RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 ZFYVE16Q7Z3T8 1539 aa26.08■■□□□ 1.77
IGHV3-42-201ENST00000520410 HECW2Q9P2P5 1572 aa26.07■■□□□ 1.76
IGHV3-42-201ENST00000520410 FYCO1Q9BQS8 1478 aa26.04■■□□□ 1.76
IGHV3-42-201ENST00000520410 POGZQ7Z3K3 1410 aa26.04■■□□□ 1.76
IGHV3-42-201ENST00000520410 ZMYM4Q5VZL5 1548 aa26.03■■□□□ 1.76
IGHV3-42-201ENST00000520410 BCORL1Q5H9F3 1711 aa26.02■■□□□ 1.76
IGHV3-42-201ENST00000520410 PLPPR3Q6T4P5 718 aa26.02■■□□□ 1.76
IGHV3-42-201ENST00000520410 YEATS2Q9ULM3 1422 aa26.02■■□□□ 1.76
IGHV3-42-201ENST00000520410 ADAMTSL3P82987 1691 aa26■■□□□ 1.75
IGHV3-42-201ENST00000520410 MADDQ8WXG6 1647 aa26■■□□□ 1.75
IGHV3-42-201ENST00000520410 PTPRMP28827 1452 aa25.99■■□□□ 1.75
IGHV3-42-201ENST00000520410 MLECQ14165 292 aa25.99■■□□□ 1.75
IGHV3-42-201ENST00000520410 MAGI2Q86UL8 1455 aa25.97■■□□□ 1.75
IGHV3-42-201ENST00000520410 RIMS1Q86UR5 1692 aaKnown RBP25.95■■□□□ 1.74
IGHV3-42-201ENST00000520410 ZNF518AQ6AHZ1 1483 aa25.93■■□□□ 1.74
IGHV3-42-201ENST00000520410 PREX2Q70Z35 1606 aa25.93■■□□□ 1.74
IGHV3-42-201ENST00000520410 ZNF777Q9ULD5 760 aaPredicted RBP25.92■■□□□ 1.74
IGHV3-42-201ENST00000520410 CDC42BPBQ9Y5S2 1711 aa25.91■■□□□ 1.74
IGHV3-42-201ENST00000520410 AFAP1Q8N556 730 aa25.9■■□□□ 1.74
IGHV3-42-201ENST00000520410 CEP162Q5TB80 1403 aa25.88■■□□□ 1.73
IGHV3-42-201ENST00000520410 C9orf84Q5VXU9 1444 aa25.88■■□□□ 1.73
IGHV3-42-201ENST00000520410 ATP10AO60312 1499 aa25.87■■□□□ 1.73
IGHV3-42-201ENST00000520410 SIGLEC1Q9BZZ2 1709 aa25.86■■□□□ 1.73
IGHV3-42-201ENST00000520410 MTUS2Q5JR59 1369 aa25.86■■□□□ 1.73
IGHV3-42-201ENST00000520410 ABCC1P33527 1531 aa25.84■■□□□ 1.73
IGHV3-42-201ENST00000520410 CDC42BPAQ5VT25 1732 aa25.84■■□□□ 1.73
IGHV3-42-201ENST00000520410 KDM5CP41229 1560 aa25.82■■□□□ 1.72
IGHV3-42-201ENST00000520410 ITSN2Q9NZM3 1697 aa25.82■■□□□ 1.72
IGHV3-42-201ENST00000520410 FER1L4A9Z1Z3 1794 aa25.82■■□□□ 1.72
IGHV3-42-201ENST00000520410 CCNB3Q8WWL7 1395 aa25.8■■□□□ 1.72
IGHV3-42-201ENST00000520410 TRAPPC8Q9Y2L5 1435 aa25.8■■□□□ 1.72
IGHV3-42-201ENST00000520410 ARHGEF12Q9NZN5 1544 aa25.77■■□□□ 1.72
IGHV3-42-201ENST00000520410 DIP2CQ9Y2E4 1556 aa25.77■■□□□ 1.72
IGHV3-42-201ENST00000520410 CFDP1Q9UEE9 299 aaPredicted RBP25.76■■□□□ 1.71
IGHV3-42-201ENST00000520410 ABCA6Q8N139 1617 aa25.75■■□□□ 1.71
IGHV3-42-201ENST00000520410 SYCP2Q9BX26 1530 aa25.75■■□□□ 1.71
IGHV3-42-201ENST00000520410 SAMD9LQ8IVG5 1584 aa25.74■■□□□ 1.71
IGHV3-42-201ENST00000520410 GPATCH8Q9UKJ3 1502 aaKnown RBP25.74■■□□□ 1.71
IGHV3-42-201ENST00000520410 LOC105371045A0A1W2PR82 267 aa25.74■■□□□ 1.71
IGHV3-42-201ENST00000520410 EHBP1L1Q8N3D4 1523 aa25.73■■□□□ 1.71
IGHV3-42-201ENST00000520410 MLH3Q9UHC1 1453 aa25.72■■□□□ 1.71
IGHV3-42-201ENST00000520410 HNRNPMP52272 730 aaKnown RBP eCLIP25.72■■□□□ 1.71
IGHV3-42-201ENST00000520410 ESF1Q9H501 851 aaKnown RBP25.72■■□□□ 1.71
IGHV3-42-201ENST00000520410 LMTK3Q96Q04 1460 aa25.69■■□□□ 1.7
IGHV3-42-201ENST00000520410 SPAG9O60271 1321 aaKnown RBP25.68■■□□□ 1.7
IGHV3-42-201ENST00000520410 PLEKHH2Q8IVE3 1493 aa25.66■■□□□ 1.7
IGHV3-42-201ENST00000520410 HSPA2P54652 639 aa25.66■■□□□ 1.7
IGHV3-42-201ENST00000520410 CEBPAP49715 358 aaPredicted RBP25.65■■□□□ 1.7
IGHV3-42-201ENST00000520410 TIAM1Q13009 1591 aa25.65■■□□□ 1.7
IGHV3-42-201ENST00000520410 KIDINS220Q9ULH0 1771 aa25.64■■□□□ 1.7
IGHV3-42-201ENST00000520410 REREQ9P2R6 1566 aa25.64■■□□□ 1.69
IGHV3-42-201ENST00000520410 ILDR1Q86SU0 546 aaPredicted RBP25.63■■□□□ 1.69
IGHV3-42-201ENST00000520410 ATP7AQ04656 1500 aa25.59■■□□□ 1.69
IGHV3-42-201ENST00000520410 SUPT6HQ7KZ85 1726 aaKnown RBP25.59■■□□□ 1.69
IGHV3-42-201ENST00000520410 VPS8Q8N3P4 1428 aa25.58■■□□□ 1.69
IGHV3-42-201ENST00000520410 KIAA1107Q9UPP5 1409 aa25.58■■□□□ 1.69
IGHV3-42-201ENST00000520410 ZNF644Q9H582 1327 aaPredicted RBP25.58■■□□□ 1.69
IGHV3-42-201ENST00000520410 AGLP35573 1532 aa25.58■■□□□ 1.68
IGHV3-42-201ENST00000520410 NCOA2Q15596 1464 aa25.56■■□□□ 1.68
IGHV3-42-201ENST00000520410 PREX1Q8TCU6 1659 aa25.54■■□□□ 1.68
IGHV3-42-201ENST00000520410 INO80Q9ULG1 1556 aaPredicted RBP25.53■■□□□ 1.68
IGHV3-42-201ENST00000520410 UHRF1BP1Q6BDS2 1440 aa25.51■■□□□ 1.67
IGHV3-42-201ENST00000520410 A2MP01023 1474 aa25.5■■□□□ 1.67
IGHV3-42-201ENST00000520410 C3P01024 1663 aa25.49■■□□□ 1.67
IGHV3-42-201ENST00000520410 CAMSAP2Q08AD1 1489 aa25.48■■□□□ 1.67
IGHV3-42-201ENST00000520410 CNTLNQ9NXG0 1405 aa25.47■■□□□ 1.67
IGHV3-42-201ENST00000520410 GGT6Q6P531 493 aa25.47■■□□□ 1.67
IGHV3-42-201ENST00000520410 LRRC9Q6ZRR7 1453 aa25.46■■□□□ 1.67
IGHV3-42-201ENST00000520410 APLP2Q06481 763 aa25.44■■□□□ 1.66
IGHV3-42-201ENST00000520410 ADGBQ8N7X0 1667 aa25.44■■□□□ 1.66
IGHV3-42-201ENST00000520410 CCDC141Q6ZP82 1450 aa25.43■■□□□ 1.66
IGHV3-42-201ENST00000520410 MBD5Q9P267 1494 aa25.43■■□□□ 1.66
IGHV3-42-201ENST00000520410 PLXNC1O60486 1568 aa25.41■■□□□ 1.66
IGHV3-42-201ENST00000520410 CLTCQ00610 1675 aaKnown RBP25.4■■□□□ 1.66
IGHV3-42-201ENST00000520410 KANK4Q5T7N3 995 aaPredicted RBP25.38■■□□□ 1.65
IGHV3-42-201ENST00000520410 RTEL1-TNFRSF6BF6WH68 1400 aa25.37■■□□□ 1.65
IGHV3-42-201ENST00000520410 MROH2AA6NES4 1674 aa25.36■■□□□ 1.65
IGHV3-42-201ENST00000520410 ZMYM3Q14202 1370 aa25.36■■□□□ 1.65
IGHV3-42-201ENST00000520410 TSPY4P0CV99 314 aa25.36■■□□□ 1.65
IGHV3-42-201ENST00000520410 TSPY10P0CW01 314 aa25.36■■□□□ 1.65
IGHV3-42-201ENST00000520410 RSPH4AQ5TD94 716 aa25.34■■□□□ 1.65
IGHV3-42-201ENST00000520410 FBXO41Q8TF61 875 aa25.33■■□□□ 1.65
IGHV3-42-201ENST00000520410 MAP3K1Q13233 1512 aa25.32■■□□□ 1.64
IGHV3-42-201ENST00000520410 KIF3BO15066 747 aa25.32■■□□□ 1.64
IGHV3-42-201ENST00000520410 DHX29Q7Z478 1369 aaKnown RBP25.31■■□□□ 1.64
IGHV3-42-201ENST00000520410 DMRT2Q9Y5R5 561 aa25.3■■□□□ 1.64
IGHV3-42-201ENST00000520410 ARHGEF5Q12774 1597 aa25.3■■□□□ 1.64
IGHV3-42-201ENST00000520410 SETD1BQ9UPS6 1966 aaKnown RBP25.29■■□□□ 1.64
IGHV3-42-201ENST00000520410 NPATQ14207 1427 aa25.29■■□□□ 1.64
IGHV3-42-201ENST00000520410 MYOM3Q5VTT5 1437 aa25.29■■□□□ 1.64
IGHV3-42-201ENST00000520410 STRCQ7RTU9 1775 aa25.24■■□□□ 1.63
IGHV3-42-201ENST00000520410 PPP6R1Q9UPN7 881 aa25.23■■□□□ 1.63
IGHV3-42-201ENST00000520410 MYO3AQ8NEV4 1616 aa25.23■■□□□ 1.63
IGHV3-42-201ENST00000520410 MIA2Q96PC5 1412 aa25.22■■□□□ 1.63
IGHV3-42-201ENST00000520410 CERKQ8TCT0 537 aa25.22■■□□□ 1.63
IGHV3-42-201ENST00000520410 WASHC2CQ9Y4E1 1318 aa25.21■■□□□ 1.63
IGHV3-42-201ENST00000520410 CAMSAP1Q5T5Y3 1602 aa25.21■■□□□ 1.63
IGHV3-42-201ENST00000520410 PTPRKQ15262 1439 aa25.2■■□□□ 1.63
IGHV3-42-201ENST00000520410 KDM5DQ9BY66 1539 aa25.2■■□□□ 1.62
IGHV3-42-201ENST00000520410 NCOA1Q15788 1441 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms