RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 ADGRL1O94910 1474 aa17.74■□□□□ 0.43
PABPC1-214ENST00000520142 KDM4FA0A1W2PPD8 638 aa17.73■□□□□ 0.43
PABPC1-214ENST00000520142 SCAPERQ9BY12 1400 aa17.72■□□□□ 0.43
PABPC1-214ENST00000520142 ZMYM4Q5VZL5 1548 aa17.72■□□□□ 0.43
PABPC1-214ENST00000520142 CDC42BPAQ5VT25 1732 aa17.72■□□□□ 0.43
PABPC1-214ENST00000520142 ARHGAP5Q13017 1502 aa17.72■□□□□ 0.43
PABPC1-214ENST00000520142 GPATCH8Q9UKJ3 1502 aaKnown RBP17.72■□□□□ 0.43
PABPC1-214ENST00000520142 TIAM1Q13009 1591 aa17.71■□□□□ 0.43
PABPC1-214ENST00000520142 MTUS2Q5JR59 1369 aa17.71■□□□□ 0.43
PABPC1-214ENST00000520142 EHBP1L1Q8N3D4 1523 aa17.71■□□□□ 0.43
PABPC1-214ENST00000520142 POGZQ7Z3K3 1410 aa17.71■□□□□ 0.43
PABPC1-214ENST00000520142 MAP3K1Q13233 1512 aa17.7■□□□□ 0.42
PABPC1-214ENST00000520142 ARHGEF12Q9NZN5 1544 aa17.67■□□□□ 0.42
PABPC1-214ENST00000520142 MAGI2Q86UL8 1455 aa17.67■□□□□ 0.42
PABPC1-214ENST00000520142 ABCC1P33527 1531 aa17.66■□□□□ 0.42
PABPC1-214ENST00000520142 KDM5CP41229 1560 aa17.66■□□□□ 0.42
PABPC1-214ENST00000520142 ARHGEF40Q8TER5 1519 aa17.65■□□□□ 0.42
PABPC1-214ENST00000520142 LRRC9Q6ZRR7 1453 aa17.64■□□□□ 0.41
PABPC1-214ENST00000520142 YEATS2Q9ULM3 1422 aa17.64■□□□□ 0.41
PABPC1-214ENST00000520142 ZNF518AQ6AHZ1 1483 aa17.63■□□□□ 0.41
PABPC1-214ENST00000520142 SAMD9LQ8IVG5 1584 aa17.63■□□□□ 0.41
PABPC1-214ENST00000520142 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
PABPC1-214ENST00000520142 NCOA2Q15596 1464 aa17.63■□□□□ 0.41
PABPC1-214ENST00000520142 AFAP1Q8N556 730 aa17.62■□□□□ 0.41
PABPC1-214ENST00000520142 TRAPPC8Q9Y2L5 1435 aa17.62■□□□□ 0.41
PABPC1-214ENST00000520142 ZFYVE16Q7Z3T8 1539 aa17.62■□□□□ 0.41
PABPC1-214ENST00000520142 ITSN2Q9NZM3 1697 aa17.61■□□□□ 0.41
PABPC1-214ENST00000520142 KANK4Q5T7N3 995 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-214ENST00000520142 KIAA1107Q9UPP5 1409 aa17.6■□□□□ 0.41
PABPC1-214ENST00000520142 SUPT6HQ7KZ85 1726 aaKnown RBP17.6■□□□□ 0.41
PABPC1-214ENST00000520142 MLH3Q9UHC1 1453 aa17.59■□□□□ 0.41
PABPC1-214ENST00000520142 CFDP1Q9UEE9 299 aaPredicted RBP17.59■□□□□ 0.41
PABPC1-214ENST00000520142 SIGLEC1Q9BZZ2 1709 aa17.58■□□□□ 0.4
PABPC1-214ENST00000520142 PLEKHH2Q8IVE3 1493 aa17.56■□□□□ 0.4
PABPC1-214ENST00000520142 SYCP2Q9BX26 1530 aa17.56■□□□□ 0.4
PABPC1-214ENST00000520142 HECW2Q9P2P5 1572 aa17.55■□□□□ 0.4
PABPC1-214ENST00000520142 ATP10AO60312 1499 aa17.55■□□□□ 0.4
PABPC1-214ENST00000520142 MBD5Q9P267 1494 aa17.55■□□□□ 0.4
PABPC1-214ENST00000520142 ADAMTSL3P82987 1691 aa17.55■□□□□ 0.4
PABPC1-214ENST00000520142 ZNF644Q9H582 1327 aaPredicted RBP17.54■□□□□ 0.4
PABPC1-214ENST00000520142 ZNF777Q9ULD5 760 aaPredicted RBP17.54■□□□□ 0.4
PABPC1-214ENST00000520142 HNRNPMP52272 730 aaKnown RBP eCLIP17.53■□□□□ 0.4
PABPC1-214ENST00000520142 DIP2CQ9Y2E4 1556 aa17.53■□□□□ 0.4
PABPC1-214ENST00000520142 BCORL1Q5H9F3 1711 aa17.52■□□□□ 0.4
PABPC1-214ENST00000520142 KIDINS220Q9ULH0 1771 aa17.52■□□□□ 0.4
PABPC1-214ENST00000520142 REREQ9P2R6 1566 aa17.52■□□□□ 0.39
PABPC1-214ENST00000520142 ABCA6Q8N139 1617 aa17.51■□□□□ 0.39
PABPC1-214ENST00000520142 C9orf84Q5VXU9 1444 aa17.51■□□□□ 0.39
PABPC1-214ENST00000520142 CAMSAP2Q08AD1 1489 aa17.48■□□□□ 0.39
PABPC1-214ENST00000520142 INO80Q9ULG1 1556 aaPredicted RBP17.48■□□□□ 0.39
PABPC1-214ENST00000520142 MYOM3Q5VTT5 1437 aa17.47■□□□□ 0.39
PABPC1-214ENST00000520142 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
PABPC1-214ENST00000520142 AGLP35573 1532 aa17.46■□□□□ 0.39
PABPC1-214ENST00000520142 SPAG9O60271 1321 aaKnown RBP17.46■□□□□ 0.38
PABPC1-214ENST00000520142 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.38
PABPC1-214ENST00000520142 APLP2Q06481 763 aa17.45■□□□□ 0.38
PABPC1-214ENST00000520142 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
PABPC1-214ENST00000520142 ATP7AQ04656 1500 aa17.45■□□□□ 0.38
PABPC1-214ENST00000520142 ARHGEF5Q12774 1597 aa17.44■□□□□ 0.38
PABPC1-214ENST00000520142 PTPRMP28827 1452 aa17.44■□□□□ 0.38
PABPC1-214ENST00000520142 RSPH4AQ5TD94 716 aa17.43■□□□□ 0.38
PABPC1-214ENST00000520142 RTEL1-TNFRSF6BF6WH68 1400 aa17.43■□□□□ 0.38
PABPC1-214ENST00000520142 CCDC141Q6ZP82 1450 aa17.42■□□□□ 0.38
PABPC1-214ENST00000520142 PLXNC1O60486 1568 aa17.4■□□□□ 0.38
PABPC1-214ENST00000520142 MYT1LQ9UL68 1186 aa17.39■□□□□ 0.37
PABPC1-214ENST00000520142 A2MP01023 1474 aa17.37■□□□□ 0.37
PABPC1-214ENST00000520142 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
PABPC1-214ENST00000520142 RIMS1Q86UR5 1692 aaKnown RBP17.36■□□□□ 0.37
PABPC1-214ENST00000520142 MLECQ14165 292 aa17.36■□□□□ 0.37
PABPC1-214ENST00000520142 FGD6Q6ZV73 1430 aa17.36■□□□□ 0.37
PABPC1-214ENST00000520142 MAST1Q9Y2H9 1570 aa17.35■□□□□ 0.37
PABPC1-214ENST00000520142 ADGBQ8N7X0 1667 aa17.35■□□□□ 0.37
PABPC1-214ENST00000520142 FER1L4A9Z1Z3 1794 aa17.34■□□□□ 0.37
PABPC1-214ENST00000520142 PTPN23Q9H3S7 1636 aa17.34■□□□□ 0.37
PABPC1-214ENST00000520142 DHX29Q7Z478 1369 aaKnown RBP17.32■□□□□ 0.36
PABPC1-214ENST00000520142 ABCC5O15440 1437 aa17.3■□□□□ 0.36
PABPC1-214ENST00000520142 TSPY4P0CV99 314 aa17.3■□□□□ 0.36
PABPC1-214ENST00000520142 TSPY10P0CW01 314 aa17.3■□□□□ 0.36
PABPC1-214ENST00000520142 SHANK2Q9UPX8 1470 aa17.28■□□□□ 0.36
PABPC1-214ENST00000520142 DNMT1P26358 1616 aaKnown RBP17.28■□□□□ 0.36
PABPC1-214ENST00000520142 CROCC2H7BZ55 1655 aa17.26■□□□□ 0.35
PABPC1-214ENST00000520142 DAPK1P53355 1430 aa17.26■□□□□ 0.35
PABPC1-214ENST00000520142 CNTLNQ9NXG0 1405 aa17.25■□□□□ 0.35
PABPC1-214ENST00000520142 PPP6R1Q9UPN7 881 aa17.24■□□□□ 0.35
PABPC1-214ENST00000520142 CEBPAP49715 358 aaPredicted RBP17.23■□□□□ 0.35
PABPC1-214ENST00000520142 LMTK3Q96Q04 1460 aa17.23■□□□□ 0.35
PABPC1-214ENST00000520142 MROH2AA6NES4 1674 aa17.23■□□□□ 0.35
PABPC1-214ENST00000520142 C3P01024 1663 aa17.23■□□□□ 0.35
PABPC1-214ENST00000520142 KIF3BO15066 747 aa17.2■□□□□ 0.34
PABPC1-214ENST00000520142 GGT6Q6P531 493 aa17.2■□□□□ 0.34
PABPC1-214ENST00000520142 ZMYM3Q14202 1370 aa17.19■□□□□ 0.34
PABPC1-214ENST00000520142 EIF2AK4Q9P2K8 1649 aaKnown RBP17.19■□□□□ 0.34
PABPC1-214ENST00000520142 DUOX2Q9NRD8 1548 aa17.19■□□□□ 0.34
PABPC1-214ENST00000520142 FAM135AQ9P2D6 1515 aa17.19■□□□□ 0.34
PABPC1-214ENST00000520142 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
PABPC1-214ENST00000520142 RNF17Q9BXT8 1623 aaKnown RBP17.18■□□□□ 0.34
PABPC1-214ENST00000520142 CLTCQ00610 1675 aaKnown RBP17.18■□□□□ 0.34
PABPC1-214ENST00000520142 PPARGC1BQ86YN6 1023 aaKnown RBP17.18■□□□□ 0.34
PABPC1-214ENST00000520142 FBXO41Q8TF61 875 aa17.18■□□□□ 0.34
PABPC1-214ENST00000520142 NCOA1Q15788 1441 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms