RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 NLRP6P59044 892 aa13.23□□□□□ -0.29
PCM1-213ENST00000519802 FBXO22Q8NEZ5 403 aa13.22□□□□□ -0.29
PCM1-213ENST00000519802 ERBB3P21860 1342 aa13.21□□□□□ -0.29
PCM1-213ENST00000519802 STK24Q9Y6E0 443 aa13.21□□□□□ -0.29
PCM1-213ENST00000519802 ZSWIM6Q9HCJ5 1215 aa13.2□□□□□ -0.3
PCM1-213ENST00000519802 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
PCM1-213ENST00000519802 MFRPQ9BY79 579 aa13.17□□□□□ -0.3
PCM1-213ENST00000519802 STK25O00506 426 aa13.16□□□□□ -0.3
PCM1-213ENST00000519802 VARS2Q5ST30 1063 aaKnown RBP13.15□□□□□ -0.3
PCM1-213ENST00000519802 GPR153Q6NV75 609 aa13.15□□□□□ -0.3
PCM1-213ENST00000519802 PKD2Q13563 968 aa13.13□□□□□ -0.31
PCM1-213ENST00000519802 RGL2O15211 777 aa13.1□□□□□ -0.31
PCM1-213ENST00000519802 ARSIQ5FYB1 569 aa13.07□□□□□ -0.32
PCM1-213ENST00000519802 KIF3CO14782 793 aa13.05□□□□□ -0.32
PCM1-213ENST00000519802 ZNF687Q8N1G0 1237 aa13.05□□□□□ -0.32
PCM1-213ENST00000519802 C2orf72A6NCS6 295 aa13.02□□□□□ -0.33
PCM1-213ENST00000519802 KHSRPQ92945 711 aaKnown RBP eCLIP13.01□□□□□ -0.33
PCM1-213ENST00000519802 ZNF316A6NFI3 1004 aaPredicted RBP12.97□□□□□ -0.33
PCM1-213ENST00000519802 RNF166Q96A37 237 aaPredicted RBP12.94□□□□□ -0.34
PCM1-213ENST00000519802 PPP1R37O75864 691 aa12.93□□□□□ -0.34
PCM1-213ENST00000519802 TMC2Q8TDI7 906 aa12.92□□□□□ -0.34
PCM1-213ENST00000519802 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
PCM1-213ENST00000519802 SLC34A2O95436 690 aa12.91□□□□□ -0.34
PCM1-213ENST00000519802 NUDT7P0C024 238 aa12.9□□□□□ -0.34
PCM1-213ENST00000519802 PCDHGA4Q9Y5G9 962 aa12.89□□□□□ -0.35
PCM1-213ENST00000519802 PTGER2P43116 358 aa12.86□□□□□ -0.35
PCM1-213ENST00000519802 ANKRD13DQ6ZTN6 518 aa12.86□□□□□ -0.35
PCM1-213ENST00000519802 LHX6Q9UPM6 363 aa12.85□□□□□ -0.35
PCM1-213ENST00000519802 LSM11P83369 360 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCM1-213ENST00000519802 HS6ST3Q8IZP7 471 aa12.84□□□□□ -0.35
PCM1-213ENST00000519802 PBX2P40425 430 aa12.81□□□□□ -0.36
PCM1-213ENST00000519802 POTEEQ6S8J3 1075 aa12.78□□□□□ -0.36
PCM1-213ENST00000519802 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
PCM1-213ENST00000519802 KDM4FA0A1W2PPD8 638 aa12.75□□□□□ -0.37
PCM1-213ENST00000519802 FOXK1P85037 733 aa12.75□□□□□ -0.37
PCM1-213ENST00000519802 PTCD2Q8WV60 388 aaKnown RBP12.75□□□□□ -0.37
PCM1-213ENST00000519802 GPHNQ9NQX3 736 aaPredicted RBP12.74□□□□□ -0.37
PCM1-213ENST00000519802 CHGAP10645 457 aaKnown RBP12.73□□□□□ -0.37
PCM1-213ENST00000519802 PLPP6Q8IY26 295 aa12.72□□□□□ -0.37
PCM1-213ENST00000519802 PSDA5PKW4 1024 aaPredicted RBP12.71□□□□□ -0.37
PCM1-213ENST00000519802 DSG2Q14126 1118 aa12.69□□□□□ -0.38
PCM1-213ENST00000519802 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
PCM1-213ENST00000519802 DNAJC5Q9H3Z4 198 aa12.68□□□□□ -0.38
PCM1-213ENST00000519802 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
PCM1-213ENST00000519802 ADGRD1Q6QNK2 874 aa12.63□□□□□ -0.39
PCM1-213ENST00000519802 TBC1D12O60347 775 aa12.62□□□□□ -0.39
PCM1-213ENST00000519802 RYDENQ9NUL5 291 aaKnown RBP12.6□□□□□ -0.39
PCM1-213ENST00000519802 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
PCM1-213ENST00000519802 TK2O00142 265 aa12.58□□□□□ -0.4
PCM1-213ENST00000519802 PSEN2P49810 448 aa12.58□□□□□ -0.4
PCM1-213ENST00000519802 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
PCM1-213ENST00000519802 OXER1Q8TDS5 423 aa12.57□□□□□ -0.4
PCM1-213ENST00000519802 CRISPLD2Q9H0B8 497 aa12.57□□□□□ -0.4
PCM1-213ENST00000519802 HRO43593 1189 aa12.54□□□□□ -0.4
PCM1-213ENST00000519802 HCSTQ9UBK5 93 aa12.54□□□□□ -0.4
PCM1-213ENST00000519802 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
PCM1-213ENST00000519802 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
PCM1-213ENST00000519802 NCKAP5LQ9HCH0 1330 aa12.5□□□□□ -0.41
PCM1-213ENST00000519802 KCNK17Q96T54 332 aa12.49□□□□□ -0.41
PCM1-213ENST00000519802 PDE4AP27815 886 aa12.47□□□□□ -0.41
PCM1-213ENST00000519802 GTPBP6O43824 516 aaPredicted RBP12.46□□□□□ -0.41
PCM1-213ENST00000519802 KCNH8Q96L42 1107 aa12.46□□□□□ -0.41
PCM1-213ENST00000519802 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.41
PCM1-213ENST00000519802 ZNF454Q8N9F8 522 aa12.45□□□□□ -0.42
PCM1-213ENST00000519802 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
PCM1-213ENST00000519802 FOSBP53539 338 aa12.42□□□□□ -0.42
PCM1-213ENST00000519802 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
PCM1-213ENST00000519802 VPS9D1Q9Y2B5 631 aa12.42□□□□□ -0.42
PCM1-213ENST00000519802 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
PCM1-213ENST00000519802 KCTD12Q96CX2 325 aaKnown RBP12.41□□□□□ -0.42
PCM1-213ENST00000519802 STAC3Q96MF2 364 aa12.41□□□□□ -0.42
PCM1-213ENST00000519802 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.42
PCM1-213ENST00000519802 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
PCM1-213ENST00000519802 SLC4A5Q9BY07 1137 aa12.38□□□□□ -0.43
PCM1-213ENST00000519802 EVI5O60447 810 aa12.37□□□□□ -0.43
PCM1-213ENST00000519802 DDX27Q96GQ7 796 aaKnown RBP12.37□□□□□ -0.43
PCM1-213ENST00000519802 MFSD10Q14728 455 aa12.36□□□□□ -0.43
PCM1-213ENST00000519802 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
PCM1-213ENST00000519802 PTPREP23469 700 aa12.35□□□□□ -0.43
PCM1-213ENST00000519802 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
PCM1-213ENST00000519802 BHMG1C9JSJ3 638 aaPredicted RBP12.31□□□□□ -0.44
PCM1-213ENST00000519802 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
PCM1-213ENST00000519802 ZDHHC16Q969W1 377 aa12.31□□□□□ -0.44
PCM1-213ENST00000519802 ADAM33Q9BZ11 813 aa12.31□□□□□ -0.44
PCM1-213ENST00000519802 MAP3K9P80192 1104 aa12.3□□□□□ -0.44
PCM1-213ENST00000519802 EMILIN3Q9NT22 766 aa12.3□□□□□ -0.44
PCM1-213ENST00000519802 PTPN5P54829 565 aa12.27□□□□□ -0.45
PCM1-213ENST00000519802 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
PCM1-213ENST00000519802 THSD4Q6ZMP0 1018 aa12.24□□□□□ -0.45
PCM1-213ENST00000519802 MRPL50Q8N5N7 158 aaKnown RBP12.24□□□□□ -0.45
PCM1-213ENST00000519802 PCDHGA10Q9Y5H3 936 aa12.23□□□□□ -0.45
PCM1-213ENST00000519802 GOLGA8CPA6NN73 597 aa12.21□□□□□ -0.45
PCM1-213ENST00000519802 WNT2BQ93097 391 aa12.21□□□□□ -0.45
PCM1-213ENST00000519802 PPP1R3GB7ZBB8 358 aa12.2□□□□□ -0.46
PCM1-213ENST00000519802 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
PCM1-213ENST00000519802 PHF14O94880 888 aa12.16□□□□□ -0.46
PCM1-213ENST00000519802 COL9A1P20849 921 aa12.16□□□□□ -0.46
PCM1-213ENST00000519802 CAMK2BQ13554 666 aa12.16□□□□□ -0.46
PCM1-213ENST00000519802 IFFO2Q5TF58 517 aa12.16□□□□□ -0.46
PCM1-213ENST00000519802 TYW1BQ6NUM6 668 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms