RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 RIMS1Q86UR5 1692 aaKnown RBP26.02■■□□□ 1.76
VPS37A-204ENST00000519381 MAGI2Q86UL8 1455 aa26.01■■□□□ 1.75
VPS37A-204ENST00000519381 SCAPERQ9BY12 1400 aa26■■□□□ 1.75
VPS37A-204ENST00000519381 EFCAB2Q5VUJ9 269 aa25.98■■□□□ 1.75
VPS37A-204ENST00000519381 YEATS2Q9ULM3 1422 aa25.97■■□□□ 1.75
VPS37A-204ENST00000519381 PLPPR3Q6T4P5 718 aa25.96■■□□□ 1.75
VPS37A-204ENST00000519381 TROQ12816 1431 aaPredicted RBP25.96■■□□□ 1.75
VPS37A-204ENST00000519381 ARHGAP5Q13017 1502 aa25.95■■□□□ 1.74
VPS37A-204ENST00000519381 PCF11O94913 1555 aaKnown RBP25.94■■□□□ 1.74
VPS37A-204ENST00000519381 MLECQ14165 292 aa25.92■■□□□ 1.74
VPS37A-204ENST00000519381 MYT1LQ9UL68 1186 aa25.92■■□□□ 1.74
VPS37A-204ENST00000519381 CCDC18Q5T9S5 1454 aa25.89■■□□□ 1.73
VPS37A-204ENST00000519381 FER1L4A9Z1Z3 1794 aa25.88■■□□□ 1.73
VPS37A-204ENST00000519381 ZNF518AQ6AHZ1 1483 aa25.88■■□□□ 1.73
VPS37A-204ENST00000519381 C9orf84Q5VXU9 1444 aa25.87■■□□□ 1.73
VPS37A-204ENST00000519381 LRRIQ1Q96JM4 1722 aa25.86■■□□□ 1.73
VPS37A-204ENST00000519381 ATP10AO60312 1499 aa25.85■■□□□ 1.73
VPS37A-204ENST00000519381 LMTK3Q96Q04 1460 aa25.85■■□□□ 1.73
VPS37A-204ENST00000519381 CASKIN1Q8WXD9 1431 aa25.84■■□□□ 1.73
VPS37A-204ENST00000519381 SIGLEC1Q9BZZ2 1709 aa25.84■■□□□ 1.73
VPS37A-204ENST00000519381 PREX2Q70Z35 1606 aa25.78■■□□□ 1.72
VPS37A-204ENST00000519381 FYCO1Q9BQS8 1478 aa25.78■■□□□ 1.72
VPS37A-204ENST00000519381 KDM5CP41229 1560 aa25.78■■□□□ 1.72
VPS37A-204ENST00000519381 CDC42BPBQ9Y5S2 1711 aa25.77■■□□□ 1.72
VPS37A-204ENST00000519381 AFAP1Q8N556 730 aa25.76■■□□□ 1.71
VPS37A-204ENST00000519381 ARHGEF12Q9NZN5 1544 aa25.75■■□□□ 1.71
VPS37A-204ENST00000519381 HSPA2P54652 639 aa25.73■■□□□ 1.71
VPS37A-204ENST00000519381 FBXO41Q8TF61 875 aa25.73■■□□□ 1.71
VPS37A-204ENST00000519381 ABCC1P33527 1531 aa25.72■■□□□ 1.71
VPS37A-204ENST00000519381 DIP2CQ9Y2E4 1556 aa25.7■■□□□ 1.71
VPS37A-204ENST00000519381 ITSN2Q9NZM3 1697 aa25.7■■□□□ 1.7
VPS37A-204ENST00000519381 ESF1Q9H501 851 aaKnown RBP25.69■■□□□ 1.7
VPS37A-204ENST00000519381 CDC42BPAQ5VT25 1732 aa25.67■■□□□ 1.7
VPS37A-204ENST00000519381 ABCA6Q8N139 1617 aa25.66■■□□□ 1.7
VPS37A-204ENST00000519381 MLH3Q9UHC1 1453 aa25.66■■□□□ 1.7
VPS37A-204ENST00000519381 ZNF777Q9ULD5 760 aaPredicted RBP25.66■■□□□ 1.7
VPS37A-204ENST00000519381 PREX1Q8TCU6 1659 aa25.66■■□□□ 1.7
VPS37A-204ENST00000519381 REREQ9P2R6 1566 aa25.65■■□□□ 1.7
VPS37A-204ENST00000519381 TRAPPC8Q9Y2L5 1435 aa25.64■■□□□ 1.7
VPS37A-204ENST00000519381 CEBPAP49715 358 aaPredicted RBP25.61■■□□□ 1.69
VPS37A-204ENST00000519381 UHRF1BP1Q6BDS2 1440 aa25.59■■□□□ 1.69
VPS37A-204ENST00000519381 MTUS2Q5JR59 1369 aa25.58■■□□□ 1.69
VPS37A-204ENST00000519381 SYCP2Q9BX26 1530 aa25.58■■□□□ 1.68
VPS37A-204ENST00000519381 AGLP35573 1532 aa25.57■■□□□ 1.68
VPS37A-204ENST00000519381 CCNB3Q8WWL7 1395 aa25.56■■□□□ 1.68
VPS37A-204ENST00000519381 KIDINS220Q9ULH0 1771 aa25.56■■□□□ 1.68
VPS37A-204ENST00000519381 SAMD9LQ8IVG5 1584 aa25.56■■□□□ 1.68
VPS37A-204ENST00000519381 CFDP1Q9UEE9 299 aaPredicted RBP25.54■■□□□ 1.68
VPS37A-204ENST00000519381 SPAG9O60271 1321 aaKnown RBP25.54■■□□□ 1.68
VPS37A-204ENST00000519381 PLEKHH2Q8IVE3 1493 aa25.53■■□□□ 1.68
VPS37A-204ENST00000519381 GPATCH8Q9UKJ3 1502 aaKnown RBP25.53■■□□□ 1.68
VPS37A-204ENST00000519381 C3P01024 1663 aa25.52■■□□□ 1.68
VPS37A-204ENST00000519381 CNTLNQ9NXG0 1405 aa25.51■■□□□ 1.67
VPS37A-204ENST00000519381 SETD1BQ9UPS6 1966 aaKnown RBP25.5■■□□□ 1.67
VPS37A-204ENST00000519381 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.671e-6■■■□□ 19.1
VPS37A-204ENST00000519381 DMRT2Q9Y5R5 561 aa25.49■■□□□ 1.67
VPS37A-204ENST00000519381 ATP7AQ04656 1500 aa25.47■■□□□ 1.67
VPS37A-204ENST00000519381 EHBP1L1Q8N3D4 1523 aa25.46■■□□□ 1.67
VPS37A-204ENST00000519381 KIAA1107Q9UPP5 1409 aa25.46■■□□□ 1.67
VPS37A-204ENST00000519381 CERKQ8TCT0 537 aa25.45■■□□□ 1.66
VPS37A-204ENST00000519381 SUPT6HQ7KZ85 1726 aaKnown RBP25.45■■□□□ 1.66
VPS37A-204ENST00000519381 CEP162Q5TB80 1403 aa25.42■■□□□ 1.66
VPS37A-204ENST00000519381 INO80Q9ULG1 1556 aaPredicted RBP25.41■■□□□ 1.66
VPS37A-204ENST00000519381 TIAM1Q13009 1591 aa25.39■■□□□ 1.66
VPS37A-204ENST00000519381 MROH2AA6NES4 1674 aa25.39■■□□□ 1.66
VPS37A-204ENST00000519381 A2MP01023 1474 aa25.39■■□□□ 1.65
VPS37A-204ENST00000519381 STRCQ7RTU9 1775 aa25.38■■□□□ 1.65
VPS37A-204ENST00000519381 PLXNC1O60486 1568 aa25.35■■□□□ 1.65
VPS37A-204ENST00000519381 ADGBQ8N7X0 1667 aa25.34■■□□□ 1.65
VPS37A-204ENST00000519381 CLTCQ00610 1675 aaKnown RBP25.33■■□□□ 1.65
VPS37A-204ENST00000519381 NPATQ14207 1427 aa25.33■■□□□ 1.65
VPS37A-204ENST00000519381 GGT6Q6P531 493 aa25.33■■□□□ 1.65
VPS37A-204ENST00000519381 ZMYM3Q14202 1370 aa25.32■■□□□ 1.64
VPS37A-204ENST00000519381 PTPRTO14522 1441 aa25.3■■□□□ 1.64
VPS37A-204ENST00000519381 ZNF644Q9H582 1327 aaPredicted RBP25.3■■□□□ 1.64
VPS37A-204ENST00000519381 NCOA1Q15788 1441 aa25.27■■□□□ 1.64
VPS37A-204ENST00000519381 NCOA2Q15596 1464 aa25.25■■□□□ 1.63
VPS37A-204ENST00000519381 CAMSAP1Q5T5Y3 1602 aa25.25■■□□□ 1.63
VPS37A-204ENST00000519381 CCDC141Q6ZP82 1450 aa25.24■■□□□ 1.63
VPS37A-204ENST00000519381 RTEL1-TNFRSF6BF6WH68 1400 aa25.24■■□□□ 1.63
VPS37A-204ENST00000519381 MYO3AQ8NEV4 1616 aa25.23■■□□□ 1.63
VPS37A-204ENST00000519381 CAMSAP2Q08AD1 1489 aa25.23■■□□□ 1.63
VPS37A-204ENST00000519381 MBD5Q9P267 1494 aa25.23■■□□□ 1.63
VPS37A-204ENST00000519381 PPP6R1Q9UPN7 881 aa25.23■■□□□ 1.63
VPS37A-204ENST00000519381 ZNF142P52746 1687 aaPredicted RBP25.2■■□□□ 1.62
VPS37A-204ENST00000519381 PTPRKQ15262 1439 aa25.19■■□□□ 1.62
VPS37A-204ENST00000519381 CEP170BQ9Y4F5 1589 aaPredicted RBP25.18■■□□□ 1.62
VPS37A-204ENST00000519381 RSPH4AQ5TD94 716 aa25.18■■□□□ 1.62
VPS37A-204ENST00000519381 DHX29Q7Z478 1369 aaKnown RBP25.18■■□□□ 1.62
VPS37A-204ENST00000519381 VPS8Q8N3P4 1428 aa25.16■■□□□ 1.62
VPS37A-204ENST00000519381 KIF3BO15066 747 aa25.15■■□□□ 1.62
VPS37A-204ENST00000519381 TSPY4P0CV99 314 aa25.14■■□□□ 1.62
VPS37A-204ENST00000519381 TSPY10P0CW01 314 aa25.14■■□□□ 1.62
VPS37A-204ENST00000519381 NCKAP5LQ9HCH0 1330 aa25.13■■□□□ 1.61
VPS37A-204ENST00000519381 PLA2R1Q13018 1463 aa25.13■■□□□ 1.61
VPS37A-204ENST00000519381 KDM5DQ9BY66 1539 aa25.12■■□□□ 1.61
VPS37A-204ENST00000519381 PKD2Q13563 968 aa25.12■■□□□ 1.61
VPS37A-204ENST00000519381 ARHGEF5Q12774 1597 aa25.11■■□□□ 1.61
VPS37A-204ENST00000519381 FAM135AQ9P2D6 1515 aa25.11■■□□□ 1.61
VPS37A-204ENST00000519381 LRRC9Q6ZRR7 1453 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms