RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 KDM4FA0A1W2PPD8 638 aa32.8■■■□□ 2.84
TRIM35-203ENST00000521253 RICTORQ6R327 1708 aa32.78■■■□□ 2.84
TRIM35-203ENST00000521253 PREX2Q70Z35 1606 aa32.77■■■□□ 2.84
TRIM35-203ENST00000521253 CDC42BPBQ9Y5S2 1711 aa32.76■■■□□ 2.83
TRIM35-203ENST00000521253 EHBP1L1Q8N3D4 1523 aa32.75■■■□□ 2.83
TRIM35-203ENST00000521253 POGZQ7Z3K3 1410 aa32.75■■■□□ 2.83
TRIM35-203ENST00000521253 GPATCH8Q9UKJ3 1502 aaKnown RBP32.73■■■□□ 2.83
TRIM35-203ENST00000521253 CDC42BPAQ5VT25 1732 aa32.71■■■□□ 2.83
TRIM35-203ENST00000521253 TIAM1Q13009 1591 aa32.71■■■□□ 2.83
TRIM35-203ENST00000521253 ZMYM4Q5VZL5 1548 aa32.7■■■□□ 2.83
TRIM35-203ENST00000521253 CCNB3Q8WWL7 1395 aa32.69■■■□□ 2.82
TRIM35-203ENST00000521253 ARHGEF40Q8TER5 1519 aa32.64■■■□□ 2.82
TRIM35-203ENST00000521253 ABCC1P33527 1531 aa32.63■■■□□ 2.81
TRIM35-203ENST00000521253 ZNF518AQ6AHZ1 1483 aa32.63■■■□□ 2.81
TRIM35-203ENST00000521253 MAGI2Q86UL8 1455 aa32.63■■■□□ 2.81
TRIM35-203ENST00000521253 AFAP1Q8N556 730 aa32.63■■■□□ 2.81
TRIM35-203ENST00000521253 ZNF777Q9ULD5 760 aaPredicted RBP32.63■■■□□ 2.81
TRIM35-203ENST00000521253 YEATS2Q9ULM3 1422 aa32.62■■■□□ 2.81
TRIM35-203ENST00000521253 CFDP1Q9UEE9 299 aaPredicted RBP32.62■■■□□ 2.81
TRIM35-203ENST00000521253 ARHGEF12Q9NZN5 1544 aa32.61■■■□□ 2.81
TRIM35-203ENST00000521253 MAP3K1Q13233 1512 aa32.61■■■□□ 2.81
TRIM35-203ENST00000521253 ZFYVE16Q7Z3T8 1539 aa32.61■■■□□ 2.81
TRIM35-203ENST00000521253 LRRC9Q6ZRR7 1453 aa32.61■■■□□ 2.81
TRIM35-203ENST00000521253 NCOA2Q15596 1464 aa32.58■■■□□ 2.81
TRIM35-203ENST00000521253 TRAPPC8Q9Y2L5 1435 aa32.58■■■□□ 2.81
TRIM35-203ENST00000521253 SAMD9LQ8IVG5 1584 aa32.58■■■□□ 2.81
TRIM35-203ENST00000521253 KDM5CP41229 1560 aa32.57■■■□□ 2.8
TRIM35-203ENST00000521253 KANK4Q5T7N3 995 aaPredicted RBP32.56■■■□□ 2.8
TRIM35-203ENST00000521253 SUPT6HQ7KZ85 1726 aaKnown RBP32.54■■■□□ 2.8
TRIM35-203ENST00000521253 ITSN2Q9NZM3 1697 aa32.53■■■□□ 2.8
TRIM35-203ENST00000521253 ARID4BQ4LE39 1312 aaPredicted RBP32.51■■■□□ 2.8
TRIM35-203ENST00000521253 SYCP2Q9BX26 1530 aa32.51■■■□□ 2.79
TRIM35-203ENST00000521253 KIAA1107Q9UPP5 1409 aa32.5■■■□□ 2.79
TRIM35-203ENST00000521253 HNRNPMP52272 730 aaKnown RBP eCLIP32.49■■■□□ 2.79
TRIM35-203ENST00000521253 APLP2Q06481 763 aa32.49■■■□□ 2.79
TRIM35-203ENST00000521253 PLEKHH2Q8IVE3 1493 aa32.48■■■□□ 2.79
TRIM35-203ENST00000521253 ZNF644Q9H582 1327 aaPredicted RBP32.48■■■□□ 2.79
TRIM35-203ENST00000521253 MYT1LQ9UL68 1186 aa32.47■■■□□ 2.79
TRIM35-203ENST00000521253 MLH3Q9UHC1 1453 aa32.47■■■□□ 2.79
TRIM35-203ENST00000521253 HECW2Q9P2P5 1572 aa32.46■■■□□ 2.79
TRIM35-203ENST00000521253 ATP10AO60312 1499 aa32.46■■■□□ 2.79
TRIM35-203ENST00000521253 C9orf84Q5VXU9 1444 aa32.43■■■□□ 2.78
TRIM35-203ENST00000521253 SIGLEC1Q9BZZ2 1709 aa32.4■■■□□ 2.78
TRIM35-203ENST00000521253 BCORL1Q5H9F3 1711 aa32.39■■■□□ 2.78
TRIM35-203ENST00000521253 ADAMTSL3P82987 1691 aa32.38■■■□□ 2.77
TRIM35-203ENST00000521253 DIP2CQ9Y2E4 1556 aa32.38■■■□□ 2.77
TRIM35-203ENST00000521253 SPAG9O60271 1321 aaKnown RBP32.37■■■□□ 2.77
TRIM35-203ENST00000521253 MBD5Q9P267 1494 aa32.36■■■□□ 2.77
TRIM35-203ENST00000521253 ABCA6Q8N139 1617 aa32.36■■■□□ 2.77
TRIM35-203ENST00000521253 KIDINS220Q9ULH0 1771 aa32.34■■■□□ 2.77
TRIM35-203ENST00000521253 CAMSAP2Q08AD1 1489 aa32.34■■■□□ 2.77
TRIM35-203ENST00000521253 MLECQ14165 292 aa32.31■■■□□ 2.76
TRIM35-203ENST00000521253 MYOM3Q5VTT5 1437 aa32.3■■■□□ 2.76
TRIM35-203ENST00000521253 MADDQ8WXG6 1647 aa32.29■■■□□ 2.76
TRIM35-203ENST00000521253 REREQ9P2R6 1566 aa32.29■■■□□ 2.76
TRIM35-203ENST00000521253 ATP7AQ04656 1500 aa32.27■■■□□ 2.76
TRIM35-203ENST00000521253 PTPRMP28827 1452 aa32.26■■■□□ 2.75
TRIM35-203ENST00000521253 INO80Q9ULG1 1556 aaPredicted RBP32.26■■■□□ 2.75
TRIM35-203ENST00000521253 MIA2Q96PC5 1412 aa32.25■■■□□ 2.75
TRIM35-203ENST00000521253 CCDC141Q6ZP82 1450 aa32.23■■■□□ 2.75
TRIM35-203ENST00000521253 RSPH4AQ5TD94 716 aa32.21■■■□□ 2.75
TRIM35-203ENST00000521253 AGLP35573 1532 aa32.21■■■□□ 2.75
TRIM35-203ENST00000521253 RTEL1-TNFRSF6BF6WH68 1400 aa32.18■■■□□ 2.74
TRIM35-203ENST00000521253 ARHGEF5Q12774 1597 aa32.17■■■□□ 2.74
TRIM35-203ENST00000521253 RIMS1Q86UR5 1692 aaKnown RBP32.17■■■□□ 2.74
TRIM35-203ENST00000521253 A2MP01023 1474 aa32.14■■■□□ 2.74
TRIM35-203ENST00000521253 TSPY4P0CV99 314 aa32.11■■■□□ 2.73
TRIM35-203ENST00000521253 TSPY10P0CW01 314 aa32.11■■■□□ 2.73
TRIM35-203ENST00000521253 FGD6Q6ZV73 1430 aa32.1■■■□□ 2.73
TRIM35-203ENST00000521253 FER1L4A9Z1Z3 1794 aa32.1■■■□□ 2.73
TRIM35-203ENST00000521253 PLXNC1O60486 1568 aa32.1■■■□□ 2.73
TRIM35-203ENST00000521253 PTPN23Q9H3S7 1636 aa32.07■■■□□ 2.72
TRIM35-203ENST00000521253 PLPPR3Q6T4P5 718 aa32.06■■■□□ 2.72
TRIM35-203ENST00000521253 ADGBQ8N7X0 1667 aa32.05■■■□□ 2.72
TRIM35-203ENST00000521253 DHX29Q7Z478 1369 aaKnown RBP32.03■■■□□ 2.72
TRIM35-203ENST00000521253 TCOF1Q13428 1488 aaKnown RBP32.03■■■□□ 2.72
TRIM35-203ENST00000521253 MAST1Q9Y2H9 1570 aa32■■■□□ 2.71
TRIM35-203ENST00000521253 ESF1Q9H501 851 aaKnown RBP31.99■■■□□ 2.71
TRIM35-203ENST00000521253 CEBPAP49715 358 aaPredicted RBP31.97■■■□□ 2.71
TRIM35-203ENST00000521253 ABCC5O15440 1437 aa31.97■■■□□ 2.71
TRIM35-203ENST00000521253 GGT6Q6P531 493 aa31.95■■■□□ 2.71
TRIM35-203ENST00000521253 PPARGC1BQ86YN6 1023 aaKnown RBP31.95■■■□□ 2.71
TRIM35-203ENST00000521253 DAPK1P53355 1430 aa31.92■■■□□ 2.7
TRIM35-203ENST00000521253 CNTLNQ9NXG0 1405 aa31.92■■■□□ 2.7
TRIM35-203ENST00000521253 SHANK2Q9UPX8 1470 aa31.91■■■□□ 2.7
TRIM35-203ENST00000521253 DNMT1P26358 1616 aaKnown RBP31.9■■■□□ 2.7
TRIM35-203ENST00000521253 KIF3BO15066 747 aa31.9■■■□□ 2.7
TRIM35-203ENST00000521253 FAM50AQ14320 339 aaKnown RBP31.89■■■□□ 2.7
TRIM35-203ENST00000521253 CROCC2H7BZ55 1655 aa31.87■■■□□ 2.69
TRIM35-203ENST00000521253 PPP6R1Q9UPN7 881 aa31.86■■■□□ 2.69
TRIM35-203ENST00000521253 LMTK3Q96Q04 1460 aa31.85■■■□□ 2.69
TRIM35-203ENST00000521253 C3P01024 1663 aa31.83■■■□□ 2.69
TRIM35-203ENST00000521253 ZMYM3Q14202 1370 aa31.82■■■□□ 2.69
TRIM35-203ENST00000521253 KIF15Q9NS87 1388 aa31.81■■■□□ 2.68
TRIM35-203ENST00000521253 CHIC2Q9UKJ5 165 aa31.81■■■□□ 2.68
TRIM35-203ENST00000521253 RRP7BPQ9NSQ0 103 aa31.8■■■□□ 2.68
TRIM35-203ENST00000521253 MROH2AA6NES4 1674 aa31.79■■■□□ 2.68
TRIM35-203ENST00000521253 CLTCQ00610 1675 aaKnown RBP31.79■■■□□ 2.68
TRIM35-203ENST00000521253 DUOX2Q9NRD8 1548 aa31.79■■■□□ 2.68
TRIM35-203ENST00000521253 ANKRD30AQ9BXX3 1397 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms