RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 CFDP1Q9UEE9 299 aaPredicted RBP27■■□□□ 1.91
TRAM1-203ENST00000520700 CDC42BPAQ5VT25 1732 aa26.99■■□□□ 1.91
TRAM1-203ENST00000520700 AKNAQ7Z591 1439 aa26.99■■□□□ 1.91
TRAM1-203ENST00000520700 CDC42BPBQ9Y5S2 1711 aa26.98■■□□□ 1.91
TRAM1-203ENST00000520700 ARHGAP5Q13017 1502 aa26.97■■□□□ 1.91
TRAM1-203ENST00000520700 MYOM3Q5VTT5 1437 aa26.97■■□□□ 1.91
TRAM1-203ENST00000520700 CFAP74Q9C0B2 1584 aa26.97■■□□□ 1.91
TRAM1-203ENST00000520700 MIA2Q96PC5 1412 aa26.96■■□□□ 1.91
TRAM1-203ENST00000520700 ITSN2Q9NZM3 1697 aa26.94■■□□□ 1.9
TRAM1-203ENST00000520700 KIAA1107Q9UPP5 1409 aa26.9■■□□□ 1.9
TRAM1-203ENST00000520700 PLEKHH2Q8IVE3 1493 aa26.89■■□□□ 1.9
TRAM1-203ENST00000520700 COL17A1Q9UMD9 1497 aaPredicted RBP26.89■■□□□ 1.9
TRAM1-203ENST00000520700 PPARGC1BQ86YN6 1023 aaKnown RBP26.89■■□□□ 1.9
TRAM1-203ENST00000520700 ADGRL1O94910 1474 aa26.87■■□□□ 1.89
TRAM1-203ENST00000520700 SCAPERQ9BY12 1400 aa26.87■■□□□ 1.89
TRAM1-203ENST00000520700 ZNF777Q9ULD5 760 aaPredicted RBP26.86■■□□□ 1.89
TRAM1-203ENST00000520700 DENND4BO75064 1496 aaPredicted RBP26.85■■□□□ 1.89
TRAM1-203ENST00000520700 SAMD9LQ8IVG5 1584 aa26.84■■□□□ 1.89
TRAM1-203ENST00000520700 FGD6Q6ZV73 1430 aa26.84■■□□□ 1.89
TRAM1-203ENST00000520700 ZNF644Q9H582 1327 aaPredicted RBP26.84■■□□□ 1.89
TRAM1-203ENST00000520700 ABCC1P33527 1531 aa26.83■■□□□ 1.89
TRAM1-203ENST00000520700 KDM6BO15054 1643 aa26.83■■□□□ 1.88
TRAM1-203ENST00000520700 RSPH4AQ5TD94 716 aa26.82■■□□□ 1.88
TRAM1-203ENST00000520700 ARHGEF12Q9NZN5 1544 aa26.8■■□□□ 1.88
TRAM1-203ENST00000520700 TCOF1Q13428 1488 aaKnown RBP26.8■■□□□ 1.88
TRAM1-203ENST00000520700 POGZQ7Z3K3 1410 aa26.79■■□□□ 1.88
TRAM1-203ENST00000520700 CAMSAP2Q08AD1 1489 aa26.79■■□□□ 1.88
TRAM1-203ENST00000520700 MBD5Q9P267 1494 aa26.79■■□□□ 1.88
TRAM1-203ENST00000520700 RAPGEF3O95398 923 aa26.78■■□□□ 1.88
TRAM1-203ENST00000520700 HNRNPMP52272 730 aaKnown RBP eCLIP26.77■■□□□ 1.88
TRAM1-203ENST00000520700 ZNF518AQ6AHZ1 1483 aa26.75■■□□□ 1.87
TRAM1-203ENST00000520700 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.75■■□□□ 1.871e-6■□□□□ 9.9
TRAM1-203ENST00000520700 TRAPPC8Q9Y2L5 1435 aa26.74■■□□□ 1.87
TRAM1-203ENST00000520700 AFAP1Q8N556 730 aa26.74■■□□□ 1.87
TRAM1-203ENST00000520700 PTPN23Q9H3S7 1636 aa26.74■■□□□ 1.87
TRAM1-203ENST00000520700 SYCP2Q9BX26 1530 aa26.74■■□□□ 1.87
TRAM1-203ENST00000520700 RICTORQ6R327 1708 aa26.72■■□□□ 1.87
TRAM1-203ENST00000520700 RRBP1Q9P2E9 1410 aaKnown RBP26.72■■□□□ 1.87
TRAM1-203ENST00000520700 FRMPD1Q5SYB0 1578 aa26.71■■□□□ 1.87
TRAM1-203ENST00000520700 ARHGEF5Q12774 1597 aa26.71■■□□□ 1.87
TRAM1-203ENST00000520700 MAGI2Q86UL8 1455 aa26.7■■□□□ 1.87
TRAM1-203ENST00000520700 KDM5CP41229 1560 aa26.7■■□□□ 1.86
TRAM1-203ENST00000520700 ZMYM4Q5VZL5 1548 aa26.7■■□□□ 1.86
TRAM1-203ENST00000520700 MLH3Q9UHC1 1453 aa26.68■■□□□ 1.86
TRAM1-203ENST00000520700 CCDC141Q6ZP82 1450 aa26.67■■□□□ 1.86
TRAM1-203ENST00000520700 RTEL1-TNFRSF6BF6WH68 1400 aa26.64■■□□□ 1.85
TRAM1-203ENST00000520700 TSPY4P0CV99 314 aa26.63■■□□□ 1.85
TRAM1-203ENST00000520700 TSPY10P0CW01 314 aa26.63■■□□□ 1.85
TRAM1-203ENST00000520700 FAM50AQ14320 339 aaKnown RBP26.63■■□□□ 1.85
TRAM1-203ENST00000520700 SPAG9O60271 1321 aaKnown RBP26.63■■□□□ 1.85
TRAM1-203ENST00000520700 ABCC5O15440 1437 aa26.62■■□□□ 1.85
TRAM1-203ENST00000520700 DAPK1P53355 1430 aa26.58■■□□□ 1.85
TRAM1-203ENST00000520700 DNMT1P26358 1616 aaKnown RBP26.57■■□□□ 1.84
TRAM1-203ENST00000520700 SHANK2Q9UPX8 1470 aa26.56■■□□□ 1.84
TRAM1-203ENST00000520700 HECW2Q9P2P5 1572 aa26.56■■□□□ 1.84
TRAM1-203ENST00000520700 MAST1Q9Y2H9 1570 aa26.56■■□□□ 1.84
TRAM1-203ENST00000520700 ZFYVE16Q7Z3T8 1539 aa26.55■■□□□ 1.84
TRAM1-203ENST00000520700 YEATS2Q9ULM3 1422 aa26.54■■□□□ 1.84
TRAM1-203ENST00000520700 INO80Q9ULG1 1556 aaPredicted RBP26.54■■□□□ 1.84
TRAM1-203ENST00000520700 ATP7AQ04656 1500 aa26.52■■□□□ 1.84
TRAM1-203ENST00000520700 C9orf84Q5VXU9 1444 aa26.52■■□□□ 1.84
TRAM1-203ENST00000520700 KIDINS220Q9ULH0 1771 aa26.52■■□□□ 1.84
TRAM1-203ENST00000520700 ATP10AO60312 1499 aa26.51■■□□□ 1.83
TRAM1-203ENST00000520700 ARHGEF40Q8TER5 1519 aa26.5■■□□□ 1.83
TRAM1-203ENST00000520700 MYT1LQ9UL68 1186 aa26.5■■□□□ 1.83
TRAM1-203ENST00000520700 PTPRKQ15262 1439 aa26.48■■□□□ 1.83
TRAM1-203ENST00000520700 CROCC2H7BZ55 1655 aa26.47■■□□□ 1.83
TRAM1-203ENST00000520700 DIP2CQ9Y2E4 1556 aa26.46■■□□□ 1.83
TRAM1-203ENST00000520700 ADGRL2O95490 1459 aa26.46■■□□□ 1.83
TRAM1-203ENST00000520700 REREQ9P2R6 1566 aa26.46■■□□□ 1.83
TRAM1-203ENST00000520700 ROCK1Q13464 1354 aa26.45■■□□□ 1.82
TRAM1-203ENST00000520700 NCOA1Q15788 1441 aa26.44■■□□□ 1.82
TRAM1-203ENST00000520700 ANKRD30AQ9BXX3 1397 aa26.44■■□□□ 1.82
TRAM1-203ENST00000520700 ABCA6Q8N139 1617 aa26.43■■□□□ 1.82
TRAM1-203ENST00000520700 PLXNC1O60486 1568 aa26.42■■□□□ 1.82
TRAM1-203ENST00000520700 DHX29Q7Z478 1369 aaKnown RBP26.42■■□□□ 1.82
TRAM1-203ENST00000520700 CHIC2Q9UKJ5 165 aa26.41■■□□□ 1.82
TRAM1-203ENST00000520700 A2MP01023 1474 aa26.4■■□□□ 1.82
TRAM1-203ENST00000520700 AGLP35573 1532 aa26.39■■□□□ 1.81
TRAM1-203ENST00000520700 ADGBQ8N7X0 1667 aa26.38■■□□□ 1.81
TRAM1-203ENST00000520700 ITGAEP38570 1179 aa26.37■■□□□ 1.81
TRAM1-203ENST00000520700 KIF15Q9NS87 1388 aa26.36■■□□□ 1.81
TRAM1-203ENST00000520700 RRP7BPQ9NSQ0 103 aa26.36■■□□□ 1.81
TRAM1-203ENST00000520700 DUOX2Q9NRD8 1548 aa26.34■■□□□ 1.81
TRAM1-203ENST00000520700 ERBINQ96RT1 1412 aa26.29■■□□□ 1.8
TRAM1-203ENST00000520700 ARID4BQ4LE39 1312 aaPredicted RBP26.28■■□□□ 1.8
TRAM1-203ENST00000520700 SIGLEC1Q9BZZ2 1709 aa26.26■■□□□ 1.79
TRAM1-203ENST00000520700 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
TRAM1-203ENST00000520700 BCORL1Q5H9F3 1711 aa26.25■■□□□ 1.79
TRAM1-203ENST00000520700 ANKRD50Q9ULJ7 1429 aa26.25■■□□□ 1.79
TRAM1-203ENST00000520700 TRIM26Q12899 539 aaPredicted RBP26.25■■□□□ 1.79
TRAM1-203ENST00000520700 HFM1A2PYH4 1435 aa26.24■■□□□ 1.79
TRAM1-203ENST00000520700 KIF3BO15066 747 aa26.24■■□□□ 1.79
TRAM1-203ENST00000520700 EIF2AK4Q9P2K8 1649 aaKnown RBP26.23■■□□□ 1.79
TRAM1-203ENST00000520700 NAIPQ13075 1403 aa26.22■■□□□ 1.79
TRAM1-203ENST00000520700 GGT6Q6P531 493 aa26.15■■□□□ 1.78
TRAM1-203ENST00000520700 RNF17Q9BXT8 1623 aaKnown RBP26.14■■□□□ 1.78
TRAM1-203ENST00000520700 MLECQ14165 292 aa26.14■■□□□ 1.78
TRAM1-203ENST00000520700 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.77
TRAM1-203ENST00000520700 ADAMTSL3P82987 1691 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms