RNA–Protein interactions for RNA: ENST00000521339.5

GABRA1-207, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-207ENST00000521339 RAPGEF3O95398 923 aa16.77■□□□□ 0.28
GABRA1-207ENST00000521339 DENND4BO75064 1496 aaPredicted RBP16.76■□□□□ 0.27
GABRA1-207ENST00000521339 ADGRL1O94910 1474 aa16.76■□□□□ 0.27
GABRA1-207ENST00000521339 EFCAB2Q5VUJ9 269 aa16.76■□□□□ 0.27
GABRA1-207ENST00000521339 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
GABRA1-207ENST00000521339 SCAPERQ9BY12 1400 aa16.72■□□□□ 0.27
GABRA1-207ENST00000521339 ITSN2Q9NZM3 1697 aa16.71■□□□□ 0.27
GABRA1-207ENST00000521339 GPATCH8Q9UKJ3 1502 aaKnown RBP16.7■□□□□ 0.26
GABRA1-207ENST00000521339 CCNB3Q8WWL7 1395 aa16.7■□□□□ 0.26
GABRA1-207ENST00000521339 POGZQ7Z3K3 1410 aa16.7■□□□□ 0.26
GABRA1-207ENST00000521339 LRRC9Q6ZRR7 1453 aa16.69■□□□□ 0.26
GABRA1-207ENST00000521339 ABCC1P33527 1531 aa16.69■□□□□ 0.26
GABRA1-207ENST00000521339 MAP3K1Q13233 1512 aa16.69■□□□□ 0.26
GABRA1-207ENST00000521339 ZMYM4Q5VZL5 1548 aa16.68■□□□□ 0.26
GABRA1-207ENST00000521339 SAMD9LQ8IVG5 1584 aa16.68■□□□□ 0.26
GABRA1-207ENST00000521339 ARHGEF40Q8TER5 1519 aa16.67■□□□□ 0.26
GABRA1-207ENST00000521339 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
GABRA1-207ENST00000521339 NCOA2Q15596 1464 aa16.67■□□□□ 0.26
GABRA1-207ENST00000521339 APLP2Q06481 763 aa16.66■□□□□ 0.26
GABRA1-207ENST00000521339 ZNF518AQ6AHZ1 1483 aa16.66■□□□□ 0.26
GABRA1-207ENST00000521339 CFDP1Q9UEE9 299 aaPredicted RBP16.65■□□□□ 0.26
GABRA1-207ENST00000521339 ZFYVE16Q7Z3T8 1539 aa16.65■□□□□ 0.26
GABRA1-207ENST00000521339 KANK4Q5T7N3 995 aaPredicted RBP16.63■□□□□ 0.25
GABRA1-207ENST00000521339 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
GABRA1-207ENST00000521339 SYCP2Q9BX26 1530 aa16.63■□□□□ 0.25
GABRA1-207ENST00000521339 ARHGEF12Q9NZN5 1544 aa16.63■□□□□ 0.25
GABRA1-207ENST00000521339 KDM5CP41229 1560 aa16.63■□□□□ 0.25
GABRA1-207ENST00000521339 MAGI2Q86UL8 1455 aa16.62■□□□□ 0.25
GABRA1-207ENST00000521339 HECW2Q9P2P5 1572 aa16.61■□□□□ 0.25
GABRA1-207ENST00000521339 AFAP1Q8N556 730 aa16.61■□□□□ 0.25
GABRA1-207ENST00000521339 YEATS2Q9ULM3 1422 aa16.61■□□□□ 0.25
GABRA1-207ENST00000521339 TRAPPC8Q9Y2L5 1435 aa16.61■□□□□ 0.25
GABRA1-207ENST00000521339 KDM4FA0A1W2PPD8 638 aa16.6■□□□□ 0.25
GABRA1-207ENST00000521339 PLEKHH2Q8IVE3 1493 aa16.6■□□□□ 0.25
GABRA1-207ENST00000521339 MYT1LQ9UL68 1186 aa16.59■□□□□ 0.25
GABRA1-207ENST00000521339 SIGLEC1Q9BZZ2 1709 aa16.57■□□□□ 0.24
GABRA1-207ENST00000521339 HNRNPMP52272 730 aaKnown RBP eCLIP16.57■□□□□ 0.24
GABRA1-207ENST00000521339 KIAA1107Q9UPP5 1409 aa16.56■□□□□ 0.24
GABRA1-207ENST00000521339 ARID4BQ4LE39 1312 aaPredicted RBP16.56■□□□□ 0.24
GABRA1-207ENST00000521339 ZNF644Q9H582 1327 aaPredicted RBP16.56■□□□□ 0.24
GABRA1-207ENST00000521339 ABCA6Q8N139 1617 aa16.56■□□□□ 0.24
GABRA1-207ENST00000521339 KIDINS220Q9ULH0 1771 aa16.55■□□□□ 0.24
GABRA1-207ENST00000521339 BCORL1Q5H9F3 1711 aa16.55■□□□□ 0.24
GABRA1-207ENST00000521339 DIP2CQ9Y2E4 1556 aa16.55■□□□□ 0.24
GABRA1-207ENST00000521339 CAMSAP2Q08AD1 1489 aa16.54■□□□□ 0.24
GABRA1-207ENST00000521339 MLH3Q9UHC1 1453 aa16.54■□□□□ 0.24
GABRA1-207ENST00000521339 ATP10AO60312 1499 aa16.54■□□□□ 0.24
GABRA1-207ENST00000521339 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
GABRA1-207ENST00000521339 MYOM3Q5VTT5 1437 aa16.52■□□□□ 0.23
GABRA1-207ENST00000521339 INO80Q9ULG1 1556 aaPredicted RBP16.51■□□□□ 0.23
GABRA1-207ENST00000521339 ADAMTSL3P82987 1691 aa16.51■□□□□ 0.23
GABRA1-207ENST00000521339 ATP7AQ04656 1500 aa16.5■□□□□ 0.23
GABRA1-207ENST00000521339 SPAG9O60271 1321 aaKnown RBP16.5■□□□□ 0.23
GABRA1-207ENST00000521339 MBD5Q9P267 1494 aa16.5■□□□□ 0.23
GABRA1-207ENST00000521339 MADDQ8WXG6 1647 aa16.48■□□□□ 0.23
GABRA1-207ENST00000521339 REREQ9P2R6 1566 aa16.48■□□□□ 0.23
GABRA1-207ENST00000521339 MIA2Q96PC5 1412 aa16.48■□□□□ 0.23
GABRA1-207ENST00000521339 CCDC141Q6ZP82 1450 aa16.48■□□□□ 0.23
GABRA1-207ENST00000521339 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
GABRA1-207ENST00000521339 PTPN23Q9H3S7 1636 aa16.46■□□□□ 0.23
GABRA1-207ENST00000521339 RIMS1Q86UR5 1692 aaKnown RBP16.46■□□□□ 0.23
GABRA1-207ENST00000521339 FER1L4A9Z1Z3 1794 aa16.46■□□□□ 0.22
GABRA1-207ENST00000521339 MLECQ14165 292 aa16.45■□□□□ 0.22
GABRA1-207ENST00000521339 ADGBQ8N7X0 1667 aa16.45■□□□□ 0.22
GABRA1-207ENST00000521339 FGD6Q6ZV73 1430 aa16.43■□□□□ 0.22
GABRA1-207ENST00000521339 RSPH4AQ5TD94 716 aa16.42■□□□□ 0.22
GABRA1-207ENST00000521339 AGLP35573 1532 aa16.41■□□□□ 0.22
GABRA1-207ENST00000521339 RTEL1-TNFRSF6BF6WH68 1400 aa16.41■□□□□ 0.22
GABRA1-207ENST00000521339 PTPRMP28827 1452 aa16.41■□□□□ 0.22
GABRA1-207ENST00000521339 CROCC2H7BZ55 1655 aa16.4■□□□□ 0.22
GABRA1-207ENST00000521339 PLXNC1O60486 1568 aa16.4■□□□□ 0.22
GABRA1-207ENST00000521339 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
GABRA1-207ENST00000521339 A2MP01023 1474 aa16.4■□□□□ 0.22
GABRA1-207ENST00000521339 TSPY4P0CV99 314 aa16.39■□□□□ 0.21
GABRA1-207ENST00000521339 TSPY10P0CW01 314 aa16.39■□□□□ 0.21
GABRA1-207ENST00000521339 MAST1Q9Y2H9 1570 aa16.38■□□□□ 0.21
GABRA1-207ENST00000521339 TCOF1Q13428 1488 aaKnown RBP16.38■□□□□ 0.21
GABRA1-207ENST00000521339 DNMT1P26358 1616 aaKnown RBP16.37■□□□□ 0.21
GABRA1-207ENST00000521339 PLPPR3Q6T4P5 718 aa16.35■□□□□ 0.21
GABRA1-207ENST00000521339 ABCC5O15440 1437 aa16.33■□□□□ 0.2
GABRA1-207ENST00000521339 DAPK1P53355 1430 aa16.33■□□□□ 0.2
GABRA1-207ENST00000521339 FAM50AQ14320 339 aaKnown RBP16.32■□□□□ 0.2
GABRA1-207ENST00000521339 DHX29Q7Z478 1369 aaKnown RBP16.32■□□□□ 0.2
GABRA1-207ENST00000521339 SHANK2Q9UPX8 1470 aa16.32■□□□□ 0.2
GABRA1-207ENST00000521339 ESF1Q9H501 851 aaKnown RBP16.31■□□□□ 0.2
GABRA1-207ENST00000521339 C3P01024 1663 aa16.3■□□□□ 0.2
GABRA1-207ENST00000521339 CLTCQ00610 1675 aaKnown RBP16.3■□□□□ 0.2
GABRA1-207ENST00000521339 GGT6Q6P531 493 aa16.29■□□□□ 0.2
GABRA1-207ENST00000521339 MROH2AA6NES4 1674 aa16.28■□□□□ 0.2
GABRA1-207ENST00000521339 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.2
GABRA1-207ENST00000521339 KIF3BO15066 747 aa16.27■□□□□ 0.2
GABRA1-207ENST00000521339 CNTLNQ9NXG0 1405 aa16.27■□□□□ 0.19
GABRA1-207ENST00000521339 DUOX2Q9NRD8 1548 aa16.26■□□□□ 0.19
GABRA1-207ENST00000521339 CEBPAP49715 358 aaPredicted RBP16.26■□□□□ 0.19
GABRA1-207ENST00000521339 CHIC2Q9UKJ5 165 aa16.26■□□□□ 0.19
GABRA1-207ENST00000521339 KIF15Q9NS87 1388 aa16.25■□□□□ 0.19
GABRA1-207ENST00000521339 RRP7BPQ9NSQ0 103 aa16.24■□□□□ 0.19
GABRA1-207ENST00000521339 RNF17Q9BXT8 1623 aaKnown RBP16.23■□□□□ 0.19
GABRA1-207ENST00000521339 PREX1Q8TCU6 1659 aa16.23■□□□□ 0.19
GABRA1-207ENST00000521339 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms