RNA–Protein interactions for RNA: ENST00000521214.5

SPIDR-213, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-213ENST00000521214 CCDC18Q5T9S5 1454 aa11.32□□□□□ -0.6
SPIDR-213ENST00000521214 SETD5Q9C0A6 1442 aa11.32□□□□□ -0.6
SPIDR-213ENST00000521214 ATP10BO94823 1461 aa11.32□□□□□ -0.6
SPIDR-213ENST00000521214 HECW1Q76N89 1606 aa11.31□□□□□ -0.6
SPIDR-213ENST00000521214 KDM2AQ9Y2K7 1162 aa11.31□□□□□ -0.6
SPIDR-213ENST00000521214 RAPGEF6Q8TEU7 1601 aa11.3□□□□□ -0.6
SPIDR-213ENST00000521214 UACAQ9BZF9 1416 aa11.3□□□□□ -0.6
SPIDR-213ENST00000521214 RGL3Q3MIN7 710 aa11.29□□□□□ -0.6
SPIDR-213ENST00000521214 TSHZ2Q9NRE2 1034 aa11.29□□□□□ -0.6
SPIDR-213ENST00000521214 KIF14Q15058 1648 aa11.27□□□□□ -0.61
SPIDR-213ENST00000521214 TROQ12816 1431 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-213ENST00000521214 ANO8Q9HCE9 1232 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-213ENST00000521214 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-213ENST00000521214 MLECQ14165 292 aa11.25□□□□□ -0.61
SPIDR-213ENST00000521214 EHBP1L1Q8N3D4 1523 aa11.25□□□□□ -0.61
SPIDR-213ENST00000521214 SUPT6HQ7KZ85 1726 aaKnown RBP11.25□□□□□ -0.61
SPIDR-213ENST00000521214 RAPGEF3O95398 923 aa11.25□□□□□ -0.61
SPIDR-213ENST00000521214 CFAP43Q8NDM7 1665 aa11.24□□□□□ -0.61
SPIDR-213ENST00000521214 MPHOSPH9Q99550 1183 aa11.24□□□□□ -0.61
SPIDR-213ENST00000521214 PKD2Q13563 968 aa11.23□□□□□ -0.61
SPIDR-213ENST00000521214 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-213ENST00000521214 FAM69CQ0P6D2 419 aa11.23□□□□□ -0.61
SPIDR-213ENST00000521214 CHGAP10645 457 aaKnown RBP11.22□□□□□ -0.61
SPIDR-213ENST00000521214 GGT6Q6P531 493 aa11.22□□□□□ -0.61
SPIDR-213ENST00000521214 PTPN23Q9H3S7 1636 aa11.22□□□□□ -0.61
SPIDR-213ENST00000521214 TONSLQ96HA7 1378 aa11.22□□□□□ -0.61
SPIDR-213ENST00000521214 EFCAB2Q5VUJ9 269 aa11.21□□□□□ -0.61
SPIDR-213ENST00000521214 SUPT16HQ9Y5B9 1047 aaKnown RBP11.21□□□□□ -0.61
SPIDR-213ENST00000521214 BCANQ96GW7 911 aa11.21□□□□□ -0.62
SPIDR-213ENST00000521214 ARHGAP5Q13017 1502 aa11.21□□□□□ -0.62
SPIDR-213ENST00000521214 GPATCH8Q9UKJ3 1502 aaKnown RBP11.2□□□□□ -0.62
SPIDR-213ENST00000521214 NUP155O75694 1391 aa11.2□□□□□ -0.62
SPIDR-213ENST00000521214 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
SPIDR-213ENST00000521214 ABCC5O15440 1437 aa11.19□□□□□ -0.62
SPIDR-213ENST00000521214 NAIPQ13075 1403 aa11.19□□□□□ -0.62
SPIDR-213ENST00000521214 SENP3-EIF4A1A0A087X0R7 540 aa11.18□□□□□ -0.62
SPIDR-213ENST00000521214 KIF3BO15066 747 aa11.18□□□□□ -0.62
SPIDR-213ENST00000521214 CAMSAP2Q08AD1 1489 aa11.18□□□□□ -0.62
SPIDR-213ENST00000521214 DAPK1P53355 1430 aa11.18□□□□□ -0.62
SPIDR-213ENST00000521214 NUTM2DQ5VT03 806 aaPredicted RBP11.17□□□□□ -0.62
SPIDR-213ENST00000521214 MAP3K1Q13233 1512 aa11.17□□□□□ -0.62
SPIDR-213ENST00000521214 MIER1Q8N108 512 aa11.17□□□□□ -0.62
SPIDR-213ENST00000521214 CCDC136Q96JN2 1154 aa11.17□□□□□ -0.62
SPIDR-213ENST00000521214 SPAG9O60271 1321 aaKnown RBP11.16□□□□□ -0.62
SPIDR-213ENST00000521214 L3MBTL2Q969R5 705 aa11.15□□□□□ -0.62
SPIDR-213ENST00000521214 KDM6BO15054 1643 aa11.15□□□□□ -0.62
SPIDR-213ENST00000521214 KIF15Q9NS87 1388 aa11.15□□□□□ -0.62
SPIDR-213ENST00000521214 ABCA8O94911 1581 aa11.14□□□□□ -0.63
SPIDR-213ENST00000521214 ASXL2Q76L83 1435 aa11.14□□□□□ -0.63
SPIDR-213ENST00000521214 SCAPERQ9BY12 1400 aa11.13□□□□□ -0.63
SPIDR-213ENST00000521214 ANKRD30AQ9BXX3 1397 aa11.13□□□□□ -0.63
SPIDR-213ENST00000521214 CLSPNQ9HAW4 1339 aa11.12□□□□□ -0.63
SPIDR-213ENST00000521214 C9orf84Q5VXU9 1444 aa11.12□□□□□ -0.63
SPIDR-213ENST00000521214 ABCC2Q92887 1545 aa11.11□□□□□ -0.63
SPIDR-213ENST00000521214 DCAF11Q8TEB1 546 aa11.11□□□□□ -0.63
SPIDR-213ENST00000521214 HFM1A2PYH4 1435 aa11.11□□□□□ -0.63
SPIDR-213ENST00000521214 ANKRD50Q9ULJ7 1429 aa11.1□□□□□ -0.63
SPIDR-213ENST00000521214 ARID4BQ4LE39 1312 aaPredicted RBP11.1□□□□□ -0.63
SPIDR-213ENST00000521214 TRAPPC8Q9Y2L5 1435 aa11.1□□□□□ -0.63
SPIDR-213ENST00000521214 SYCP2Q9BX26 1530 aa11.1□□□□□ -0.63
SPIDR-213ENST00000521214 EIF5BO60841 1220 aaKnown RBP11.1□□□□□ -0.63
SPIDR-213ENST00000521214 CLASP1Q7Z460 1538 aa11.1□□□□□ -0.63
SPIDR-213ENST00000521214 TTC37Q6PGP7 1564 aa11.1□□□□□ -0.63
SPIDR-213ENST00000521214 MIA2Q96PC5 1412 aa11.09□□□□□ -0.63
SPIDR-213ENST00000521214 MAPKBP1O60336 1514 aa11.08□□□□□ -0.64
SPIDR-213ENST00000521214 NCOA1Q15788 1441 aa11.08□□□□□ -0.64
SPIDR-213ENST00000521214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.07□□□□□ -0.64
SPIDR-213ENST00000521214 PPP1R15AO75807 674 aaPredicted RBP11.07□□□□□ -0.64
SPIDR-213ENST00000521214 SALL2Q9Y467 1007 aaPredicted RBP11.07□□□□□ -0.64
SPIDR-213ENST00000521214 ZCCHC11Q5TAX3 1644 aaKnown RBP11.06□□□□□ -0.64
SPIDR-213ENST00000521214 CD109Q6YHK3 1445 aa11.06□□□□□ -0.64
SPIDR-213ENST00000521214 ADCY10Q96PN6 1610 aa11.05□□□□□ -0.64
SPIDR-213ENST00000521214 DEKP35659 375 aaKnown RBP11.05□□□□□ -0.64
SPIDR-213ENST00000521214 ABCC10Q5T3U5 1492 aa11.05□□□□□ -0.64
SPIDR-213ENST00000521214 PLEKHH2Q8IVE3 1493 aa11.05□□□□□ -0.64
SPIDR-213ENST00000521214 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.05□□□□□ -0.64
SPIDR-213ENST00000521214 NBPF8Q3BBV2 869 aa11.05□□□□□ -0.64
SPIDR-213ENST00000521214 FANCAO15360 1455 aa11.04□□□□□ -0.64
SPIDR-213ENST00000521214 WDR7Q9Y4E6 1490 aa11.04□□□□□ -0.64
SPIDR-213ENST00000521214 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
SPIDR-213ENST00000521214 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
SPIDR-213ENST00000521214 ARHGEF12Q9NZN5 1544 aa11.03□□□□□ -0.64
SPIDR-213ENST00000521214 AKNAQ7Z591 1439 aa11.03□□□□□ -0.64
SPIDR-213ENST00000521214 CFAP65Q6ZU64 1925 aaKnown RBP11.02□□□□□ -0.64
SPIDR-213ENST00000521214 CDC42BPAQ5VT25 1732 aa11.02□□□□□ -0.65
SPIDR-213ENST00000521214 ADGRL1O94910 1474 aa11.02□□□□□ -0.65
SPIDR-213ENST00000521214 SHROOM2Q13796 1616 aa11.02□□□□□ -0.65
SPIDR-213ENST00000521214 TSPOAP1O95153 1857 aa11.02□□□□□ -0.65
SPIDR-213ENST00000521214 NEFLP07196 543 aa11.01□□□□□ -0.65
SPIDR-213ENST00000521214 HSPA5P11021 654 aaKnown RBP11.01□□□□□ -0.65
SPIDR-213ENST00000521214 PLCH2O75038 1416 aa11.01□□□□□ -0.65
SPIDR-213ENST00000521214 CCDC141Q6ZP82 1450 aa11□□□□□ -0.65
SPIDR-213ENST00000521214 SAFB2Q14151 953 aaKnown RBP eCLIP11□□□□□ -0.652e-6■■■■□ 22
SPIDR-213ENST00000521214 SAMD9LQ8IVG5 1584 aa11□□□□□ -0.65
SPIDR-213ENST00000521214 TCOF1Q13428 1488 aaKnown RBP11□□□□□ -0.65
SPIDR-213ENST00000521214 WASHC2CQ9Y4E1 1318 aa11□□□□□ -0.65
SPIDR-213ENST00000521214 RTN4Q9NQC3 1192 aaKnown RBP11□□□□□ -0.65
SPIDR-213ENST00000521214 KDM5BQ9UGL1 1544 aa11□□□□□ -0.65
SPIDR-213ENST00000521214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.99□□□□□ -0.65
SPIDR-213ENST00000521214 UBE2Q2Q8WVN8 375 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms