RNA–Protein interactions for RNA: ENST00000519860.3

ERGIC1-206, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 3 BASIC

Gene ERGIC1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-206ENST00000519860 CCDC18Q5T9S5 1454 aa36.99■■■■□ 3.51
ERGIC1-206ENST00000519860 POGZQ7Z3K3 1410 aa36.98■■■■□ 3.51
ERGIC1-206ENST00000519860 YEATS2Q9ULM3 1422 aa36.98■■■■□ 3.51
ERGIC1-206ENST00000519860 BCORL1Q5H9F3 1711 aa36.97■■■■□ 3.51
ERGIC1-206ENST00000519860 ZFYVE16Q7Z3T8 1539 aa36.97■■■■□ 3.51
ERGIC1-206ENST00000519860 ARHGAP5Q13017 1502 aa36.95■■■■□ 3.51
ERGIC1-206ENST00000519860 FYCO1Q9BQS8 1478 aa36.94■■■■□ 3.5
ERGIC1-206ENST00000519860 PTPRMP28827 1452 aa36.93■■■■□ 3.5
ERGIC1-206ENST00000519860 MADDQ8WXG6 1647 aa36.9■■■■□ 3.5
ERGIC1-206ENST00000519860 MAGI2Q86UL8 1455 aa36.89■■■■□ 3.5
ERGIC1-206ENST00000519860 SIGLEC1Q9BZZ2 1709 aa36.86■■■■□ 3.49
ERGIC1-206ENST00000519860 CDC42BPBQ9Y5S2 1711 aa36.83■■■■□ 3.49
ERGIC1-206ENST00000519860 PREX2Q70Z35 1606 aa36.8■■■■□ 3.48
ERGIC1-206ENST00000519860 ZNF518AQ6AHZ1 1483 aa36.8■■■■□ 3.48
ERGIC1-206ENST00000519860 AFAP1Q8N556 730 aa36.79■■■■□ 3.48
ERGIC1-206ENST00000519860 RIMS1Q86UR5 1692 aaKnown RBP36.78■■■■□ 3.48
ERGIC1-206ENST00000519860 MLECQ14165 292 aa36.77■■■■□ 3.48
ERGIC1-206ENST00000519860 ATP10AO60312 1499 aa36.74■■■■□ 3.47
ERGIC1-206ENST00000519860 MYT1LQ9UL68 1186 aa36.73■■■■□ 3.47
ERGIC1-206ENST00000519860 KDM5CP41229 1560 aa36.72■■■■□ 3.47
ERGIC1-206ENST00000519860 PLPPR3Q6T4P5 718 aa36.71■■■■□ 3.47
ERGIC1-206ENST00000519860 CDC42BPAQ5VT25 1732 aa36.71■■■■□ 3.47
ERGIC1-206ENST00000519860 CEP162Q5TB80 1403 aa36.7■■■■□ 3.47
ERGIC1-206ENST00000519860 C9orf84Q5VXU9 1444 aa36.7■■■■□ 3.47
ERGIC1-206ENST00000519860 ABCC1P33527 1531 aa36.69■■■■□ 3.46
ERGIC1-206ENST00000519860 ARHGEF12Q9NZN5 1544 aa36.68■■■■□ 3.46
ERGIC1-206ENST00000519860 TRAPPC8Q9Y2L5 1435 aa36.67■■■■□ 3.46
ERGIC1-206ENST00000519860 ZNF777Q9ULD5 760 aaPredicted RBP36.64■■■■□ 3.46
ERGIC1-206ENST00000519860 ITSN2Q9NZM3 1697 aa36.62■■■■□ 3.45
ERGIC1-206ENST00000519860 MTUS2Q5JR59 1369 aa36.61■■■■□ 3.45
ERGIC1-206ENST00000519860 GPATCH8Q9UKJ3 1502 aaKnown RBP36.6■■■■□ 3.45
ERGIC1-206ENST00000519860 DIP2CQ9Y2E4 1556 aa36.6■■■■□ 3.45
ERGIC1-206ENST00000519860 FER1L4A9Z1Z3 1794 aa36.6■■■■□ 3.45
ERGIC1-206ENST00000519860 MLH3Q9UHC1 1453 aa36.57■■■■□ 3.45
ERGIC1-206ENST00000519860 ABCA6Q8N139 1617 aa36.56■■■■□ 3.44
ERGIC1-206ENST00000519860 SAMD9LQ8IVG5 1584 aa36.56■■■■□ 3.44
ERGIC1-206ENST00000519860 LMTK3Q96Q04 1460 aa36.55■■■■□ 3.44
ERGIC1-206ENST00000519860 CCNB3Q8WWL7 1395 aa36.53■■■■□ 3.44
ERGIC1-206ENST00000519860 LOC105371045A0A1W2PR82 267 aa36.53■■■■□ 3.44
ERGIC1-206ENST00000519860 SYCP2Q9BX26 1530 aa36.52■■■■□ 3.44
ERGIC1-206ENST00000519860 CFDP1Q9UEE9 299 aaPredicted RBP36.5■■■■□ 3.43
ERGIC1-206ENST00000519860 HNRNPMP52272 730 aaKnown RBP eCLIP36.48■■■■□ 3.43
ERGIC1-206ENST00000519860 KIDINS220Q9ULH0 1771 aa36.46■■■■□ 3.43
ERGIC1-206ENST00000519860 REREQ9P2R6 1566 aa36.46■■■■□ 3.43
ERGIC1-206ENST00000519860 EHBP1L1Q8N3D4 1523 aa36.45■■■■□ 3.43
ERGIC1-206ENST00000519860 ILDR1Q86SU0 546 aaPredicted RBP36.43■■■■□ 3.42
ERGIC1-206ENST00000519860 CEBPAP49715 358 aaPredicted RBP36.42■■■■□ 3.42
ERGIC1-206ENST00000519860 HSPA2P54652 639 aa36.42■■■■□ 3.42
ERGIC1-206ENST00000519860 TIAM1Q13009 1591 aa36.4■■■■□ 3.42
ERGIC1-206ENST00000519860 SPAG9O60271 1321 aaKnown RBP36.39■■■■□ 3.42
ERGIC1-206ENST00000519860 PLEKHH2Q8IVE3 1493 aa36.37■■■■□ 3.41
ERGIC1-206ENST00000519860 KIAA1107Q9UPP5 1409 aa36.37■■■■□ 3.41
ERGIC1-206ENST00000519860 AGLP35573 1532 aa36.36■■■■□ 3.41
ERGIC1-206ENST00000519860 ZNF644Q9H582 1327 aaPredicted RBP36.35■■■■□ 3.41
ERGIC1-206ENST00000519860 ATP7AQ04656 1500 aa36.31■■■■□ 3.4
ERGIC1-206ENST00000519860 ESF1Q9H501 851 aaKnown RBP36.28■■■■□ 3.4
ERGIC1-206ENST00000519860 VPS8Q8N3P4 1428 aa36.27■■■■□ 3.4
ERGIC1-206ENST00000519860 INO80Q9ULG1 1556 aaPredicted RBP36.27■■■■□ 3.4
ERGIC1-206ENST00000519860 NCOA2Q15596 1464 aa36.24■■■■□ 3.39
ERGIC1-206ENST00000519860 PREX1Q8TCU6 1659 aa36.23■■■■□ 3.39
ERGIC1-206ENST00000519860 SUPT6HQ7KZ85 1726 aaKnown RBP36.23■■■■□ 3.39
ERGIC1-206ENST00000519860 C3P01024 1663 aa36.2■■■■□ 3.39
ERGIC1-206ENST00000519860 MBD5Q9P267 1494 aa36.2■■■■□ 3.39
ERGIC1-206ENST00000519860 A2MP01023 1474 aa36.18■■■■□ 3.38
ERGIC1-206ENST00000519860 PLXNC1O60486 1568 aa36.15■■■■□ 3.38
ERGIC1-206ENST00000519860 UHRF1BP1Q6BDS2 1440 aa36.14■■■■□ 3.38
ERGIC1-206ENST00000519860 CNTLNQ9NXG0 1405 aa36.13■■■■□ 3.37
ERGIC1-206ENST00000519860 CAMSAP2Q08AD1 1489 aa36.12■■■■□ 3.37
ERGIC1-206ENST00000519860 LRRC9Q6ZRR7 1453 aa36.12■■■■□ 3.37
ERGIC1-206ENST00000519860 ADGBQ8N7X0 1667 aa36.07■■■■□ 3.37
ERGIC1-206ENST00000519860 KANK4Q5T7N3 995 aaPredicted RBP36.07■■■■□ 3.36
ERGIC1-206ENST00000519860 GGT6Q6P531 493 aa36.07■■■■□ 3.36
ERGIC1-206ENST00000519860 SETD1BQ9UPS6 1966 aaKnown RBP36.06■■■■□ 3.36
ERGIC1-206ENST00000519860 CCDC141Q6ZP82 1450 aa36.05■■■■□ 3.36
ERGIC1-206ENST00000519860 RTEL1-TNFRSF6BF6WH68 1400 aa36.05■■■■□ 3.36
ERGIC1-206ENST00000519860 MROH2AA6NES4 1674 aa36.02■■■■□ 3.36
ERGIC1-206ENST00000519860 ZMYM3Q14202 1370 aa36.02■■■■□ 3.36
ERGIC1-206ENST00000519860 CLTCQ00610 1675 aaKnown RBP36.01■■■■□ 3.36
ERGIC1-206ENST00000519860 MAP3K1Q13233 1512 aa35.98■■■■□ 3.35
ERGIC1-206ENST00000519860 FBXO41Q8TF61 875 aa35.98■■■■□ 3.35
ERGIC1-206ENST00000519860 DHX29Q7Z478 1369 aaKnown RBP35.95■■■■□ 3.35
ERGIC1-206ENST00000519860 RSPH4AQ5TD94 716 aa35.95■■■■□ 3.35
ERGIC1-206ENST00000519860 STRCQ7RTU9 1775 aa35.94■■■■□ 3.34
ERGIC1-206ENST00000519860 NPATQ14207 1427 aa35.92■■■■□ 3.34
ERGIC1-206ENST00000519860 ARHGEF5Q12774 1597 aa35.92■■■■□ 3.34
ERGIC1-206ENST00000519860 KIF3BO15066 747 aa35.89■■■■□ 3.34
ERGIC1-206ENST00000519860 TSPY4P0CV99 314 aa35.88■■■■□ 3.33
ERGIC1-206ENST00000519860 TSPY10P0CW01 314 aa35.88■■■■□ 3.33
ERGIC1-206ENST00000519860 MYOM3Q5VTT5 1437 aa35.87■■■■□ 3.33
ERGIC1-206ENST00000519860 PPP6R1Q9UPN7 881 aa35.86■■■■□ 3.33
ERGIC1-206ENST00000519860 APLP2Q06481 763 aa35.85■■■■□ 3.33
ERGIC1-206ENST00000519860 DMRT2Q9Y5R5 561 aa35.85■■■■□ 3.33
ERGIC1-206ENST00000519860 PTPRKQ15262 1439 aa35.84■■■■□ 3.33
ERGIC1-206ENST00000519860 MIA2Q96PC5 1412 aa35.81■■■■□ 3.32
ERGIC1-206ENST00000519860 CERKQ8TCT0 537 aa35.8■■■■□ 3.32
ERGIC1-206ENST00000519860 MYO3AQ8NEV4 1616 aa35.78■■■■□ 3.32
ERGIC1-206ENST00000519860 NCOA1Q15788 1441 aa35.77■■■■□ 3.32
ERGIC1-206ENST00000519860 CAMSAP1Q5T5Y3 1602 aa35.76■■■■□ 3.32
ERGIC1-206ENST00000519860 MAST1Q9Y2H9 1570 aa35.74■■■■□ 3.31
ERGIC1-206ENST00000519860 PTPRTO14522 1441 aa35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms