RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 POGZQ7Z3K3 1410 aa34.67■■■■□ 3.14
HOXA3-204ENST00000521401 ARHGAP5Q13017 1502 aa34.65■■■■□ 3.14
HOXA3-204ENST00000521401 ARHGEF40Q8TER5 1519 aa34.64■■■■□ 3.14
HOXA3-204ENST00000521401 YEATS2Q9ULM3 1422 aa34.62■■■■□ 3.13
HOXA3-204ENST00000521401 MAGI2Q86UL8 1455 aa34.6■■■■□ 3.13
HOXA3-204ENST00000521401 ZFYVE16Q7Z3T8 1539 aa34.56■■■■□ 3.12
HOXA3-204ENST00000521401 CDC42BPBQ9Y5S2 1711 aa34.55■■■■□ 3.12
HOXA3-204ENST00000521401 ARID4BQ4LE39 1312 aaPredicted RBP34.55■■■■□ 3.12
HOXA3-204ENST00000521401 PREX2Q70Z35 1606 aa34.54■■■■□ 3.12
HOXA3-204ENST00000521401 AFAP1Q8N556 730 aa34.53■■■■□ 3.12
HOXA3-204ENST00000521401 ADAMTSL3P82987 1691 aa34.51■■■■□ 3.12
HOXA3-204ENST00000521401 ZNF518AQ6AHZ1 1483 aa34.5■■■■□ 3.11
HOXA3-204ENST00000521401 GPATCH8Q9UKJ3 1502 aaKnown RBP34.5■■■■□ 3.11
HOXA3-204ENST00000521401 MTUS2Q5JR59 1369 aa34.49■■■■□ 3.11
HOXA3-204ENST00000521401 ARHGEF12Q9NZN5 1544 aa34.49■■■■□ 3.11
HOXA3-204ENST00000521401 BCORL1Q5H9F3 1711 aa34.47■■■■□ 3.11
HOXA3-204ENST00000521401 KDM5CP41229 1560 aa34.46■■■■□ 3.11
HOXA3-204ENST00000521401 CDC42BPAQ5VT25 1732 aa34.46■■■■□ 3.11
HOXA3-204ENST00000521401 ABCC1P33527 1531 aa34.45■■■■□ 3.11
HOXA3-204ENST00000521401 TRAPPC8Q9Y2L5 1435 aa34.45■■■■□ 3.11
HOXA3-204ENST00000521401 SIGLEC1Q9BZZ2 1709 aa34.43■■■■□ 3.1
HOXA3-204ENST00000521401 ATP10AO60312 1499 aa34.42■■■■□ 3.1
HOXA3-204ENST00000521401 PTPRMP28827 1452 aa34.41■■■■□ 3.1
HOXA3-204ENST00000521401 VPS8Q8N3P4 1428 aa34.38■■■■□ 3.09
HOXA3-204ENST00000521401 CCNB3Q8WWL7 1395 aa34.38■■■■□ 3.09
HOXA3-204ENST00000521401 ZNF777Q9ULD5 760 aaPredicted RBP34.38■■■■□ 3.09
HOXA3-204ENST00000521401 C9orf84Q5VXU9 1444 aa34.38■■■■□ 3.09
HOXA3-204ENST00000521401 EHBP1L1Q8N3D4 1523 aa34.37■■■■□ 3.09
HOXA3-204ENST00000521401 MLH3Q9UHC1 1453 aa34.37■■■■□ 3.09
HOXA3-204ENST00000521401 CFDP1Q9UEE9 299 aaPredicted RBP34.36■■■■□ 3.09
HOXA3-204ENST00000521401 MADDQ8WXG6 1647 aa34.36■■■■□ 3.09
HOXA3-204ENST00000521401 SAMD9LQ8IVG5 1584 aa34.35■■■■□ 3.09
HOXA3-204ENST00000521401 ITSN2Q9NZM3 1697 aa34.33■■■■□ 3.09
HOXA3-204ENST00000521401 HECW2Q9P2P5 1572 aa34.32■■■■□ 3.09
HOXA3-204ENST00000521401 MLECQ14165 292 aa34.3■■■■□ 3.08
HOXA3-204ENST00000521401 MYT1LQ9UL68 1186 aa34.3■■■■□ 3.08
HOXA3-204ENST00000521401 HNRNPMP52272 730 aaKnown RBP eCLIP34.29■■■■□ 3.08
HOXA3-204ENST00000521401 KIAA1107Q9UPP5 1409 aa34.29■■■■□ 3.08
HOXA3-204ENST00000521401 DIP2CQ9Y2E4 1556 aa34.28■■■■□ 3.08
HOXA3-204ENST00000521401 TIAM1Q13009 1591 aa34.28■■■■□ 3.08
HOXA3-204ENST00000521401 SYCP2Q9BX26 1530 aa34.27■■■■□ 3.08
HOXA3-204ENST00000521401 ABCA6Q8N139 1617 aa34.23■■■■□ 3.07
HOXA3-204ENST00000521401 PLEKHH2Q8IVE3 1493 aa34.23■■■■□ 3.07
HOXA3-204ENST00000521401 REREQ9P2R6 1566 aa34.22■■■■□ 3.07
HOXA3-204ENST00000521401 ZNF644Q9H582 1327 aaPredicted RBP34.22■■■■□ 3.07
HOXA3-204ENST00000521401 NCOA2Q15596 1464 aa34.21■■■■□ 3.07
HOXA3-204ENST00000521401 RIMS1Q86UR5 1692 aaKnown RBP34.21■■■■□ 3.07
HOXA3-204ENST00000521401 KIDINS220Q9ULH0 1771 aa34.18■■■■□ 3.06
HOXA3-204ENST00000521401 SPAG9O60271 1321 aaKnown RBP34.17■■■■□ 3.06
HOXA3-204ENST00000521401 LRRC9Q6ZRR7 1453 aa34.17■■■■□ 3.06
HOXA3-204ENST00000521401 MAP3K1Q13233 1512 aa34.14■■■■□ 3.06
HOXA3-204ENST00000521401 MBD5Q9P267 1494 aa34.14■■■■□ 3.06
HOXA3-204ENST00000521401 KANK4Q5T7N3 995 aaPredicted RBP34.13■■■■□ 3.05
HOXA3-204ENST00000521401 AGLP35573 1532 aa34.13■■■■□ 3.05
HOXA3-204ENST00000521401 SUPT6HQ7KZ85 1726 aaKnown RBP34.13■■■■□ 3.05
HOXA3-204ENST00000521401 PLPPR3Q6T4P5 718 aa34.09■■■■□ 3.05
HOXA3-204ENST00000521401 FER1L4A9Z1Z3 1794 aa34.08■■■■□ 3.05
HOXA3-204ENST00000521401 ATP7AQ04656 1500 aa34.06■■■■□ 3.04
HOXA3-204ENST00000521401 INO80Q9ULG1 1556 aaPredicted RBP34.04■■■■□ 3.04
HOXA3-204ENST00000521401 LMTK3Q96Q04 1460 aa34.03■■■■□ 3.04
HOXA3-204ENST00000521401 CEBPAP49715 358 aaPredicted RBP34.01■■■■□ 3.03
HOXA3-204ENST00000521401 CAMSAP2Q08AD1 1489 aa34.01■■■■□ 3.03
HOXA3-204ENST00000521401 A2MP01023 1474 aa33.97■■■■□ 3.03
HOXA3-204ENST00000521401 RTEL1-TNFRSF6BF6WH68 1400 aa33.96■■■■□ 3.03
HOXA3-204ENST00000521401 PLXNC1O60486 1568 aa33.94■■■■□ 3.02
HOXA3-204ENST00000521401 RSPH4AQ5TD94 716 aa33.94■■■■□ 3.02
HOXA3-204ENST00000521401 CCDC141Q6ZP82 1450 aa33.94■■■■□ 3.02
HOXA3-204ENST00000521401 APLP2Q06481 763 aa33.89■■■■□ 3.02
HOXA3-204ENST00000521401 MYOM3Q5VTT5 1437 aa33.87■■■■□ 3.01
HOXA3-204ENST00000521401 HSPA2P54652 639 aa33.87■■■■□ 3.01
HOXA3-204ENST00000521401 MIA2Q96PC5 1412 aa33.87■■■■□ 3.01
HOXA3-204ENST00000521401 ESF1Q9H501 851 aaKnown RBP33.86■■■■□ 3.01
HOXA3-204ENST00000521401 CNTLNQ9NXG0 1405 aa33.86■■■■□ 3.01
HOXA3-204ENST00000521401 ARHGEF5Q12774 1597 aa33.85■■■■□ 3.01
HOXA3-204ENST00000521401 DHX29Q7Z478 1369 aaKnown RBP33.84■■■■□ 3.01
HOXA3-204ENST00000521401 ADGBQ8N7X0 1667 aa33.81■■■■□ 3
HOXA3-204ENST00000521401 TSPY4P0CV99 314 aa33.79■■■■□ 3
HOXA3-204ENST00000521401 TSPY10P0CW01 314 aa33.79■■■■□ 3
HOXA3-204ENST00000521401 GGT6Q6P531 493 aa33.79■■■■□ 3
HOXA3-204ENST00000521401 C3P01024 1663 aa33.78■■■■□ 3
HOXA3-204ENST00000521401 ZMYM3Q14202 1370 aa33.76■■■■□ 3
HOXA3-204ENST00000521401 PPP6R1Q9UPN7 881 aa33.73■■■□□ 2.99
HOXA3-204ENST00000521401 UHRF1BP1Q6BDS2 1440 aa33.71■■■□□ 2.99
HOXA3-204ENST00000521401 PREX1Q8TCU6 1659 aa33.71■■■□□ 2.99
HOXA3-204ENST00000521401 KIF3BO15066 747 aa33.69■■■□□ 2.98
HOXA3-204ENST00000521401 MAST1Q9Y2H9 1570 aa33.68■■■□□ 2.98
HOXA3-204ENST00000521401 MROH2AA6NES4 1674 aa33.68■■■□□ 2.98
HOXA3-204ENST00000521401 SETD1BQ9UPS6 1966 aaKnown RBP33.65■■■□□ 2.98
HOXA3-204ENST00000521401 NPATQ14207 1427 aa33.65■■■□□ 2.98
HOXA3-204ENST00000521401 FGD6Q6ZV73 1430 aa33.64■■■□□ 2.98
HOXA3-204ENST00000521401 CLTCQ00610 1675 aaKnown RBP33.64■■■□□ 2.98
HOXA3-204ENST00000521401 ABCC5O15440 1437 aa33.62■■■□□ 2.97
HOXA3-204ENST00000521401 PTPN23Q9H3S7 1636 aa33.61■■■□□ 2.97
HOXA3-204ENST00000521401 TCOF1Q13428 1488 aaKnown RBP33.61■■■□□ 2.97
HOXA3-204ENST00000521401 PTPRKQ15262 1439 aa33.6■■■□□ 2.97
HOXA3-204ENST00000521401 ILDR1Q86SU0 546 aaPredicted RBP33.55■■■□□ 2.96
HOXA3-204ENST00000521401 DAPK1P53355 1430 aa33.53■■■□□ 2.96
HOXA3-204ENST00000521401 SHANK2Q9UPX8 1470 aa33.53■■■□□ 2.96
HOXA3-204ENST00000521401 FAM135AQ9P2D6 1515 aa33.51■■■□□ 2.95
HOXA3-204ENST00000521401 KDM5DQ9BY66 1539 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms