RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CCER1Q8TC90 406 aaPredicted RBP21.76■■□□□ 1.07
CLN8-204ENST00000519254 CDC42BPBQ9Y5S2 1711 aa21.75■■□□□ 1.07
CLN8-204ENST00000519254 ZNF644Q9H582 1327 aaPredicted RBP21.75■■□□□ 1.07
CLN8-204ENST00000519254 TCOF1Q13428 1488 aaKnown RBP21.74■■□□□ 1.07
CLN8-204ENST00000519254 ABCA9Q8IUA7 1624 aa21.74■■□□□ 1.07
CLN8-204ENST00000519254 ARHGAP5Q13017 1502 aa21.74■■□□□ 1.07
CLN8-204ENST00000519254 CAMSAP2Q08AD1 1489 aa21.73■■□□□ 1.07
CLN8-204ENST00000519254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.71■■□□□ 1.07
CLN8-204ENST00000519254 PLCH2O75038 1416 aa21.7■■□□□ 1.06
CLN8-204ENST00000519254 SAMD9LQ8IVG5 1584 aa21.66■■□□□ 1.06
CLN8-204ENST00000519254 DIP2BQ9P265 1576 aa21.65■■□□□ 1.06
CLN8-204ENST00000519254 CD109Q6YHK3 1445 aa21.64■■□□□ 1.05
CLN8-204ENST00000519254 FAM69CQ0P6D2 419 aa21.63■■□□□ 1.05
CLN8-204ENST00000519254 EFCAB2Q5VUJ9 269 aa21.63■■□□□ 1.05
CLN8-204ENST00000519254 ARAP3Q8WWN8 1544 aa21.62■■□□□ 1.05
CLN8-204ENST00000519254 DNMT1P26358 1616 aaKnown RBP21.61■■□□□ 1.05
CLN8-204ENST00000519254 GLI2P10070 1586 aa21.61■■□□□ 1.05
CLN8-204ENST00000519254 FANCAO15360 1455 aa21.61■■□□□ 1.05
CLN8-204ENST00000519254 PTPRKQ15262 1439 aa21.61■■□□□ 1.05
CLN8-204ENST00000519254 DAPK1P53355 1430 aa21.6■■□□□ 1.05
CLN8-204ENST00000519254 SYCP2Q9BX26 1530 aa21.6■■□□□ 1.05
CLN8-204ENST00000519254 HNRNPMP52272 730 aaKnown RBP eCLIP21.59■■□□□ 1.056e-8■□□□□ 11
CLN8-204ENST00000519254 MAP3K4Q9Y6R4 1608 aa21.59■■□□□ 1.05
CLN8-204ENST00000519254 CHIC2Q9UKJ5 165 aa21.59■■□□□ 1.05
CLN8-204ENST00000519254 ABCC5O15440 1437 aa21.58■■□□□ 1.04
CLN8-204ENST00000519254 PLEKHH2Q8IVE3 1493 aa21.56■■□□□ 1.04
CLN8-204ENST00000519254 ABCC1P33527 1531 aa21.55■■□□□ 1.04
CLN8-204ENST00000519254 KIF13AQ9H1H9 1805 aa21.54■■□□□ 1.04
CLN8-204ENST00000519254 CROCC2H7BZ55 1655 aa21.54■■□□□ 1.04
CLN8-204ENST00000519254 MBD5Q9P267 1494 aa21.54■■□□□ 1.04
CLN8-204ENST00000519254 ARHGEF5Q12774 1597 aa21.53■■□□□ 1.04
CLN8-204ENST00000519254 ARHGEF12Q9NZN5 1544 aa21.53■■□□□ 1.04
CLN8-204ENST00000519254 CFAP74Q9C0B2 1584 aa21.53■■□□□ 1.04
CLN8-204ENST00000519254 TSPOAP1O95153 1857 aa21.53■■□□□ 1.04
CLN8-204ENST00000519254 KIAA1107Q9UPP5 1409 aa21.52■■□□□ 1.04
CLN8-204ENST00000519254 ADGRL1O94910 1474 aa21.51■■□□□ 1.03
CLN8-204ENST00000519254 CCDC141Q6ZP82 1450 aa21.51■■□□□ 1.03
CLN8-204ENST00000519254 AKNAQ7Z591 1439 aa21.51■■□□□ 1.03
CLN8-204ENST00000519254 RRP7BPQ9NSQ0 103 aa21.49■■□□□ 1.03
CLN8-204ENST00000519254 SCAPERQ9BY12 1400 aa21.48■■□□□ 1.03
CLN8-204ENST00000519254 TSPY4P0CV99 314 aa21.48■■□□□ 1.03
CLN8-204ENST00000519254 TSPY10P0CW01 314 aa21.48■■□□□ 1.03
CLN8-204ENST00000519254 DHX57Q6P158 1386 aaKnown RBP21.47■■□□□ 1.03
CLN8-204ENST00000519254 C9orf84Q5VXU9 1444 aa21.47■■□□□ 1.03
CLN8-204ENST00000519254 TRAPPC8Q9Y2L5 1435 aa21.47■■□□□ 1.03
CLN8-204ENST00000519254 ADGBQ8N7X0 1667 aa21.47■■□□□ 1.03
CLN8-204ENST00000519254 SETD5Q9C0A6 1442 aa21.47■■□□□ 1.03
CLN8-204ENST00000519254 SHANK2Q9UPX8 1470 aa21.46■■□□□ 1.03
CLN8-204ENST00000519254 RSPH4AQ5TD94 716 aa21.46■■□□□ 1.03
CLN8-204ENST00000519254 RAB3GAP2Q9H2M9 1393 aa21.46■■□□□ 1.03
CLN8-204ENST00000519254 NEO1Q92859 1461 aa21.46■■□□□ 1.03
CLN8-204ENST00000519254 PPRC1Q5VV67 1664 aaKnown RBP21.46■■□□□ 1.03
CLN8-204ENST00000519254 HFM1A2PYH4 1435 aa21.45■■□□□ 1.02
CLN8-204ENST00000519254 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
CLN8-204ENST00000519254 NAIPQ13075 1403 aa21.43■■□□□ 1.02
CLN8-204ENST00000519254 ROCK1Q13464 1354 aa21.43■■□□□ 1.02
CLN8-204ENST00000519254 AFAP1Q8N556 730 aa21.43■■□□□ 1.02
CLN8-204ENST00000519254 TEX14Q8IWB6 1497 aa21.42■■□□□ 1.02
CLN8-204ENST00000519254 GCC2Q8IWJ2 1684 aa21.42■■□□□ 1.02
CLN8-204ENST00000519254 ANKRD30AQ9BXX3 1397 aa21.41■■□□□ 1.02
CLN8-204ENST00000519254 ADGRL2O95490 1459 aa21.41■■□□□ 1.02
CLN8-204ENST00000519254 NCOA1Q15788 1441 aa21.4■■□□□ 1.02
CLN8-204ENST00000519254 MAST1Q9Y2H9 1570 aa21.39■■□□□ 1.01
CLN8-204ENST00000519254 SPAG9O60271 1321 aaKnown RBP21.38■■□□□ 1.01
CLN8-204ENST00000519254 CLSPNQ9HAW4 1339 aa21.38■■□□□ 1.01
CLN8-204ENST00000519254 POGZQ7Z3K3 1410 aa21.38■■□□□ 1.01
CLN8-204ENST00000519254 ZNF518AQ6AHZ1 1483 aa21.37■■□□□ 1.01
CLN8-204ENST00000519254 MYT1LQ9UL68 1186 aa21.37■■□□□ 1.01
CLN8-204ENST00000519254 DENND4BO75064 1496 aaPredicted RBP21.36■■□□□ 1.01
CLN8-204ENST00000519254 KDM6BO15054 1643 aa21.35■■□□□ 1.01
CLN8-204ENST00000519254 KIF15Q9NS87 1388 aa21.35■■□□□ 1.01
CLN8-204ENST00000519254 ZFYVE16Q7Z3T8 1539 aa21.34■■□□□ 1.01
CLN8-204ENST00000519254 RAPGEF3O95398 923 aa21.34■■□□□ 1.01
CLN8-204ENST00000519254 ATP7AQ04656 1500 aa21.33■■□□□ 1
CLN8-204ENST00000519254 PLXNC1O60486 1568 aa21.32■■□□□ 1
CLN8-204ENST00000519254 INO80Q9ULG1 1556 aaPredicted RBP21.32■■□□□ 1
CLN8-204ENST00000519254 KDM5CP41229 1560 aa21.31■■□□□ 1
CLN8-204ENST00000519254 RICTORQ6R327 1708 aa21.31■■□□□ 1
CLN8-204ENST00000519254 RTEL1-TNFRSF6BF6WH68 1400 aa21.3■■□□□ 1
CLN8-204ENST00000519254 ANKRD50Q9ULJ7 1429 aa21.29■■□□□ 1
CLN8-204ENST00000519254 HECW2Q9P2P5 1572 aa21.28■■□□□ 1
CLN8-204ENST00000519254 FRMPD1Q5SYB0 1578 aa21.28■■□□□ 1
CLN8-204ENST00000519254 KIDINS220Q9ULH0 1771 aa21.26■□□□□ 0.99
CLN8-204ENST00000519254 TRIM52Q96A61 297 aa21.25■□□□□ 0.99
CLN8-204ENST00000519254 DUOX2Q9NRD8 1548 aa21.24■□□□□ 0.99
CLN8-204ENST00000519254 MLH3Q9UHC1 1453 aa21.24■□□□□ 0.99
CLN8-204ENST00000519254 COL17A1Q9UMD9 1497 aaPredicted RBP21.22■□□□□ 0.99
CLN8-204ENST00000519254 ABCA6Q8N139 1617 aa21.2■□□□□ 0.98
CLN8-204ENST00000519254 ERBINQ96RT1 1412 aa21.19■□□□□ 0.98
CLN8-204ENST00000519254 ZMYM4Q5VZL5 1548 aa21.19■□□□□ 0.98
CLN8-204ENST00000519254 YEATS2Q9ULM3 1422 aa21.17■□□□□ 0.98
CLN8-204ENST00000519254 DIP2CQ9Y2E4 1556 aa21.16■□□□□ 0.98
CLN8-204ENST00000519254 A2MP01023 1474 aa21.15■□□□□ 0.98
CLN8-204ENST00000519254 DHX29Q7Z478 1369 aaKnown RBP21.14■□□□□ 0.97
CLN8-204ENST00000519254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.13■□□□□ 0.97
CLN8-204ENST00000519254 MAGI2Q86UL8 1455 aa21.12■□□□□ 0.97
CLN8-204ENST00000519254 ACIN1Q9UKV3 1341 aaKnown RBP21.12■□□□□ 0.97
CLN8-204ENST00000519254 NUP155O75694 1391 aa21.11■□□□□ 0.97
CLN8-204ENST00000519254 UNC13BO14795 1591 aa21.1■□□□□ 0.97
CLN8-204ENST00000519254 KIF3BO15066 747 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms