RNA–Protein interactions for RNA: ENST00000519245.1

LAMA4-212, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-212ENST00000519245 RIOK3O14730 519 aaKnown RBP13.45□□□□□ -0.26
LAMA4-212ENST00000519245 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.44□□□□□ -0.26
LAMA4-212ENST00000519245 ZFP91Q96JP5 570 aaPredicted RBP13.44□□□□□ -0.26
LAMA4-212ENST00000519245 MYT1LQ9UL68 1186 aa13.44□□□□□ -0.26
LAMA4-212ENST00000519245 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
LAMA4-212ENST00000519245 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
LAMA4-212ENST00000519245 ARSIQ5FYB1 569 aa13.37□□□□□ -0.27
LAMA4-212ENST00000519245 KHSRPQ92945 711 aaKnown RBP eCLIP13.34□□□□□ -0.27
LAMA4-212ENST00000519245 PTGER2P43116 358 aa13.31□□□□□ -0.28
LAMA4-212ENST00000519245 FBXO22Q8NEZ5 403 aa13.31□□□□□ -0.28
LAMA4-212ENST00000519245 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
LAMA4-212ENST00000519245 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
LAMA4-212ENST00000519245 NLRP6P59044 892 aa13.26□□□□□ -0.29
LAMA4-212ENST00000519245 LSM11P83369 360 aaKnown RBP eCLIP13.24□□□□□ -0.29
LAMA4-212ENST00000519245 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
LAMA4-212ENST00000519245 KIF3CO14782 793 aa13.23□□□□□ -0.29
LAMA4-212ENST00000519245 MFRPQ9BY79 579 aa13.21□□□□□ -0.29
LAMA4-212ENST00000519245 C2orf72A6NCS6 295 aa13.18□□□□□ -0.3
LAMA4-212ENST00000519245 NUDT7P0C024 238 aa13.17□□□□□ -0.3
LAMA4-212ENST00000519245 POTEEQ6S8J3 1075 aa13.17□□□□□ -0.3
LAMA4-212ENST00000519245 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
LAMA4-212ENST00000519245 PBX2P40425 430 aa13.13□□□□□ -0.31
LAMA4-212ENST00000519245 LHX6Q9UPM6 363 aa13.12□□□□□ -0.31
LAMA4-212ENST00000519245 AXIN2Q9Y2T1 843 aa13.11□□□□□ -0.31
LAMA4-212ENST00000519245 SLC34A2O95436 690 aa13.1□□□□□ -0.31
LAMA4-212ENST00000519245 TAOK2Q9UL54 1235 aa13.1□□□□□ -0.31
LAMA4-212ENST00000519245 PCDHGA4Q9Y5G9 962 aa13.1□□□□□ -0.31
LAMA4-212ENST00000519245 STK25O00506 426 aa13.08□□□□□ -0.32
LAMA4-212ENST00000519245 TMC2Q8TDI7 906 aa13□□□□□ -0.33
LAMA4-212ENST00000519245 PLA2G2EQ9NZK7 142 aa12.99□□□□□ -0.33
LAMA4-212ENST00000519245 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
LAMA4-212ENST00000519245 ADGRD1Q6QNK2 874 aa12.98□□□□□ -0.33
LAMA4-212ENST00000519245 HCSTQ9UBK5 93 aa12.97□□□□□ -0.33
LAMA4-212ENST00000519245 ARHGAP33O14559 1287 aa12.96□□□□□ -0.33
LAMA4-212ENST00000519245 PPP1R37O75864 691 aa12.96□□□□□ -0.33
LAMA4-212ENST00000519245 ECM2O94769 699 aaPredicted RBP12.95□□□□□ -0.34
LAMA4-212ENST00000519245 RGL2O15211 777 aa12.93□□□□□ -0.34
LAMA4-212ENST00000519245 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
LAMA4-212ENST00000519245 HRO43593 1189 aa12.9□□□□□ -0.34
LAMA4-212ENST00000519245 DMRTA1Q5VZB9 504 aa12.9□□□□□ -0.34
LAMA4-212ENST00000519245 PKD2Q13563 968 aa12.89□□□□□ -0.35
LAMA4-212ENST00000519245 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
LAMA4-212ENST00000519245 TK2O00142 265 aa12.88□□□□□ -0.35
LAMA4-212ENST00000519245 PSEN2P49810 448 aa12.88□□□□□ -0.35
LAMA4-212ENST00000519245 FOXK1P85037 733 aa12.82□□□□□ -0.36
LAMA4-212ENST00000519245 PLPP6Q8IY26 295 aa12.81□□□□□ -0.36
LAMA4-212ENST00000519245 PPP4R3BQ5MIZ7 849 aa12.79□□□□□ -0.36
LAMA4-212ENST00000519245 KCTD12Q96CX2 325 aaKnown RBP12.78□□□□□ -0.36
LAMA4-212ENST00000519245 GPHNQ9NQX3 736 aaPredicted RBP12.78□□□□□ -0.36
LAMA4-212ENST00000519245 DSG2Q14126 1118 aa12.77□□□□□ -0.37
LAMA4-212ENST00000519245 KCNK17Q96T54 332 aa12.74□□□□□ -0.37
LAMA4-212ENST00000519245 TBC1D12O60347 775 aa12.69□□□□□ -0.38
LAMA4-212ENST00000519245 VPS9D1Q9Y2B5 631 aa12.69□□□□□ -0.38
LAMA4-212ENST00000519245 OXER1Q8TDS5 423 aa12.66□□□□□ -0.38
LAMA4-212ENST00000519245 STAC3Q96MF2 364 aa12.66□□□□□ -0.38
LAMA4-212ENST00000519245 HS6ST3Q8IZP7 471 aa12.65□□□□□ -0.38
LAMA4-212ENST00000519245 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
LAMA4-212ENST00000519245 PTPN5P54829 565 aa12.63□□□□□ -0.39
LAMA4-212ENST00000519245 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
LAMA4-212ENST00000519245 BCL2L12Q9HB09 334 aa12.61□□□□□ -0.39
LAMA4-212ENST00000519245 ZNF454Q8N9F8 522 aa12.6□□□□□ -0.39
LAMA4-212ENST00000519245 UPF1Q92900 1129 aaKnown RBP eCLIP12.6□□□□□ -0.39
LAMA4-212ENST00000519245 BHMG1C9JSJ3 638 aaPredicted RBP12.59□□□□□ -0.39
LAMA4-212ENST00000519245 IFFO2Q5TF58 517 aa12.58□□□□□ -0.4
LAMA4-212ENST00000519245 THSD4Q6ZMP0 1018 aa12.57□□□□□ -0.4
LAMA4-212ENST00000519245 FOSBP53539 338 aa12.56□□□□□ -0.4
LAMA4-212ENST00000519245 CRISPLD2Q9H0B8 497 aa12.56□□□□□ -0.4
LAMA4-212ENST00000519245 RGS20O76081 388 aa12.54□□□□□ -0.4
LAMA4-212ENST00000519245 ZBED2Q9BTP6 218 aa12.54□□□□□ -0.4
LAMA4-212ENST00000519245 NKX1-1Q15270 411 aaPredicted RBP12.53□□□□□ -0.4
LAMA4-212ENST00000519245 PPP1R15BQ5SWA1 713 aa12.52□□□□□ -0.41
LAMA4-212ENST00000519245 A0A0G2JS52 829 aa12.51□□□□□ -0.41
LAMA4-212ENST00000519245 PTPREP23469 700 aa12.51□□□□□ -0.41
LAMA4-212ENST00000519245 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
LAMA4-212ENST00000519245 WNT2BQ93097 391 aa12.49□□□□□ -0.41
LAMA4-212ENST00000519245 JPH4Q96JJ6 628 aa12.49□□□□□ -0.41
LAMA4-212ENST00000519245 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
LAMA4-212ENST00000519245 NCKAP5LQ9HCH0 1330 aa12.48□□□□□ -0.41
LAMA4-212ENST00000519245 ANO8Q9HCE9 1232 aaPredicted RBP12.48□□□□□ -0.41
LAMA4-212ENST00000519245 MRPL50Q8N5N7 158 aaKnown RBP12.47□□□□□ -0.41
LAMA4-212ENST00000519245 ADAM33Q9BZ11 813 aa12.47□□□□□ -0.41
LAMA4-212ENST00000519245 IRX2Q9BZI1 471 aaPredicted RBP12.46□□□□□ -0.41
LAMA4-212ENST00000519245 GOLGA8CPA6NN73 597 aa12.44□□□□□ -0.42
LAMA4-212ENST00000519245 EVI5O60447 810 aa12.43□□□□□ -0.42
LAMA4-212ENST00000519245 ZDHHC16Q969W1 377 aa12.43□□□□□ -0.42
LAMA4-212ENST00000519245 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
LAMA4-212ENST00000519245 RYDENQ9NUL5 291 aaKnown RBP12.38□□□□□ -0.43
LAMA4-212ENST00000519245 PDE4AP27815 886 aa12.37□□□□□ -0.43
LAMA4-212ENST00000519245 PPP1R3GB7ZBB8 358 aa12.34□□□□□ -0.43
LAMA4-212ENST00000519245 ITGBL1O95965 494 aaPredicted RBP12.34□□□□□ -0.43
LAMA4-212ENST00000519245 PROX2Q3B8N5 592 aa12.34□□□□□ -0.43
LAMA4-212ENST00000519245 COL9A1P20849 921 aa12.32□□□□□ -0.44
LAMA4-212ENST00000519245 RABGEF1Q9UJ41 708 aa12.32□□□□□ -0.44
LAMA4-212ENST00000519245 PCDHGA10Q9Y5H3 936 aa12.32□□□□□ -0.44
LAMA4-212ENST00000519245 DDX27Q96GQ7 796 aaKnown RBP12.31□□□□□ -0.44
LAMA4-212ENST00000519245 LARP6Q9BRS8 491 aaKnown RBP12.31□□□□□ -0.44
LAMA4-212ENST00000519245 ANKK1Q8NFD2 765 aa12.3□□□□□ -0.44
LAMA4-212ENST00000519245 EMILIN3Q9NT22 766 aa12.3□□□□□ -0.44
LAMA4-212ENST00000519245 BCAMP50895 628 aa12.29□□□□□ -0.44
LAMA4-212ENST00000519245 MAP3K9P80192 1104 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms