P2R6 1566 aa31.76■■■□□ 2.67
CERNA3-201ENST00000521403 SAMD9LQ8IVG5 1584 aa31.75■■■□□ 2.67
CERNA3-201ENST00000521403 CCNB3Q8WWL7 1395 aa31.73■■■□□ 2.67
CERNA3-201ENST00000521403 SYCP2Q9BX26 1530 aa31.73■■■□□ 2.67
CERNA3-201ENST00000521403 CEBPAP49715 358 aaPredicted RBP31.72■■■□□ 2.67
CERNA3-201ENST00000521403 CFDP1Q9UEE9 299 aaPredicted RBP31.72■■■□□ 2.67
CERNA3-201ENST00000521403 KIDINS220Q9ULH0 1771 aa31.71■■■□□ 2.67
CERNA3-201ENST00000521403 HNRNPMP52272 730 aaKnown RBP eCLIP31.69■■■□□ 2.66
CERNA3-201ENST00000521403 AGLP35573 1532 aa31.67■■■□□ 2.66
CERNA3-201ENST00000521403 SPAG9O60271 1321 aaKnown RBP31.65■■■□□ 2.66
CERNA3-201ENST00000521403 ESF1Q9H501 851 aaKnown RBP31.64■■■□□ 2.66
CERNA3-201ENST00000521403 PLEKHH2Q8IVE3 1493 aa31.64■■■□□ 2.66
CERNA3-201ENST00000521403 EHBP1L1Q8N3D4 1523 aa31.64■■■□□ 2.66
CERNA3-201ENST00000521403 KIAA1107Q9UPP5 1409 aa31.63■■■□□ 2.65
CERNA3-201ENST00000521403 PREX1Q8TCU6 1659 aa31.61■■■□□ 2.65
CERNA3-201ENST00000521403 TIAM1Q13009 1591 aa31.58■■■□□ 2.65
CERNA3-201ENST00000521403 ATP7AQ04656 1500 aa31.57■■■□□ 2.64
CERNA3-201ENST00000521403 ZNF644Q9H582 1327 aaPredicted RBP31.54■■■□□ 2.64
CERNA3-201ENST00000521403 LOC105371045A0A1W2PR82 267 aa31.54■■■□□ 2.64
CERNA3-201ENST00000521403 C3P01024 1663 aa31.54■■■□□ 2.64
CERNA3-201ENST00000521403 UHRF1BP1Q6BDS2 1440 aa31.53■■■□□ 2.64
CERNA3-201ENST00000521403 FBXO41Q8TF61 875 aa31.53■■■□□ 2.64
CERNA3-201ENST00000521403 INO80Q9ULG1 1556 aaPredicted RBP31.52■■■□□ 2.64
CERNA3-201ENST00000521403 SUPT6HQ7KZ85 1726 aaKnown RBP31.51■■■□□ 2.63
CERNA3-201ENST00000521403 CNTLNQ9NXG0 1405 aa31.5■■■□□ 2.63
CERNA3-201ENST00000521403 SETD1BQ9UPS6 1966 aaKnown RBP31.5■■■□□ 2.63
CERNA3-201ENST00000521403 A2MP01023 1474 aa31.47■■■□□ 2.63
CERNA3-201ENST00000521403 NCOA2Q15596 1464 aa31.45■■■□□ 2.62
CERNA3-201ENST00000521403 PLXNC1O60486 1568 aa31.44■■■□□ 2.62
CERNA3-201ENST00000521403 MBD5Q9P267 1494 aa31.44■■■□□ 2.62
CERNA3-201ENST00000521403 VPS8Q8N3P4 1428 aa31.41■■■□□ 2.62
CERNA3-201ENST00000521403 GGT6Q6P531 493 aa31.38■■■□□ 2.61
CERNA3-201ENST00000521403 MROH2AA6NES4 1674 aa31.38■■■□□ 2.61
CERNA3-201ENST00000521403 ADGBQ8N7X0 1667 aa31.38■■■□□ 2.61
CERNA3-201ENST00000521403 ZMYM3Q14202 1370 aa31.37■■■□□ 2.61
CERNA3-201ENST00000521403 CAMSAP2Q08AD1 1489 aa31.36■■■□□ 2.61
CERNA3-201ENST00000521403 STRCQ7RTU9 1775 aa31.35■■■□□ 2.61
CERNA3-201ENST00000521403 DMRT2Q9Y5R5 561 aa31.35■■■□□ 2.61
CERNA3-201ENST00000521403 CLTCQ00610 1675 aaKnown RBP31.35■■■□□ 2.61
CERNA3-201ENST00000521403 RTEL1-TNFRSF6BF6WH68 1400 aa31.34■■■□□ 2.61
CERNA3-201ENST00000521403 CCDC141Q6ZP82 1450 aa31.33■■■□□ 2.61
CERNA3-201ENST00000521403 NPATQ14207 1427 aa31.32■■■□□ 2.61
CERNA3-201ENST00000521403 LRRC9Q6ZRR7 1453 aa31.32■■■□□ 2.6
CERNA3-201ENST00000521403 CERKQ8TCT0 537 aa31.31■■■□□ 2.6
CERNA3-201ENST00000521403 RSPH4AQ5TD94 716 aa31.27■■■□□ 2.6
CERNA3-201ENST00000521403 DHX29Q7Z478 1369 aaKnown RBP31.27■■■□□ 2.6
CERNA3-201ENST00000521403 PPP6R1Q9UPN7 881 aa31.25■■■□□ 2.59
CERNA3-201ENST00000521403 KANK4Q5T7N3 995 aaPredicted RBP31.23■■■□□ 2.59
CERNA3-201ENST00000521403 KIF3BO15066 747 aa31.21■■■□□ 2.59
CERNA3-201ENST00000521403 PTPRKQ15262 1439 aa31.21■■■□□ 2.59
CERNA3-201ENST00000521403 TSPY4P0CV99 314 aa31.2■■■□□ 2.59
CERNA3-201ENST00000521403 TSPY10P0CW01 314 aa31.2■■■□□ 2.59
CERNA3-201ENST00000521403 NCOA1Q15788 1441 aa31.2■■■□□ 2.59
CERNA3-201ENST00000521403 ARHGEF5Q12774 1597 aa31.2■■■□□ 2.58
CERNA3-201ENST00000521403 MAP3K1Q13233 1512 aa31.19■■■□□ 2.58
CERNA3-201ENST00000521403 PTPRTO14522 1441 aa31.19■■■□□ 2.58
CERNA3-201ENST00000521403 CAMSAP1Q5T5Y3 1602 aa31.18■■■□□ 2.58
CERNA3-201ENST00000521403 MYO3AQ8NEV4 1616 aa31.16■■■□□ 2.58
CERNA3-201ENST00000521403 CEP170BQ9Y4F5 1589 aaPredicted RBP31.12■■■□□ 2.57
CERNA3-201ENST00000521403 ZNF142P52746 1687 aaPredicted RBP31.11■■■□□ 2.57
CERNA3-201ENST00000521403 MYOM3Q5VTT5 1437 aa31.11■■■□□ 2.57
CERNA3-201ENST00000521403 APLP2Q06481 763 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms