RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 RIMS1Q86UR5 1692 aaKnown RBP33.46■■■□□ 2.95
SNHG6-205ENST00000521399 MYO5CQ9NQX4 1742 aa33.45■■■□□ 2.95
SNHG6-205ENST00000521399 EFCAB2Q5VUJ9 269 aa33.44■■■□□ 2.94
SNHG6-205ENST00000521399 SIGLEC1Q9BZZ2 1709 aa33.43■■■□□ 2.94
SNHG6-205ENST00000521399 PCF11O94913 1555 aaKnown RBP33.42■■■□□ 2.94
SNHG6-205ENST00000521399 KIF14Q15058 1648 aa33.42■■■□□ 2.94
SNHG6-205ENST00000521399 TROQ12816 1431 aaPredicted RBP33.41■■■□□ 2.94
SNHG6-205ENST00000521399 LMTK3Q96Q04 1460 aa33.38■■■□□ 2.93
SNHG6-205ENST00000521399 LRRIQ1Q96JM4 1722 aa33.37■■■□□ 2.93
SNHG6-205ENST00000521399 CLIP1P30622 1438 aa33.35■■■□□ 2.93
SNHG6-205ENST00000521399 ATP10AO60312 1499 aa33.32■■■□□ 2.92
SNHG6-205ENST00000521399 MLECQ14165 292 aa33.31■■■□□ 2.92
SNHG6-205ENST00000521399 ARHGAP5Q13017 1502 aa33.31■■■□□ 2.92
SNHG6-205ENST00000521399 C9orf84Q5VXU9 1444 aa33.28■■■□□ 2.92
SNHG6-205ENST00000521399 PLPPR3Q6T4P5 718 aa33.28■■■□□ 2.92
SNHG6-205ENST00000521399 ZNF518AQ6AHZ1 1483 aa33.28■■■□□ 2.92
SNHG6-205ENST00000521399 FER1L4A9Z1Z3 1794 aa33.27■■■□□ 2.92
SNHG6-205ENST00000521399 CASKIN1Q8WXD9 1431 aa33.26■■■□□ 2.91
SNHG6-205ENST00000521399 KDM5CP41229 1560 aa33.23■■■□□ 2.91
SNHG6-205ENST00000521399 AFAP1Q8N556 730 aa33.23■■■□□ 2.91
SNHG6-205ENST00000521399 CCDC18Q5T9S5 1454 aa33.23■■■□□ 2.91
SNHG6-205ENST00000521399 ARHGEF12Q9NZN5 1544 aa33.23■■■□□ 2.91
SNHG6-205ENST00000521399 CDC42BPBQ9Y5S2 1711 aa33.22■■■□□ 2.91
SNHG6-205ENST00000521399 FBXO41Q8TF61 875 aa33.2■■■□□ 2.91
SNHG6-205ENST00000521399 HSPA2P54652 639 aa33.19■■■□□ 2.9
SNHG6-205ENST00000521399 PREX2Q70Z35 1606 aa33.16■■■□□ 2.9
SNHG6-205ENST00000521399 MYT1LQ9UL68 1186 aa33.13■■■□□ 2.89
SNHG6-205ENST00000521399 DIP2CQ9Y2E4 1556 aa33.11■■■□□ 2.89
SNHG6-205ENST00000521399 FYCO1Q9BQS8 1478 aa33.11■■■□□ 2.89
SNHG6-205ENST00000521399 MLH3Q9UHC1 1453 aa33.11■■■□□ 2.89
SNHG6-205ENST00000521399 ABCC1P33527 1531 aa33.1■■■□□ 2.89
SNHG6-205ENST00000521399 REREQ9P2R6 1566 aa33.09■■■□□ 2.89
SNHG6-205ENST00000521399 TRAPPC8Q9Y2L5 1435 aa33.08■■■□□ 2.89
SNHG6-205ENST00000521399 CDC42BPAQ5VT25 1732 aa33.06■■■□□ 2.88
SNHG6-205ENST00000521399 ABCA6Q8N139 1617 aa33.06■■■□□ 2.88
SNHG6-205ENST00000521399 ITSN2Q9NZM3 1697 aa33.05■■■□□ 2.88
SNHG6-205ENST00000521399 CEBPAP49715 358 aaPredicted RBP33.05■■■□□ 2.88
SNHG6-205ENST00000521399 PREX1Q8TCU6 1659 aa33.02■■■□□ 2.88
SNHG6-205ENST00000521399 SETD1BQ9UPS6 1966 aaKnown RBP32.98■■■□□ 2.87
SNHG6-205ENST00000521399 AGLP35573 1532 aa32.97■■■□□ 2.87
SNHG6-205ENST00000521399 KIDINS220Q9ULH0 1771 aa32.96■■■□□ 2.87
SNHG6-205ENST00000521399 GPATCH8Q9UKJ3 1502 aaKnown RBP32.93■■■□□ 2.86
SNHG6-205ENST00000521399 ZNF777Q9ULD5 760 aaPredicted RBP32.93■■■□□ 2.86
SNHG6-205ENST00000521399 SAMD9LQ8IVG5 1584 aa32.92■■■□□ 2.86
SNHG6-205ENST00000521399 UHRF1BP1Q6BDS2 1440 aa32.89■■■□□ 2.86
SNHG6-205ENST00000521399 ESF1Q9H501 851 aaKnown RBP32.88■■■□□ 2.85
SNHG6-205ENST00000521399 C3P01024 1663 aa32.88■■■□□ 2.85
SNHG6-205ENST00000521399 SYCP2Q9BX26 1530 aa32.87■■■□□ 2.85
SNHG6-205ENST00000521399 HNRNPMP52272 730 aaKnown RBP eCLIP32.84■■■□□ 2.85
SNHG6-205ENST00000521399 CERKQ8TCT0 537 aa32.84■■■□□ 2.85
SNHG6-205ENST00000521399 SPAG9O60271 1321 aaKnown RBP32.82■■■□□ 2.84
SNHG6-205ENST00000521399 CFDP1Q9UEE9 299 aaPredicted RBP32.82■■■□□ 2.84
SNHG6-205ENST00000521399 KIAA1107Q9UPP5 1409 aa32.82■■■□□ 2.84
SNHG6-205ENST00000521399 STRCQ7RTU9 1775 aa32.81■■■□□ 2.84
SNHG6-205ENST00000521399 CCNB3Q8WWL7 1395 aa32.81■■■□□ 2.84
SNHG6-205ENST00000521399 CNTLNQ9NXG0 1405 aa32.8■■■□□ 2.84
SNHG6-205ENST00000521399 MTUS2Q5JR59 1369 aa32.8■■■□□ 2.84
SNHG6-205ENST00000521399 PLEKHH2Q8IVE3 1493 aa32.8■■■□□ 2.84
SNHG6-205ENST00000521399 DMRT2Q9Y5R5 561 aa32.79■■■□□ 2.84
SNHG6-205ENST00000521399 ATP7AQ04656 1500 aa32.75■■■□□ 2.83
SNHG6-205ENST00000521399 SUPT6HQ7KZ85 1726 aaKnown RBP32.72■■■□□ 2.83
SNHG6-205ENST00000521399 INO80Q9ULG1 1556 aaPredicted RBP32.72■■■□□ 2.83
SNHG6-205ENST00000521399 MROH2AA6NES4 1674 aa32.69■■■□□ 2.82
SNHG6-205ENST00000521399 EHBP1L1Q8N3D4 1523 aa32.67■■■□□ 2.82
SNHG6-205ENST00000521399 PLXNC1O60486 1568 aa32.67■■■□□ 2.82
SNHG6-205ENST00000521399 TIAM1Q13009 1591 aa32.67■■■□□ 2.82
SNHG6-205ENST00000521399 A2MP01023 1474 aa32.67■■■□□ 2.82
SNHG6-205ENST00000521399 ZMYM3Q14202 1370 aa32.66■■■□□ 2.82
SNHG6-205ENST00000521399 NPATQ14207 1427 aa32.65■■■□□ 2.82
SNHG6-205ENST00000521399 CEP162Q5TB80 1403 aa32.65■■■□□ 2.82
SNHG6-205ENST00000521399 PTPRTO14522 1441 aa32.64■■■□□ 2.82
SNHG6-205ENST00000521399 ZNF644Q9H582 1327 aaPredicted RBP32.64■■■□□ 2.82
SNHG6-205ENST00000521399 MBD5Q9P267 1494 aa32.6■■■□□ 2.81
SNHG6-205ENST00000521399 CLTCQ00610 1675 aaKnown RBP32.59■■■□□ 2.81
SNHG6-205ENST00000521399 ADGBQ8N7X0 1667 aa32.58■■■□□ 2.81
SNHG6-205ENST00000521399 NCOA1Q15788 1441 aa32.58■■■□□ 2.81
SNHG6-205ENST00000521399 GGT6Q6P531 493 aa32.56■■■□□ 2.8
SNHG6-205ENST00000521399 RTEL1-TNFRSF6BF6WH68 1400 aa32.53■■■□□ 2.8
SNHG6-205ENST00000521399 PPP6R1Q9UPN7 881 aa32.53■■■□□ 2.8
SNHG6-205ENST00000521399 CAMSAP1Q5T5Y3 1602 aa32.51■■■□□ 2.8
SNHG6-205ENST00000521399 PTPRKQ15262 1439 aa32.5■■■□□ 2.79
SNHG6-205ENST00000521399 NCOA2Q15596 1464 aa32.48■■■□□ 2.79
SNHG6-205ENST00000521399 DHX29Q7Z478 1369 aaKnown RBP32.46■■■□□ 2.79
SNHG6-205ENST00000521399 LTBP4Q8N2S1 1624 aa32.45■■■□□ 2.79
SNHG6-205ENST00000521399 MYO3AQ8NEV4 1616 aa32.45■■■□□ 2.79
SNHG6-205ENST00000521399 ZNF142P52746 1687 aaPredicted RBP32.45■■■□□ 2.79
SNHG6-205ENST00000521399 CCDC141Q6ZP82 1450 aa32.43■■■□□ 2.78
SNHG6-205ENST00000521399 CAMSAP2Q08AD1 1489 aa32.42■■■□□ 2.78
SNHG6-205ENST00000521399 RSPH4AQ5TD94 716 aa32.41■■■□□ 2.78
SNHG6-205ENST00000521399 CEP170BQ9Y4F5 1589 aaPredicted RBP32.41■■■□□ 2.78
SNHG6-205ENST00000521399 NCKAP5LQ9HCH0 1330 aa32.4■■■□□ 2.78
SNHG6-205ENST00000521399 PLA2R1Q13018 1463 aa32.39■■■□□ 2.78
SNHG6-205ENST00000521399 PKD2Q13563 968 aa32.36■■■□□ 2.77
SNHG6-205ENST00000521399 KIF3BO15066 747 aa32.35■■■□□ 2.77
SNHG6-205ENST00000521399 IQSEC2Q5JU85 1478 aa32.35■■■□□ 2.77
SNHG6-205ENST00000521399 TCOF1Q13428 1488 aaKnown RBP32.33■■■□□ 2.77
SNHG6-205ENST00000521399 VPS8Q8N3P4 1428 aa32.33■■■□□ 2.77
SNHG6-205ENST00000521399 ARHGEF5Q12774 1597 aa32.32■■■□□ 2.76
SNHG6-205ENST00000521399 LRRC9Q6ZRR7 1453 aa32.3■■■□□ 2.76
SNHG6-205ENST00000521399 LOC105371045A0A1W2PR82 267 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms