RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 DOK7Q18PE1 504 aa8.64□□□□□ -1.03
SDC2-204ENST00000519914 SPNS2Q8IVW8 549 aa8.64□□□□□ -1.03
SDC2-204ENST00000519914 STK25O00506 426 aa8.63□□□□□ -1.03
SDC2-204ENST00000519914 TAOK2Q9UL54 1235 aa8.63□□□□□ -1.03
SDC2-204ENST00000519914 NLRP6P59044 892 aa8.62□□□□□ -1.03
SDC2-204ENST00000519914 ABCC9O60706 1549 aa8.62□□□□□ -1.03
SDC2-204ENST00000519914 SUPT5HO00267 1087 aaKnown RBP8.61□□□□□ -1.03
SDC2-204ENST00000519914 MMRN1Q13201 1228 aa8.61□□□□□ -1.03
SDC2-204ENST00000519914 ERBB3P21860 1342 aa8.61□□□□□ -1.03
SDC2-204ENST00000519914 RGL2O15211 777 aa8.6□□□□□ -1.03
SDC2-204ENST00000519914 HOXB1P14653 301 aaPredicted RBP8.6□□□□□ -1.03
SDC2-204ENST00000519914 PKD2Q13563 968 aa8.59□□□□□ -1.03
SDC2-204ENST00000519914 NACADO15069 1562 aa8.59□□□□□ -1.03
SDC2-204ENST00000519914 RIMBP2O15034 1052 aa8.58□□□□□ -1.04
SDC2-204ENST00000519914 FBXO22Q8NEZ5 403 aa8.58□□□□□ -1.04
SDC2-204ENST00000519914 MFRPQ9BY79 579 aa8.58□□□□□ -1.04
SDC2-204ENST00000519914 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
SDC2-204ENST00000519914 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
SDC2-204ENST00000519914 DCAF8L2P0C7V8 631 aa8.54□□□□□ -1.04
SDC2-204ENST00000519914 VARS2Q5ST30 1063 aaKnown RBP8.54□□□□□ -1.04
SDC2-204ENST00000519914 ARSIQ5FYB1 569 aa8.53□□□□□ -1.04
SDC2-204ENST00000519914 GPR153Q6NV75 609 aa8.52□□□□□ -1.05
SDC2-204ENST00000519914 KHSRPQ92945 711 aaKnown RBP eCLIP8.52□□□□□ -1.05
SDC2-204ENST00000519914 SCRIBQ14160 1630 aa8.5□□□□□ -1.05
SDC2-204ENST00000519914 ZSWIM6Q9HCJ5 1215 aa8.5□□□□□ -1.05
SDC2-204ENST00000519914 C2orf72A6NCS6 295 aa8.49□□□□□ -1.05
SDC2-204ENST00000519914 PPP1R37O75864 691 aa8.47□□□□□ -1.05
SDC2-204ENST00000519914 RSF1Q96T23 1441 aaPredicted RBP8.46□□□□□ -1.05
SDC2-204ENST00000519914 ZNF687Q8N1G0 1237 aa8.44□□□□□ -1.06
SDC2-204ENST00000519914 TMC2Q8TDI7 906 aa8.44□□□□□ -1.06
SDC2-204ENST00000519914 KIF3CO14782 793 aa8.43□□□□□ -1.06
SDC2-204ENST00000519914 RB1CC1Q8TDY2 1594 aa8.42□□□□□ -1.06
SDC2-204ENST00000519914 ZNF316A6NFI3 1004 aaPredicted RBP8.42□□□□□ -1.06
SDC2-204ENST00000519914 NUDT7P0C024 238 aa8.42□□□□□ -1.06
SDC2-204ENST00000519914 ANKRD13DQ6ZTN6 518 aa8.41□□□□□ -1.06
SDC2-204ENST00000519914 CHGAP10645 457 aaKnown RBP8.39□□□□□ -1.07
SDC2-204ENST00000519914 PCDHGA4Q9Y5G9 962 aa8.38□□□□□ -1.07
SDC2-204ENST00000519914 RNF166Q96A37 237 aaPredicted RBP8.37□□□□□ -1.07
SDC2-204ENST00000519914 HS6ST3Q8IZP7 471 aa8.36□□□□□ -1.07
SDC2-204ENST00000519914 MYT1LQ9UL68 1186 aa8.36□□□□□ -1.07
SDC2-204ENST00000519914 LHX6Q9UPM6 363 aa8.36□□□□□ -1.07
SDC2-204ENST00000519914 AXIN2Q9Y2T1 843 aa8.34□□□□□ -1.07
SDC2-204ENST00000519914 SLC34A2O95436 690 aa8.32□□□□□ -1.08
SDC2-204ENST00000519914 MROH2BQ7Z745 1585 aa8.32□□□□□ -1.08
SDC2-204ENST00000519914 PLPP6Q8IY26 295 aa8.31□□□□□ -1.08
SDC2-204ENST00000519914 BAZ1AQ9NRL2 1556 aaPredicted RBP8.31□□□□□ -1.08
SDC2-204ENST00000519914 CECR2Q9BXF3 1484 aa8.31□□□□□ -1.08
SDC2-204ENST00000519914 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.08
SDC2-204ENST00000519914 UNC13AQ9UPW8 1703 aa8.3□□□□□ -1.08
SDC2-204ENST00000519914 NKX1-1Q15270 411 aaPredicted RBP8.29□□□□□ -1.08
SDC2-204ENST00000519914 POTEEQ6S8J3 1075 aa8.29□□□□□ -1.08
SDC2-204ENST00000519914 DSG2Q14126 1118 aa8.29□□□□□ -1.08
SDC2-204ENST00000519914 GPHNQ9NQX3 736 aaPredicted RBP8.29□□□□□ -1.08
SDC2-204ENST00000519914 FOXK1P85037 733 aa8.28□□□□□ -1.08
SDC2-204ENST00000519914 EIF4G1Q04637 1599 aaKnown RBP8.27□□□□□ -1.09
SDC2-204ENST00000519914 WIZO95785 1651 aa8.26□□□□□ -1.09
SDC2-204ENST00000519914 PTCD2Q8WV60 388 aaKnown RBP8.26□□□□□ -1.09
SDC2-204ENST00000519914 PBX2P40425 430 aa8.25□□□□□ -1.09
SDC2-204ENST00000519914 PTGER2P43116 358 aa8.25□□□□□ -1.09
SDC2-204ENST00000519914 SMARCA4P51532 1647 aa8.24□□□□□ -1.09
SDC2-204ENST00000519914 UPF1Q92900 1129 aaKnown RBP eCLIP8.24□□□□□ -1.09
SDC2-204ENST00000519914 TOP2AP11388 1531 aaKnown RBP8.23□□□□□ -1.09
SDC2-204ENST00000519914 TBC1D12O60347 775 aa8.23□□□□□ -1.09
SDC2-204ENST00000519914 KDM4FA0A1W2PPD8 638 aa8.22□□□□□ -1.09
SDC2-204ENST00000519914 ARHGAP33O14559 1287 aa8.22□□□□□ -1.09
SDC2-204ENST00000519914 PSEN2P49810 448 aa8.22□□□□□ -1.09
SDC2-204ENST00000519914 PSDA5PKW4 1024 aaPredicted RBP8.21□□□□□ -1.1
SDC2-204ENST00000519914 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
SDC2-204ENST00000519914 ADGRD1Q6QNK2 874 aa8.19□□□□□ -1.1
SDC2-204ENST00000519914 DNAJC5Q9H3Z4 198 aa8.19□□□□□ -1.1
SDC2-204ENST00000519914 RYDENQ9NUL5 291 aaKnown RBP8.19□□□□□ -1.1
SDC2-204ENST00000519914 PEG3Q9GZU2 1588 aa8.19□□□□□ -1.1
SDC2-204ENST00000519914 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
SDC2-204ENST00000519914 BICRAQ9NZM4 1560 aa8.18□□□□□ -1.1
SDC2-204ENST00000519914 PPP1R15BQ5SWA1 713 aa8.17□□□□□ -1.1
SDC2-204ENST00000519914 CRISPLD2Q9H0B8 497 aa8.16□□□□□ -1.1
SDC2-204ENST00000519914 GTPBP6O43824 516 aaPredicted RBP8.15□□□□□ -1.1
SDC2-204ENST00000519914 HRCP23327 699 aa8.15□□□□□ -1.1
SDC2-204ENST00000519914 PDE4AP27815 886 aa8.15□□□□□ -1.1
SDC2-204ENST00000519914 OXER1Q8TDS5 423 aa8.15□□□□□ -1.1
SDC2-204ENST00000519914 KCNK17Q96T54 332 aa8.15□□□□□ -1.1
SDC2-204ENST00000519914 NCKAP5LQ9HCH0 1330 aa8.15□□□□□ -1.11
SDC2-204ENST00000519914 SMARCA2P51531 1590 aa8.15□□□□□ -1.11
SDC2-204ENST00000519914 ZNF454Q8N9F8 522 aa8.14□□□□□ -1.11
SDC2-204ENST00000519914 STAC3Q96MF2 364 aa8.14□□□□□ -1.11
SDC2-204ENST00000519914 LARP6Q9BRS8 491 aaKnown RBP8.14□□□□□ -1.11
SDC2-204ENST00000519914 LOC105371045A0A1W2PR82 267 aa8.12□□□□□ -1.11
SDC2-204ENST00000519914 KCNH8Q96L42 1107 aa8.12□□□□□ -1.11
SDC2-204ENST00000519914 MYT1Q01538 1121 aa8.11□□□□□ -1.11
SDC2-204ENST00000519914 KCTD12Q96CX2 325 aaKnown RBP8.11□□□□□ -1.11
SDC2-204ENST00000519914 TK2O00142 265 aa8.1□□□□□ -1.11
SDC2-204ENST00000519914 HRO43593 1189 aa8.1□□□□□ -1.11
SDC2-204ENST00000519914 HCSTQ9UBK5 93 aa8.1□□□□□ -1.11
SDC2-204ENST00000519914 CCDC88BA6NC98 1476 aa8.1□□□□□ -1.11
SDC2-204ENST00000519914 DDX27Q96GQ7 796 aaKnown RBP8.09□□□□□ -1.11
SDC2-204ENST00000519914 EVI5O60447 810 aa8.08□□□□□ -1.12
SDC2-204ENST00000519914 PLA2G2EQ9NZK7 142 aa8.08□□□□□ -1.12
SDC2-204ENST00000519914 MAP3K9P80192 1104 aa8.07□□□□□ -1.12
SDC2-204ENST00000519914 VPS9D1Q9Y2B5 631 aa8.06□□□□□ -1.12
SDC2-204ENST00000519914 FOSBP53539 338 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms