RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 RICTORQ6R327 1708 aa29.05■■■□□ 2.24
SREK1-207ENST00000520058 TIAM1Q13009 1591 aa29.05■■■□□ 2.24
SREK1-207ENST00000520058 RAPGEF3O95398 923 aa29.03■■■□□ 2.24
SREK1-207ENST00000520058 APLP2Q06481 763 aa29.03■■■□□ 2.24
SREK1-207ENST00000520058 SUPT6HQ7KZ85 1726 aaKnown RBP29■■■□□ 2.23
SREK1-207ENST00000520058 SCAPERQ9BY12 1400 aa28.99■■■□□ 2.23
SREK1-207ENST00000520058 CCNB3Q8WWL7 1395 aa28.99■■■□□ 2.23
SREK1-207ENST00000520058 ITSN2Q9NZM3 1697 aa28.99■■■□□ 2.23
SREK1-207ENST00000520058 MAP3K1Q13233 1512 aa28.98■■■□□ 2.23
SREK1-207ENST00000520058 FRMPD1Q5SYB0 1578 aa28.97■■■□□ 2.23
SREK1-207ENST00000520058 AEBP2Q6ZN18 517 aaPredicted RBP28.97■■■□□ 2.23
SREK1-207ENST00000520058 GPATCH8Q9UKJ3 1502 aaKnown RBP28.93■■■□□ 2.22
SREK1-207ENST00000520058 ZMYM4Q5VZL5 1548 aa28.92■■■□□ 2.22
SREK1-207ENST00000520058 POGZQ7Z3K3 1410 aa28.92■■■□□ 2.22
SREK1-207ENST00000520058 CFDP1Q9UEE9 299 aaPredicted RBP28.91■■■□□ 2.22
SREK1-207ENST00000520058 ZNF518AQ6AHZ1 1483 aa28.9■■■□□ 2.22
SREK1-207ENST00000520058 MAGI2Q86UL8 1455 aa28.9■■■□□ 2.22
SREK1-207ENST00000520058 ZNF777Q9ULD5 760 aaPredicted RBP28.89■■■□□ 2.22
SREK1-207ENST00000520058 LRRC9Q6ZRR7 1453 aa28.89■■■□□ 2.22
SREK1-207ENST00000520058 ABCC1P33527 1531 aa28.87■■■□□ 2.21
SREK1-207ENST00000520058 PLEKHH2Q8IVE3 1493 aa28.86■■■□□ 2.21
SREK1-207ENST00000520058 ZFYVE16Q7Z3T8 1539 aa28.85■■■□□ 2.21
SREK1-207ENST00000520058 ARHGEF40Q8TER5 1519 aa28.85■■■□□ 2.21
SREK1-207ENST00000520058 NCOA2Q15596 1464 aa28.85■■■□□ 2.21
SREK1-207ENST00000520058 MYT1LQ9UL68 1186 aa28.84■■■□□ 2.21
SREK1-207ENST00000520058 SAMD9LQ8IVG5 1584 aa28.83■■■□□ 2.21
SREK1-207ENST00000520058 KDM5CP41229 1560 aa28.8■■■□□ 2.2
SREK1-207ENST00000520058 HECW2Q9P2P5 1572 aa28.79■■■□□ 2.2
SREK1-207ENST00000520058 AFAP1Q8N556 730 aa28.78■■■□□ 2.2
SREK1-207ENST00000520058 ARID4BQ4LE39 1312 aaPredicted RBP28.77■■■□□ 2.2
SREK1-207ENST00000520058 KIAA1107Q9UPP5 1409 aa28.77■■■□□ 2.2
SREK1-207ENST00000520058 SYCP2Q9BX26 1530 aa28.76■■■□□ 2.19
SREK1-207ENST00000520058 KDM4FA0A1W2PPD8 638 aa28.76■■■□□ 2.19
SREK1-207ENST00000520058 KANK4Q5T7N3 995 aaPredicted RBP28.75■■■□□ 2.19
SREK1-207ENST00000520058 ARHGEF12Q9NZN5 1544 aa28.73■■■□□ 2.19
SREK1-207ENST00000520058 YEATS2Q9ULM3 1422 aa28.72■■■□□ 2.19
SREK1-207ENST00000520058 TRAPPC8Q9Y2L5 1435 aa28.72■■■□□ 2.19
SREK1-207ENST00000520058 MLH3Q9UHC1 1453 aa28.72■■■□□ 2.19
SREK1-207ENST00000520058 ATP10AO60312 1499 aa28.71■■■□□ 2.19
SREK1-207ENST00000520058 HNRNPMP52272 730 aaKnown RBP eCLIP28.7■■■□□ 2.183e-7■■■■□ 25
SREK1-207ENST00000520058 BCORL1Q5H9F3 1711 aa28.68■■■□□ 2.18
SREK1-207ENST00000520058 C9orf84Q5VXU9 1444 aa28.68■■■□□ 2.18
SREK1-207ENST00000520058 RSPH4AQ5TD94 716 aa28.65■■■□□ 2.18
SREK1-207ENST00000520058 SPAG9O60271 1321 aaKnown RBP28.65■■■□□ 2.18
SREK1-207ENST00000520058 KIDINS220Q9ULH0 1771 aa28.65■■■□□ 2.18
SREK1-207ENST00000520058 CAMSAP2Q08AD1 1489 aa28.64■■■□□ 2.17
SREK1-207ENST00000520058 MYOM3Q5VTT5 1437 aa28.63■■■□□ 2.17
SREK1-207ENST00000520058 DIP2CQ9Y2E4 1556 aa28.62■■■□□ 2.17
SREK1-207ENST00000520058 MIA2Q96PC5 1412 aa28.62■■■□□ 2.17
SREK1-207ENST00000520058 ZNF644Q9H582 1327 aaPredicted RBP28.62■■■□□ 2.17
SREK1-207ENST00000520058 ABCA6Q8N139 1617 aa28.61■■■□□ 2.17
SREK1-207ENST00000520058 ADAMTSL3P82987 1691 aa28.61■■■□□ 2.17
SREK1-207ENST00000520058 REREQ9P2R6 1566 aa28.6■■■□□ 2.17
SREK1-207ENST00000520058 ATP7AQ04656 1500 aa28.59■■■□□ 2.17
SREK1-207ENST00000520058 INO80Q9ULG1 1556 aaPredicted RBP28.57■■■□□ 2.16
SREK1-207ENST00000520058 CCDC141Q6ZP82 1450 aa28.56■■■□□ 2.16
SREK1-207ENST00000520058 MBD5Q9P267 1494 aa28.56■■■□□ 2.16
SREK1-207ENST00000520058 SIGLEC1Q9BZZ2 1709 aa28.55■■■□□ 2.16
SREK1-207ENST00000520058 ARHGEF5Q12774 1597 aa28.55■■■□□ 2.16
SREK1-207ENST00000520058 ADGBQ8N7X0 1667 aa28.54■■■□□ 2.16
SREK1-207ENST00000520058 MADDQ8WXG6 1647 aa28.53■■■□□ 2.16
SREK1-207ENST00000520058 FER1L4A9Z1Z3 1794 aa28.52■■■□□ 2.16
SREK1-207ENST00000520058 TSPY4P0CV99 314 aa28.52■■■□□ 2.16
SREK1-207ENST00000520058 TSPY10P0CW01 314 aa28.52■■■□□ 2.16
SREK1-207ENST00000520058 MLECQ14165 292 aa28.51■■■□□ 2.15
SREK1-207ENST00000520058 RTEL1-TNFRSF6BF6WH68 1400 aa28.51■■■□□ 2.15
SREK1-207ENST00000520058 PTPN23Q9H3S7 1636 aa28.5■■■□□ 2.15
SREK1-207ENST00000520058 RIMS1Q86UR5 1692 aaKnown RBP28.49■■■□□ 2.15
SREK1-207ENST00000520058 AGLP35573 1532 aa28.48■■■□□ 2.15
SREK1-207ENST00000520058 FGD6Q6ZV73 1430 aa28.44■■■□□ 2.14
SREK1-207ENST00000520058 ESF1Q9H501 851 aaKnown RBP28.44■■■□□ 2.14
SREK1-207ENST00000520058 PTPRMP28827 1452 aa28.44■■■□□ 2.14
SREK1-207ENST00000520058 A2MP01023 1474 aa28.43■■■□□ 2.14
SREK1-207ENST00000520058 MAST1Q9Y2H9 1570 aa28.39■■■□□ 2.14
SREK1-207ENST00000520058 CROCC2H7BZ55 1655 aa28.38■■■□□ 2.13
SREK1-207ENST00000520058 PLXNC1O60486 1568 aa28.37■■■□□ 2.13
SREK1-207ENST00000520058 TCOF1Q13428 1488 aaKnown RBP28.37■■■□□ 2.13
SREK1-207ENST00000520058 DNMT1P26358 1616 aaKnown RBP28.34■■■□□ 2.13
SREK1-207ENST00000520058 DHX29Q7Z478 1369 aaKnown RBP28.33■■■□□ 2.13
SREK1-207ENST00000520058 SHANK2Q9UPX8 1470 aa28.31■■■□□ 2.12
SREK1-207ENST00000520058 FAM50AQ14320 339 aaKnown RBP28.3■■■□□ 2.12
SREK1-207ENST00000520058 CNTLNQ9NXG0 1405 aa28.29■■■□□ 2.12
SREK1-207ENST00000520058 DAPK1P53355 1430 aa28.28■■■□□ 2.12
SREK1-207ENST00000520058 PLPPR3Q6T4P5 718 aa28.28■■■□□ 2.12
SREK1-207ENST00000520058 PPP6R1Q9UPN7 881 aa28.27■■■□□ 2.12
SREK1-207ENST00000520058 GGT6Q6P531 493 aa28.26■■■□□ 2.11
SREK1-207ENST00000520058 ABCC5O15440 1437 aa28.26■■■□□ 2.11
SREK1-207ENST00000520058 SETD1BQ9UPS6 1966 aaKnown RBP28.25■■■□□ 2.11
SREK1-207ENST00000520058 PPARGC1BQ86YN6 1023 aaKnown RBP28.25■■■□□ 2.11
SREK1-207ENST00000520058 MROH2AA6NES4 1674 aa28.25■■■□□ 2.11
SREK1-207ENST00000520058 KIF3BO15066 747 aa28.23■■■□□ 2.11
SREK1-207ENST00000520058 C3P01024 1663 aa28.22■■■□□ 2.11
SREK1-207ENST00000520058 CLTCQ00610 1675 aaKnown RBP28.22■■■□□ 2.11
SREK1-207ENST00000520058 EIF2AK4Q9P2K8 1649 aaKnown RBP28.21■■■□□ 2.11
SREK1-207ENST00000520058 DUOX2Q9NRD8 1548 aa28.21■■■□□ 2.11
SREK1-207ENST00000520058 ANKRD30AQ9BXX3 1397 aa28.2■■■□□ 2.1
SREK1-207ENST00000520058 FAM135AQ9P2D6 1515 aa28.17■■■□□ 2.1
SREK1-207ENST00000520058 KIF15Q9NS87 1388 aa28.16■■■□□ 2.1
SREK1-207ENST00000520058 PREX1Q8TCU6 1659 aa28.15■■■□□ 2.1
SREK1-207ENST00000520058 CHIC2Q9UKJ5 165 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms