RNA–Protein interactions for RNA: ENST00000519554.5

PCMTD1-202, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 3

Gene PCMTD1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-202ENST00000519554 HOXB1P14653 301 aaPredicted RBP16.2■□□□□ 0.18
PCMTD1-202ENST00000519554 POTEBQ6S5H4 581 aa16.2■□□□□ 0.18
PCMTD1-202ENST00000519554 PPP1R37O75864 691 aa16.19■□□□□ 0.18
PCMTD1-202ENST00000519554 FAM205CA6NFA0 338 aa16.18■□□□□ 0.18
PCMTD1-202ENST00000519554 CHGAP10645 457 aaKnown RBP16.18■□□□□ 0.18
PCMTD1-202ENST00000519554 HS3ST6Q96QI5 342 aa16.18■□□□□ 0.18
PCMTD1-202ENST00000519554 KIF3CO14782 793 aa16.15■□□□□ 0.18
PCMTD1-202ENST00000519554 RIMBP2O15034 1052 aa16.14■□□□□ 0.17
PCMTD1-202ENST00000519554 C2orf72A6NCS6 295 aa16.11■□□□□ 0.17
PCMTD1-202ENST00000519554 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
PCMTD1-202ENST00000519554 DNAJC5Q9H3Z4 198 aa16.09■□□□□ 0.17
PCMTD1-202ENST00000519554 NKX1-1Q15270 411 aaPredicted RBP16.08■□□□□ 0.16
PCMTD1-202ENST00000519554 GPR153Q6NV75 609 aa16.08■□□□□ 0.16
PCMTD1-202ENST00000519554 KRTAP3-3Q9BYR6 98 aa16.04■□□□□ 0.16
PCMTD1-202ENST00000519554 KRTAP3-2Q9BYR7 98 aa16.04■□□□□ 0.16
PCMTD1-202ENST00000519554 ERBB3P21860 1342 aa16.03■□□□□ 0.16
PCMTD1-202ENST00000519554 TMC2Q8TDI7 906 aa16.01■□□□□ 0.15
PCMTD1-202ENST00000519554 ARSIQ5FYB1 569 aa16■□□□□ 0.15
PCMTD1-202ENST00000519554 VARS2Q5ST30 1063 aaKnown RBP15.98■□□□□ 0.15
PCMTD1-202ENST00000519554 SPNS2Q8IVW8 549 aa15.98■□□□□ 0.15
PCMTD1-202ENST00000519554 KHSRPQ92945 711 aaKnown RBP eCLIP15.98■□□□□ 0.159e-7■■■□□ 17.6
PCMTD1-202ENST00000519554 SLC34A2O95436 690 aa15.9■□□□□ 0.14
PCMTD1-202ENST00000519554 MMRN1Q13201 1228 aa15.89■□□□□ 0.13
PCMTD1-202ENST00000519554 RYDENQ9NUL5 291 aaKnown RBP15.88■□□□□ 0.13
PCMTD1-202ENST00000519554 DCAF8L2P0C7V8 631 aa15.87■□□□□ 0.13
PCMTD1-202ENST00000519554 PCDHGA4Q9Y5G9 962 aa15.87■□□□□ 0.13
PCMTD1-202ENST00000519554 GPHNQ9NQX3 736 aaPredicted RBP15.86■□□□□ 0.13
PCMTD1-202ENST00000519554 ZNF316A6NFI3 1004 aaPredicted RBP15.85■□□□□ 0.13
PCMTD1-202ENST00000519554 NUDT7P0C024 238 aa15.85■□□□□ 0.13
PCMTD1-202ENST00000519554 FOXK1P85037 733 aa15.85■□□□□ 0.13
PCMTD1-202ENST00000519554 ZNF687Q8N1G0 1237 aa15.85■□□□□ 0.13
PCMTD1-202ENST00000519554 GTPBP6O43824 516 aaPredicted RBP15.82■□□□□ 0.12
PCMTD1-202ENST00000519554 DSG2Q14126 1118 aa15.81■□□□□ 0.12
PCMTD1-202ENST00000519554 PLPP6Q8IY26 295 aa15.81■□□□□ 0.12
PCMTD1-202ENST00000519554 PTCD2Q8WV60 388 aaKnown RBP15.76■□□□□ 0.11
PCMTD1-202ENST00000519554 LHX6Q9UPM6 363 aa15.76■□□□□ 0.11
PCMTD1-202ENST00000519554 CRISPLD2Q9H0B8 497 aa15.75■□□□□ 0.11
PCMTD1-202ENST00000519554 KDM4FA0A1W2PPD8 638 aa15.72■□□□□ 0.11
PCMTD1-202ENST00000519554 NCKAP5LQ9HCH0 1330 aa15.7■□□□□ 0.1
PCMTD1-202ENST00000519554 PPP1R15BQ5SWA1 713 aa15.65■□□□□ 0.1
PCMTD1-202ENST00000519554 POTEEQ6S8J3 1075 aa15.65■□□□□ 0.1
PCMTD1-202ENST00000519554 PDE4AP27815 886 aa15.62■□□□□ 0.09
PCMTD1-202ENST00000519554 OXER1Q8TDS5 423 aa15.61■□□□□ 0.09
PCMTD1-202ENST00000519554 LSM11P83369 360 aaKnown RBP eCLIP15.6■□□□□ 0.09
PCMTD1-202ENST00000519554 AMER1Q5JTC6 1135 aaPredicted RBP15.6■□□□□ 0.09
PCMTD1-202ENST00000519554 TBC1D12O60347 775 aa15.59■□□□□ 0.09
PCMTD1-202ENST00000519554 PBX2P40425 430 aa15.59■□□□□ 0.09
PCMTD1-202ENST00000519554 UPF1Q92900 1129 aaKnown RBP eCLIP15.59■□□□□ 0.09
PCMTD1-202ENST00000519554 ANKRD13DQ6ZTN6 518 aa15.58■□□□□ 0.08
PCMTD1-202ENST00000519554 AXIN2Q9Y2T1 843 aa15.58■□□□□ 0.08
PCMTD1-202ENST00000519554 PSDA5PKW4 1024 aaPredicted RBP15.57■□□□□ 0.08
PCMTD1-202ENST00000519554 RTN4Q9NQC3 1192 aaKnown RBP15.57■□□□□ 0.08
PCMTD1-202ENST00000519554 CADPS2Q86UW7 1296 aa15.56■□□□□ 0.08
PCMTD1-202ENST00000519554 LARP6Q9BRS8 491 aaKnown RBP15.56■□□□□ 0.08
PCMTD1-202ENST00000519554 MFSD10Q14728 455 aa15.54■□□□□ 0.08
PCMTD1-202ENST00000519554 RNF166Q96A37 237 aaPredicted RBP15.53■□□□□ 0.08
PCMTD1-202ENST00000519554 DDX27Q96GQ7 796 aaKnown RBP15.53■□□□□ 0.08
PCMTD1-202ENST00000519554 MYT1LQ9UL68 1186 aa15.53■□□□□ 0.08
PCMTD1-202ENST00000519554 BBXQ8WY36 941 aaPredicted RBP15.52■□□□□ 0.08
PCMTD1-202ENST00000519554 PTGER2P43116 358 aa15.49■□□□□ 0.07
PCMTD1-202ENST00000519554 ARHGAP33O14559 1287 aa15.48■□□□□ 0.07
PCMTD1-202ENST00000519554 PPP4R3BQ5MIZ7 849 aa15.48■□□□□ 0.07
PCMTD1-202ENST00000519554 PSEN2P49810 448 aa15.43■□□□□ 0.06
PCMTD1-202ENST00000519554 EMILIN3Q9NT22 766 aa15.42■□□□□ 0.06
PCMTD1-202ENST00000519554 DMRTA1Q5VZB9 504 aa15.41■□□□□ 0.06
PCMTD1-202ENST00000519554 ADGRD1Q6QNK2 874 aa15.4■□□□□ 0.06
PCMTD1-202ENST00000519554 EVI5O60447 810 aa15.39■□□□□ 0.05
PCMTD1-202ENST00000519554 ZNF454Q8N9F8 522 aa15.39■□□□□ 0.05
PCMTD1-202ENST00000519554 ANO8Q9HCE9 1232 aaPredicted RBP15.38■□□□□ 0.05
PCMTD1-202ENST00000519554 FOSBP53539 338 aa15.37■□□□□ 0.05
PCMTD1-202ENST00000519554 KCNK17Q96T54 332 aa15.35■□□□□ 0.05
PCMTD1-202ENST00000519554 MAP3K9P80192 1104 aa15.34■□□□□ 0.05
PCMTD1-202ENST00000519554 TK2O00142 265 aa15.33■□□□□ 0.04
PCMTD1-202ENST00000519554 SPRYD3Q8NCJ5 442 aa15.33■□□□□ 0.04
PCMTD1-202ENST00000519554 JPH4Q96JJ6 628 aa15.32■□□□□ 0.04
PCMTD1-202ENST00000519554 BCL2L12Q9HB09 334 aa15.32■□□□□ 0.04
PCMTD1-202ENST00000519554 HRO43593 1189 aa15.31■□□□□ 0.04
PCMTD1-202ENST00000519554 CAMK2BQ13554 666 aa15.31■□□□□ 0.04
PCMTD1-202ENST00000519554 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.31■□□□□ 0.04
PCMTD1-202ENST00000519554 KCNH8Q96L42 1107 aa15.27■□□□□ 0.04
PCMTD1-202ENST00000519554 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
PCMTD1-202ENST00000519554 ZDHHC16Q969W1 377 aa15.24■□□□□ 0.03
PCMTD1-202ENST00000519554 ADAM33Q9BZ11 813 aa15.24■□□□□ 0.03
PCMTD1-202ENST00000519554 PTPREP23469 700 aa15.22■□□□□ 0.03
PCMTD1-202ENST00000519554 CFAP44Q96MT7 982 aa15.22■□□□□ 0.03
PCMTD1-202ENST00000519554 VPS9D1Q9Y2B5 631 aa15.22■□□□□ 0.03
PCMTD1-202ENST00000519554 DPYSL4O14531 572 aa15.21■□□□□ 0.03
PCMTD1-202ENST00000519554 PCDHGA10Q9Y5H3 936 aa15.21■□□□□ 0.03
PCMTD1-202ENST00000519554 SLC4A5Q9BY07 1137 aa15.18■□□□□ 0.02
PCMTD1-202ENST00000519554 ZBED2Q9BTP6 218 aa15.16■□□□□ 0.02
PCMTD1-202ENST00000519554 PHF14O94880 888 aa15.14■□□□□ 0.01
PCMTD1-202ENST00000519554 TYW1BQ6NUM6 668 aa15.12■□□□□ 0.01
PCMTD1-202ENST00000519554 BHMG1C9JSJ3 638 aaPredicted RBP15.1■□□□□ 0.01
PCMTD1-202ENST00000519554 FBXW7Q969H0 707 aa15.1■□□□□ 0.01
PCMTD1-202ENST00000519554 KCTD12Q96CX2 325 aaKnown RBP15.1■□□□□ 0.01
PCMTD1-202ENST00000519554 STAC3Q96MF2 364 aa15.1■□□□□ 0.01
PCMTD1-202ENST00000519554 HCSTQ9UBK5 93 aa15.1■□□□□ 0.01
PCMTD1-202ENST00000519554 PPP1R3GB7ZBB8 358 aa15.09■□□□□ 0.01
PCMTD1-202ENST00000519554 COL9A1P20849 921 aa15.07■□□□□ 0
PCMTD1-202ENST00000519554 PDIA6Q15084 440 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms