RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 RIMBP2O15034 1052 aa10.82□□□□□ -0.68
PCM1-214ENST00000521338 VARS2Q5ST30 1063 aaKnown RBP10.81□□□□□ -0.68
PCM1-214ENST00000521338 FBXO22Q8NEZ5 403 aa10.81□□□□□ -0.68
PCM1-214ENST00000521338 ZNF687Q8N1G0 1237 aa10.77□□□□□ -0.69
PCM1-214ENST00000521338 NLRP6P59044 892 aa10.76□□□□□ -0.69
PCM1-214ENST00000521338 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
PCM1-214ENST00000521338 MFRPQ9BY79 579 aa10.74□□□□□ -0.69
PCM1-214ENST00000521338 ARSIQ5FYB1 569 aa10.73□□□□□ -0.69
PCM1-214ENST00000521338 KIF3CO14782 793 aa10.71□□□□□ -0.69
PCM1-214ENST00000521338 KHSRPQ92945 711 aaKnown RBP eCLIP10.7□□□□□ -0.7
PCM1-214ENST00000521338 STK24Q9Y6E0 443 aa10.7□□□□□ -0.7
PCM1-214ENST00000521338 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
PCM1-214ENST00000521338 TAOK2Q9UL54 1235 aa10.68□□□□□ -0.7
PCM1-214ENST00000521338 MYT1LQ9UL68 1186 aa10.66□□□□□ -0.7
PCM1-214ENST00000521338 C2orf72A6NCS6 295 aa10.65□□□□□ -0.7
PCM1-214ENST00000521338 ZNF316A6NFI3 1004 aaPredicted RBP10.65□□□□□ -0.7
PCM1-214ENST00000521338 STK25O00506 426 aa10.65□□□□□ -0.7
PCM1-214ENST00000521338 PKD2Q13563 968 aa10.63□□□□□ -0.71
PCM1-214ENST00000521338 ECM2O94769 699 aaPredicted RBP10.62□□□□□ -0.71
PCM1-214ENST00000521338 RGL2O15211 777 aa10.6□□□□□ -0.71
PCM1-214ENST00000521338 SLC34A2O95436 690 aa10.58□□□□□ -0.72
PCM1-214ENST00000521338 PTGER2P43116 358 aa10.58□□□□□ -0.72
PCM1-214ENST00000521338 NUDT7P0C024 238 aa10.57□□□□□ -0.72
PCM1-214ENST00000521338 POTEEQ6S8J3 1075 aa10.57□□□□□ -0.72
PCM1-214ENST00000521338 LSM11P83369 360 aaKnown RBP eCLIP10.56□□□□□ -0.72
PCM1-214ENST00000521338 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
PCM1-214ENST00000521338 PPP1R37O75864 691 aa10.55□□□□□ -0.72
PCM1-214ENST00000521338 PCDHGA4Q9Y5G9 962 aa10.55□□□□□ -0.72
PCM1-214ENST00000521338 LHX6Q9UPM6 363 aa10.54□□□□□ -0.72
PCM1-214ENST00000521338 KDM4FA0A1W2PPD8 638 aa10.5□□□□□ -0.73
PCM1-214ENST00000521338 PBX2P40425 430 aa10.5□□□□□ -0.73
PCM1-214ENST00000521338 TMC2Q8TDI7 906 aa10.49□□□□□ -0.73
PCM1-214ENST00000521338 AXIN2Q9Y2T1 843 aa10.48□□□□□ -0.73
PCM1-214ENST00000521338 PTCD2Q8WV60 388 aaKnown RBP10.44□□□□□ -0.74
PCM1-214ENST00000521338 FOXK1P85037 733 aa10.41□□□□□ -0.74
PCM1-214ENST00000521338 ARHGAP33O14559 1287 aa10.39□□□□□ -0.75
PCM1-214ENST00000521338 ADGRD1Q6QNK2 874 aa10.38□□□□□ -0.75
PCM1-214ENST00000521338 PLPP6Q8IY26 295 aa10.38□□□□□ -0.75
PCM1-214ENST00000521338 GPHNQ9NQX3 736 aaPredicted RBP10.38□□□□□ -0.75
PCM1-214ENST00000521338 PSDA5PKW4 1024 aaPredicted RBP10.37□□□□□ -0.75
PCM1-214ENST00000521338 HS6ST3Q8IZP7 471 aa10.37□□□□□ -0.75
PCM1-214ENST00000521338 HRO43593 1189 aa10.35□□□□□ -0.75
PCM1-214ENST00000521338 DSG2Q14126 1118 aa10.35□□□□□ -0.75
PCM1-214ENST00000521338 DMRTA1Q5VZB9 504 aa10.35□□□□□ -0.75
PCM1-214ENST00000521338 TK2O00142 265 aa10.33□□□□□ -0.76
PCM1-214ENST00000521338 PSEN2P49810 448 aa10.33□□□□□ -0.76
PCM1-214ENST00000521338 HCSTQ9UBK5 93 aa10.31□□□□□ -0.76
PCM1-214ENST00000521338 NKX1-1Q15270 411 aaPredicted RBP10.29□□□□□ -0.76
PCM1-214ENST00000521338 DNAJC5Q9H3Z4 198 aa10.29□□□□□ -0.76
PCM1-214ENST00000521338 PLA2G2EQ9NZK7 142 aa10.29□□□□□ -0.76
PCM1-214ENST00000521338 PPP4R3BQ5MIZ7 849 aa10.27□□□□□ -0.77
PCM1-214ENST00000521338 TBC1D12O60347 775 aa10.26□□□□□ -0.77
PCM1-214ENST00000521338 OXER1Q8TDS5 423 aa10.26□□□□□ -0.77
PCM1-214ENST00000521338 CHGAP10645 457 aaKnown RBP10.25□□□□□ -0.77
PCM1-214ENST00000521338 CRISPLD2Q9H0B8 497 aa10.24□□□□□ -0.77
PCM1-214ENST00000521338 KCNK17Q96T54 332 aa10.2□□□□□ -0.78
PCM1-214ENST00000521338 VPS9D1Q9Y2B5 631 aa10.2□□□□□ -0.78
PCM1-214ENST00000521338 KCTD12Q96CX2 325 aaKnown RBP10.19□□□□□ -0.78
PCM1-214ENST00000521338 NCKAP5LQ9HCH0 1330 aa10.18□□□□□ -0.78
PCM1-214ENST00000521338 UPF1Q92900 1129 aaKnown RBP eCLIP10.18□□□□□ -0.78
PCM1-214ENST00000521338 BCL2L12Q9HB09 334 aa10.17□□□□□ -0.78
PCM1-214ENST00000521338 PPP1R15BQ5SWA1 713 aa10.16□□□□□ -0.78
PCM1-214ENST00000521338 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
PCM1-214ENST00000521338 ANO8Q9HCE9 1232 aaPredicted RBP10.16□□□□□ -0.78
PCM1-214ENST00000521338 BHMG1C9JSJ3 638 aaPredicted RBP10.15□□□□□ -0.78
PCM1-214ENST00000521338 FOSBP53539 338 aa10.15□□□□□ -0.78
PCM1-214ENST00000521338 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
PCM1-214ENST00000521338 RYDENQ9NUL5 291 aaKnown RBP10.13□□□□□ -0.79
PCM1-214ENST00000521338 KCNH8Q96L42 1107 aa10.11□□□□□ -0.79
PCM1-214ENST00000521338 STAC3Q96MF2 364 aa10.11□□□□□ -0.79
PCM1-214ENST00000521338 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
PCM1-214ENST00000521338 PDE4AP27815 886 aa10.1□□□□□ -0.79
PCM1-214ENST00000521338 ZBED2Q9BTP6 218 aa10.1□□□□□ -0.79
PCM1-214ENST00000521338 EVI5O60447 810 aa10.08□□□□□ -0.8
PCM1-214ENST00000521338 JPH4Q96JJ6 628 aa10.08□□□□□ -0.8
PCM1-214ENST00000521338 PTPREP23469 700 aa10.07□□□□□ -0.8
PCM1-214ENST00000521338 PTPN5P54829 565 aa10.07□□□□□ -0.8
PCM1-214ENST00000521338 THSD4Q6ZMP0 1018 aa10.06□□□□□ -0.8
PCM1-214ENST00000521338 ADAM33Q9BZ11 813 aa10.06□□□□□ -0.8
PCM1-214ENST00000521338 MFSD10Q14728 455 aa10.05□□□□□ -0.8
PCM1-214ENST00000521338 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
PCM1-214ENST00000521338 ZDHHC16Q969W1 377 aa10.04□□□□□ -0.8
PCM1-214ENST00000521338 LARP6Q9BRS8 491 aaKnown RBP10.04□□□□□ -0.8
PCM1-214ENST00000521338 DDX27Q96GQ7 796 aaKnown RBP10.02□□□□□ -0.81
PCM1-214ENST00000521338 EMILIN3Q9NT22 766 aa10.02□□□□□ -0.81
PCM1-214ENST00000521338 WNT2BQ93097 391 aa10□□□□□ -0.81
PCM1-214ENST00000521338 MRPL50Q8N5N7 158 aaKnown RBP9.99□□□□□ -0.81
PCM1-214ENST00000521338 PCDHGA10Q9Y5H3 936 aa9.99□□□□□ -0.81
PCM1-214ENST00000521338 MAP3K9P80192 1104 aa9.98□□□□□ -0.81
PCM1-214ENST00000521338 RGS20O76081 388 aa9.96□□□□□ -0.82
PCM1-214ENST00000521338 GOLGA8CPA6NN73 597 aa9.95□□□□□ -0.82
PCM1-214ENST00000521338 PPP1R3GB7ZBB8 358 aa9.95□□□□□ -0.82
PCM1-214ENST00000521338 COL9A1P20849 921 aa9.95□□□□□ -0.82
PCM1-214ENST00000521338 CADPS2Q86UW7 1296 aa9.95□□□□□ -0.82
PCM1-214ENST00000521338 NBPF3Q9H094 633 aa9.95□□□□□ -0.82
PCM1-214ENST00000521338 A0A0G2JS52 829 aa9.94□□□□□ -0.82
PCM1-214ENST00000521338 PROX2Q3B8N5 592 aa9.93□□□□□ -0.82
PCM1-214ENST00000521338 RABGEF1Q9UJ41 708 aa9.93□□□□□ -0.82
PCM1-214ENST00000521338 PHF14O94880 888 aa9.9□□□□□ -0.82
PCM1-214ENST00000521338 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms