RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 POGZQ7Z3K3 1410 aa14.61□□□□□ -0.07
TRIM35-202ENST00000519219 PLCH2O75038 1416 aa14.6□□□□□ -0.07
TRIM35-202ENST00000519219 SCAPERQ9BY12 1400 aa14.6□□□□□ -0.07
TRIM35-202ENST00000519219 HSPA2P54652 639 aa14.59□□□□□ -0.07
TRIM35-202ENST00000519219 ATP1B4Q9UN42 357 aaPredicted RBP14.59□□□□□ -0.07
TRIM35-202ENST00000519219 UBTFP17480 764 aaKnown RBP14.58□□□□□ -0.08
TRIM35-202ENST00000519219 MLECQ14165 292 aa14.58□□□□□ -0.08
TRIM35-202ENST00000519219 FBXO41Q8TF61 875 aa14.57□□□□□ -0.08
TRIM35-202ENST00000519219 MAGI2Q86UL8 1455 aa14.57□□□□□ -0.08
TRIM35-202ENST00000519219 FMN1Q68DA7 1419 aa14.56□□□□□ -0.08
TRIM35-202ENST00000519219 CHIC1Q5VXU3 224 aa14.54□□□□□ -0.08
TRIM35-202ENST00000519219 ARHGEF12Q9NZN5 1544 aa14.54□□□□□ -0.08
TRIM35-202ENST00000519219 CDC42BPBQ9Y5S2 1711 aa14.54□□□□□ -0.08
TRIM35-202ENST00000519219 ARHGAP5Q13017 1502 aa14.52□□□□□ -0.08
TRIM35-202ENST00000519219 ATP10AO60312 1499 aa14.52□□□□□ -0.08
TRIM35-202ENST00000519219 TROQ12816 1431 aaPredicted RBP14.52□□□□□ -0.08
TRIM35-202ENST00000519219 KDM5CP41229 1560 aa14.51□□□□□ -0.09
TRIM35-202ENST00000519219 C9orf84Q5VXU9 1444 aa14.51□□□□□ -0.09
TRIM35-202ENST00000519219 EFCAB2Q5VUJ9 269 aa14.51□□□□□ -0.09
TRIM35-202ENST00000519219 ABCA6Q8N139 1617 aa14.5□□□□□ -0.09
TRIM35-202ENST00000519219 DIP2CQ9Y2E4 1556 aa14.5□□□□□ -0.09
TRIM35-202ENST00000519219 CEBPAP49715 358 aaPredicted RBP14.49□□□□□ -0.09
TRIM35-202ENST00000519219 AFAP1Q8N556 730 aa14.49□□□□□ -0.09
TRIM35-202ENST00000519219 PREX1Q8TCU6 1659 aa14.49□□□□□ -0.09
TRIM35-202ENST00000519219 PREX2Q70Z35 1606 aa14.48□□□□□ -0.09
TRIM35-202ENST00000519219 ZNF518AQ6AHZ1 1483 aa14.48□□□□□ -0.09
TRIM35-202ENST00000519219 ITSN2Q9NZM3 1697 aa14.47□□□□□ -0.09
TRIM35-202ENST00000519219 CDC42BPAQ5VT25 1732 aa14.46□□□□□ -0.09
TRIM35-202ENST00000519219 STRCQ7RTU9 1775 aa14.46□□□□□ -0.09
TRIM35-202ENST00000519219 CLIP1P30622 1438 aa14.46□□□□□ -0.09
TRIM35-202ENST00000519219 ABCC1P33527 1531 aa14.46□□□□□ -0.1
TRIM35-202ENST00000519219 CDK11AQ9UQ88 783 aaPredicted RBP14.45□□□□□ -0.1
TRIM35-202ENST00000519219 TRAPPC8Q9Y2L5 1435 aa14.45□□□□□ -0.1
TRIM35-202ENST00000519219 C3P01024 1663 aa14.44□□□□□ -0.1
TRIM35-202ENST00000519219 KIDINS220Q9ULH0 1771 aa14.43□□□□□ -0.1
TRIM35-202ENST00000519219 CASKIN1Q8WXD9 1431 aa14.42□□□□□ -0.1
TRIM35-202ENST00000519219 REREQ9P2R6 1566 aa14.42□□□□□ -0.1
TRIM35-202ENST00000519219 SETD1BQ9UPS6 1966 aaKnown RBP14.41□□□□□ -0.1
TRIM35-202ENST00000519219 CCDC18Q5T9S5 1454 aa14.4□□□□□ -0.1
TRIM35-202ENST00000519219 MLH3Q9UHC1 1453 aa14.4□□□□□ -0.1
TRIM35-202ENST00000519219 MYT1LQ9UL68 1186 aa14.4□□□□□ -0.1
TRIM35-202ENST00000519219 CERKQ8TCT0 537 aa14.39□□□□□ -0.11
TRIM35-202ENST00000519219 SAMD9LQ8IVG5 1584 aa14.39□□□□□ -0.11
TRIM35-202ENST00000519219 AGLP35573 1532 aa14.37□□□□□ -0.11
TRIM35-202ENST00000519219 FYCO1Q9BQS8 1478 aa14.37□□□□□ -0.11
TRIM35-202ENST00000519219 SYCP2Q9BX26 1530 aa14.36□□□□□ -0.11
TRIM35-202ENST00000519219 UHRF1BP1Q6BDS2 1440 aa14.36□□□□□ -0.11
TRIM35-202ENST00000519219 SUPT6HQ7KZ85 1726 aaKnown RBP14.35□□□□□ -0.11
TRIM35-202ENST00000519219 GPATCH8Q9UKJ3 1502 aaKnown RBP14.33□□□□□ -0.12
TRIM35-202ENST00000519219 ZNF777Q9ULD5 760 aaPredicted RBP14.32□□□□□ -0.12
TRIM35-202ENST00000519219 SOCS7O14512 581 aa14.3□□□□□ -0.12
TRIM35-202ENST00000519219 HNRNPMP52272 730 aaKnown RBP eCLIP14.3□□□□□ -0.12
TRIM35-202ENST00000519219 INO80Q9ULG1 1556 aaPredicted RBP14.3□□□□□ -0.12
TRIM35-202ENST00000519219 MROH2AA6NES4 1674 aa14.3□□□□□ -0.12
TRIM35-202ENST00000519219 ATP7AQ04656 1500 aa14.29□□□□□ -0.12
TRIM35-202ENST00000519219 CLTCQ00610 1675 aaKnown RBP14.29□□□□□ -0.12
TRIM35-202ENST00000519219 PLXNC1O60486 1568 aa14.28□□□□□ -0.12
TRIM35-202ENST00000519219 LTBP4Q8N2S1 1624 aa14.26□□□□□ -0.13
TRIM35-202ENST00000519219 PTPRTO14522 1441 aa14.26□□□□□ -0.13
TRIM35-202ENST00000519219 NCOA1Q15788 1441 aa14.26□□□□□ -0.13
TRIM35-202ENST00000519219 SPAG9O60271 1321 aaKnown RBP14.26□□□□□ -0.13
TRIM35-202ENST00000519219 TIAM1Q13009 1591 aa14.26□□□□□ -0.13
TRIM35-202ENST00000519219 CNTLNQ9NXG0 1405 aa14.25□□□□□ -0.13
TRIM35-202ENST00000519219 ESF1Q9H501 851 aaKnown RBP14.25□□□□□ -0.13
TRIM35-202ENST00000519219 CAMSAP1Q5T5Y3 1602 aa14.25□□□□□ -0.13
TRIM35-202ENST00000519219 ZNF644Q9H582 1327 aaPredicted RBP14.24□□□□□ -0.13
TRIM35-202ENST00000519219 MYO3AQ8NEV4 1616 aa14.24□□□□□ -0.13
TRIM35-202ENST00000519219 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
TRIM35-202ENST00000519219 ZMYM3Q14202 1370 aa14.23□□□□□ -0.13
TRIM35-202ENST00000519219 CCNB3Q8WWL7 1395 aa14.23□□□□□ -0.13
TRIM35-202ENST00000519219 CFDP1Q9UEE9 299 aaPredicted RBP14.23□□□□□ -0.13
TRIM35-202ENST00000519219 A2MP01023 1474 aa14.23□□□□□ -0.13
TRIM35-202ENST00000519219 ZNF142P52746 1687 aaPredicted RBP14.23□□□□□ -0.13
TRIM35-202ENST00000519219 KIAA1107Q9UPP5 1409 aa14.23□□□□□ -0.13
TRIM35-202ENST00000519219 ADGBQ8N7X0 1667 aa14.22□□□□□ -0.13
TRIM35-202ENST00000519219 NPATQ14207 1427 aa14.22□□□□□ -0.13
TRIM35-202ENST00000519219 MTUS2Q5JR59 1369 aa14.22□□□□□ -0.13
TRIM35-202ENST00000519219 PLEKHH2Q8IVE3 1493 aa14.2□□□□□ -0.14
TRIM35-202ENST00000519219 MBD5Q9P267 1494 aa14.19□□□□□ -0.14
TRIM35-202ENST00000519219 NCKAP5LQ9HCH0 1330 aa14.19□□□□□ -0.14
TRIM35-202ENST00000519219 PTPRKQ15262 1439 aa14.19□□□□□ -0.14
TRIM35-202ENST00000519219 EHBP1L1Q8N3D4 1523 aa14.19□□□□□ -0.14
TRIM35-202ENST00000519219 CEP170BQ9Y4F5 1589 aaPredicted RBP14.18□□□□□ -0.14
TRIM35-202ENST00000519219 GGT6Q6P531 493 aa14.18□□□□□ -0.14
TRIM35-202ENST00000519219 ILDR2Q71H61 639 aa14.18□□□□□ -0.14
TRIM35-202ENST00000519219 DISP3Q9P2K9 1392 aa14.16□□□□□ -0.14
TRIM35-202ENST00000519219 ZNF335Q9H4Z2 1342 aaPredicted RBP14.15□□□□□ -0.14
TRIM35-202ENST00000519219 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
TRIM35-202ENST00000519219 TCOF1Q13428 1488 aaKnown RBP14.14□□□□□ -0.15
TRIM35-202ENST00000519219 SPATA31D1Q6ZQQ2 1576 aa14.13□□□□□ -0.15
TRIM35-202ENST00000519219 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
TRIM35-202ENST00000519219 PLA2R1Q13018 1463 aa14.12□□□□□ -0.15
TRIM35-202ENST00000519219 IQSEC2Q5JU85 1478 aa14.12□□□□□ -0.15
TRIM35-202ENST00000519219 DNMT1P26358 1616 aaKnown RBP14.12□□□□□ -0.15
TRIM35-202ENST00000519219 NCOA2Q15596 1464 aa14.12□□□□□ -0.15
TRIM35-202ENST00000519219 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
TRIM35-202ENST00000519219 RTEL1-TNFRSF6BF6WH68 1400 aa14.1□□□□□ -0.15
TRIM35-202ENST00000519219 A2ML1A8K2U0 1454 aa14.1□□□□□ -0.15
TRIM35-202ENST00000519219 CCDC141Q6ZP82 1450 aa14.1□□□□□ -0.15
TRIM35-202ENST00000519219 DHX29Q7Z478 1369 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms