RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 UACAQ9BZF9 1416 aa15.48■□□□□ 0.07
SPIDR-211ENST00000519401 SAMD9Q5K651 1589 aa15.48■□□□□ 0.07
SPIDR-211ENST00000519401 RANGAP1P46060 587 aaPredicted RBP15.48■□□□□ 0.07
SPIDR-211ENST00000519401 P3H3Q8IVL6 736 aa15.48■□□□□ 0.07
SPIDR-211ENST00000519401 FAM43AQ8N2R8 423 aa15.48■□□□□ 0.07
SPIDR-211ENST00000519401 UHRF1BP1LA0JNW5 1464 aa15.47■□□□□ 0.07
SPIDR-211ENST00000519401 PPM1GO15355 546 aaPredicted RBP15.47■□□□□ 0.07
SPIDR-211ENST00000519401 ABCC2Q92887 1545 aa15.46■□□□□ 0.07
SPIDR-211ENST00000519401 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
SPIDR-211ENST00000519401 PLB1Q6P1J6 1458 aa15.45■□□□□ 0.06
SPIDR-211ENST00000519401 DDX10Q13206 875 aaKnown RBP15.44■□□□□ 0.06
SPIDR-211ENST00000519401 MAPKBP1O60336 1514 aa15.43■□□□□ 0.06
SPIDR-211ENST00000519401 ABCA8O94911 1581 aa15.42■□□□□ 0.06
SPIDR-211ENST00000519401 NEFMP07197 916 aa15.41■□□□□ 0.06
SPIDR-211ENST00000519401 FHOD3Q2V2M9 1422 aa15.41■□□□□ 0.06
SPIDR-211ENST00000519401 TIMELESSQ9UNS1 1208 aa15.4■□□□□ 0.06
SPIDR-211ENST00000519401 KDM5BQ9UGL1 1544 aa15.4■□□□□ 0.06
SPIDR-211ENST00000519401 GSE1Q14687 1217 aa15.39■□□□□ 0.05
SPIDR-211ENST00000519401 BRPF3Q9ULD4 1205 aa15.39■□□□□ 0.05
SPIDR-211ENST00000519401 EFCAB5A4FU69 1503 aa15.38■□□□□ 0.05
SPIDR-211ENST00000519401 VSIG10Q8N0Z9 540 aa15.38■□□□□ 0.05
SPIDR-211ENST00000519401 ABCC10Q5T3U5 1492 aa15.37■□□□□ 0.05
SPIDR-211ENST00000519401 ASXL2Q76L83 1435 aa15.37■□□□□ 0.05
SPIDR-211ENST00000519401 ZCCHC11Q5TAX3 1644 aaKnown RBP15.36■□□□□ 0.05
SPIDR-211ENST00000519401 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
SPIDR-211ENST00000519401 DIP2BQ9P265 1576 aa15.36■□□□□ 0.05
SPIDR-211ENST00000519401 RRBP1Q9P2E9 1410 aaKnown RBP15.35■□□□□ 0.05
SPIDR-211ENST00000519401 ARHGAP35Q9NRY4 1499 aa15.34■□□□□ 0.05
SPIDR-211ENST00000519401 RRP9O43818 475 aaKnown RBP15.34■□□□□ 0.05
SPIDR-211ENST00000519401 IRX6P78412 446 aaPredicted RBP15.34■□□□□ 0.05
SPIDR-211ENST00000519401 FAM69CQ0P6D2 419 aa15.34■□□□□ 0.05
SPIDR-211ENST00000519401 ARID3CA6NKF2 412 aa15.32■□□□□ 0.04
SPIDR-211ENST00000519401 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
SPIDR-211ENST00000519401 B4GALNT3Q6L9W6 998 aa15.32■□□□□ 0.04
SPIDR-211ENST00000519401 RAPGEF6Q8TEU7 1601 aa15.32■□□□□ 0.04
SPIDR-211ENST00000519401 ATP10BO94823 1461 aa15.29■□□□□ 0.04
SPIDR-211ENST00000519401 NUP153P49790 1475 aaKnown RBP15.29■□□□□ 0.04
SPIDR-211ENST00000519401 EPRSP07814 1512 aaKnown RBP15.28■□□□□ 0.04
SPIDR-211ENST00000519401 WDR7Q9Y4E6 1490 aa15.28■□□□□ 0.04
SPIDR-211ENST00000519401 KANK4Q5T7N3 995 aaPredicted RBP15.27■□□□□ 0.03
SPIDR-211ENST00000519401 GLI2P10070 1586 aa15.25■□□□□ 0.03
SPIDR-211ENST00000519401 HSP90AA2PQ14568 343 aaPredicted RBP15.23■□□□□ 0.03
SPIDR-211ENST00000519401 FMN1Q68DA7 1419 aa15.23■□□□□ 0.03
SPIDR-211ENST00000519401 ZBED9Q6R2W3 1325 aa15.22■□□□□ 0.03
SPIDR-211ENST00000519401 MAP3K1Q13233 1512 aa15.21■□□□□ 0.03
SPIDR-211ENST00000519401 DDRGK1Q96HY6 314 aa15.2■□□□□ 0.02
SPIDR-211ENST00000519401 RNF123Q5XPI4 1314 aa15.2■□□□□ 0.02
SPIDR-211ENST00000519401 CCNB3Q8WWL7 1395 aa15.2■□□□□ 0.02
SPIDR-211ENST00000519401 CDK13Q14004 1512 aaKnown RBP15.2■□□□□ 0.02
SPIDR-211ENST00000519401 TSPOAP1O95153 1857 aa15.19■□□□□ 0.02
SPIDR-211ENST00000519401 PPRC1Q5VV67 1664 aaKnown RBP15.19■□□□□ 0.02
SPIDR-211ENST00000519401 MAP3K4Q9Y6R4 1608 aa15.19■□□□□ 0.02
SPIDR-211ENST00000519401 LAS1LQ9Y4W2 734 aaKnown RBP15.18■□□□□ 0.02
SPIDR-211ENST00000519401 FGD1P98174 961 aa15.18■□□□□ 0.02
SPIDR-211ENST00000519401 FRAT1Q92837 279 aaPredicted RBP15.18■□□□□ 0.02
SPIDR-211ENST00000519401 HECW1Q76N89 1606 aa15.17■□□□□ 0.02
SPIDR-211ENST00000519401 TCERG1O14776 1098 aaKnown RBP15.17■□□□□ 0.02
SPIDR-211ENST00000519401 ATP1B4Q9UN42 357 aaPredicted RBP15.17■□□□□ 0.02
SPIDR-211ENST00000519401 AAMPQ13685 434 aa15.16■□□□□ 0.02
SPIDR-211ENST00000519401 TIAM1Q13009 1591 aa15.16■□□□□ 0.02
SPIDR-211ENST00000519401 CENPJQ9HC77 1338 aaPredicted RBP15.16■□□□□ 0.02
SPIDR-211ENST00000519401 PCF11O94913 1555 aaKnown RBP15.16■□□□□ 0.02
SPIDR-211ENST00000519401 HSP90AA1P07900 732 aaKnown RBP15.15■□□□□ 0.02
SPIDR-211ENST00000519401 MS4A1P11836 297 aa15.15■□□□□ 0.02
SPIDR-211ENST00000519401 SMG6Q86US8 1419 aaKnown RBP15.14■□□□□ 0.01
SPIDR-211ENST00000519401 CASKIN1Q8WXD9 1431 aa15.14■□□□□ 0.01
SPIDR-211ENST00000519401 NFKBIBQ15653 356 aa15.13■□□□□ 0.01
SPIDR-211ENST00000519401 CD109Q6YHK3 1445 aa15.13■□□□□ 0.01
SPIDR-211ENST00000519401 RAB3GAP2Q9H2M9 1393 aa15.13■□□□□ 0.01
SPIDR-211ENST00000519401 PLEKHD1A6NEE1 506 aa15.12■□□□□ 0.01
SPIDR-211ENST00000519401 RBM10P98175 930 aaKnown RBP15.12■□□□□ 0.01
SPIDR-211ENST00000519401 CFAP43Q8NDM7 1665 aa15.12■□□□□ 0.01
SPIDR-211ENST00000519401 LRRIQ1Q96JM4 1722 aa15.11■□□□□ 0.01
SPIDR-211ENST00000519401 ABCA9Q8IUA7 1624 aa15.1■□□□□ 0.01
SPIDR-211ENST00000519401 MAGI3Q5TCQ9 1506 aa15.1■□□□□ 0.01
SPIDR-211ENST00000519401 TEX14Q8IWB6 1497 aa15.1■□□□□ 0.01
SPIDR-211ENST00000519401 FYCO1Q9BQS8 1478 aa15.1■□□□□ 0.01
SPIDR-211ENST00000519401 KDM6BO15054 1643 aa15.1■□□□□ 0.01
SPIDR-211ENST00000519401 PDE4CQ08493 712 aa15.09■□□□□ 0.01
SPIDR-211ENST00000519401 CALD1Q05682 793 aaKnown RBP15.08■□□□□ 0.01
SPIDR-211ENST00000519401 BACH2Q9BYV9 841 aa15.08■□□□□ 0
SPIDR-211ENST00000519401 COL17A1Q9UMD9 1497 aaPredicted RBP15.07■□□□□ 0
SPIDR-211ENST00000519401 SETD5Q9C0A6 1442 aa15.07■□□□□ 0
SPIDR-211ENST00000519401 LRRC9Q6ZRR7 1453 aa15.07■□□□□ 0
SPIDR-211ENST00000519401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.06■□□□□ 0
SPIDR-211ENST00000519401 PDE4AP27815 886 aa15.05■□□□□ 0
SPIDR-211ENST00000519401 DCAF11Q8TEB1 546 aa15.05■□□□□ 0
SPIDR-211ENST00000519401 CCDC18Q5T9S5 1454 aa15.05■□□□□ 0
SPIDR-211ENST00000519401 TTC37Q6PGP7 1564 aa15.05■□□□□ 0
SPIDR-211ENST00000519401 CLCN1P35523 988 aa15.04■□□□□ -0
SPIDR-211ENST00000519401 TROQ12816 1431 aaPredicted RBP15.04■□□□□ -0
SPIDR-211ENST00000519401 NCOA2Q15596 1464 aa15.04■□□□□ -0
SPIDR-211ENST00000519401 RRAGDQ9NQL2 400 aaPredicted RBP15.04■□□□□ -0
SPIDR-211ENST00000519401 L1TD1Q5T7N2 865 aaKnown RBP15.04■□□□□ -0
SPIDR-211ENST00000519401 KIF14Q15058 1648 aa15.03■□□□□ -0
SPIDR-211ENST00000519401 PNNQ9H307 717 aaKnown RBP15.02■□□□□ -0
SPIDR-211ENST00000519401 NPM2Q86SE8 214 aaKnown RBP15.01□□□□□ -0.01
SPIDR-211ENST00000519401 PDCL3Q9H2J4 239 aa15.01□□□□□ -0.01
SPIDR-211ENST00000519401 NAP1L5Q96NT1 182 aaPredicted RBP15□□□□□ -0.01
SPIDR-211ENST00000519401 PHLDB1Q86UU1 1377 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms