RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 TSPOAP1O95153 1857 aa18.52■□□□□ 0.56
SPIDR-209ENST00000519141 CFDP1Q9UEE9 299 aaPredicted RBP18.52■□□□□ 0.56
SPIDR-209ENST00000519141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.52■□□□□ 0.56
SPIDR-209ENST00000519141 CCER1Q8TC90 406 aaPredicted RBP18.51■□□□□ 0.55
SPIDR-209ENST00000519141 MYO5CQ9NQX4 1742 aa18.51■□□□□ 0.55
SPIDR-209ENST00000519141 DNMT1P26358 1616 aaKnown RBP18.51■□□□□ 0.55
SPIDR-209ENST00000519141 GLI2P10070 1586 aa18.5■□□□□ 0.55
SPIDR-209ENST00000519141 WDR7Q9Y4E6 1490 aa18.5■□□□□ 0.55
SPIDR-209ENST00000519141 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
SPIDR-209ENST00000519141 PTPRKQ15262 1439 aa18.48■□□□□ 0.55
SPIDR-209ENST00000519141 SETD5Q9C0A6 1442 aa18.48■□□□□ 0.55
SPIDR-209ENST00000519141 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
SPIDR-209ENST00000519141 KCNH8Q96L42 1107 aa18.46■□□□□ 0.55
SPIDR-209ENST00000519141 ZNF644Q9H582 1327 aaPredicted RBP18.46■□□□□ 0.55
SPIDR-209ENST00000519141 DAPK1P53355 1430 aa18.46■□□□□ 0.55
SPIDR-209ENST00000519141 RAB3GAP2Q9H2M9 1393 aa18.45■□□□□ 0.54
SPIDR-209ENST00000519141 ZNF777Q9ULD5 760 aaPredicted RBP18.44■□□□□ 0.54
SPIDR-209ENST00000519141 CROCC2H7BZ55 1655 aa18.44■□□□□ 0.54
SPIDR-209ENST00000519141 ARHGAP5Q13017 1502 aa18.44■□□□□ 0.54
SPIDR-209ENST00000519141 HFM1A2PYH4 1435 aa18.44■□□□□ 0.54
SPIDR-209ENST00000519141 PPRC1Q5VV67 1664 aaKnown RBP18.43■□□□□ 0.54
SPIDR-209ENST00000519141 GCC2Q8IWJ2 1684 aa18.43■□□□□ 0.54
SPIDR-209ENST00000519141 AKNAQ7Z591 1439 aa18.42■□□□□ 0.54
SPIDR-209ENST00000519141 SAMD9LQ8IVG5 1584 aa18.42■□□□□ 0.54
SPIDR-209ENST00000519141 ABCC5O15440 1437 aa18.42■□□□□ 0.54
SPIDR-209ENST00000519141 ADGBQ8N7X0 1667 aa18.41■□□□□ 0.54
SPIDR-209ENST00000519141 KDM6BO15054 1643 aa18.41■□□□□ 0.54
SPIDR-209ENST00000519141 ABCA9Q8IUA7 1624 aa18.41■□□□□ 0.54
SPIDR-209ENST00000519141 MAP3K4Q9Y6R4 1608 aa18.41■□□□□ 0.54
SPIDR-209ENST00000519141 NAIPQ13075 1403 aa18.39■□□□□ 0.53
SPIDR-209ENST00000519141 ARHGEF5Q12774 1597 aa18.39■□□□□ 0.53
SPIDR-209ENST00000519141 ARAP3Q8WWN8 1544 aa18.39■□□□□ 0.53
SPIDR-209ENST00000519141 PLCH2O75038 1416 aa18.38■□□□□ 0.53
SPIDR-209ENST00000519141 CHIC2Q9UKJ5 165 aa18.38■□□□□ 0.53
SPIDR-209ENST00000519141 ROCK1Q13464 1354 aa18.37■□□□□ 0.53
SPIDR-209ENST00000519141 DHX57Q6P158 1386 aaKnown RBP18.37■□□□□ 0.53
SPIDR-209ENST00000519141 PLEKHH2Q8IVE3 1493 aa18.36■□□□□ 0.53
SPIDR-209ENST00000519141 SHANK2Q9UPX8 1470 aa18.36■□□□□ 0.53
SPIDR-209ENST00000519141 SYCP2Q9BX26 1530 aa18.34■□□□□ 0.53
SPIDR-209ENST00000519141 ADGRL2O95490 1459 aa18.33■□□□□ 0.53
SPIDR-209ENST00000519141 TEX14Q8IWB6 1497 aa18.33■□□□□ 0.53
SPIDR-209ENST00000519141 RRP7BPQ9NSQ0 103 aa18.33■□□□□ 0.52
SPIDR-209ENST00000519141 CD109Q6YHK3 1445 aa18.33■□□□□ 0.52
SPIDR-209ENST00000519141 CCDC141Q6ZP82 1450 aa18.32■□□□□ 0.52
SPIDR-209ENST00000519141 MBD5Q9P267 1494 aa18.32■□□□□ 0.52
SPIDR-209ENST00000519141 COL17A1Q9UMD9 1497 aaPredicted RBP18.32■□□□□ 0.52
SPIDR-209ENST00000519141 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
SPIDR-209ENST00000519141 KIAA1107Q9UPP5 1409 aa18.31■□□□□ 0.52
SPIDR-209ENST00000519141 C9orf84Q5VXU9 1444 aa18.31■□□□□ 0.52
SPIDR-209ENST00000519141 ABCC1P33527 1531 aa18.3■□□□□ 0.52
SPIDR-209ENST00000519141 CLSPNQ9HAW4 1339 aa18.3■□□□□ 0.52
SPIDR-209ENST00000519141 HNRNPMP52272 730 aaKnown RBP eCLIP18.28■□□□□ 0.52
SPIDR-209ENST00000519141 RSPH4AQ5TD94 716 aa18.28■□□□□ 0.52
SPIDR-209ENST00000519141 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
SPIDR-209ENST00000519141 NCOA1Q15788 1441 aa18.27■□□□□ 0.52
SPIDR-209ENST00000519141 FANCAO15360 1455 aa18.27■□□□□ 0.52
SPIDR-209ENST00000519141 MAST1Q9Y2H9 1570 aa18.27■□□□□ 0.52
SPIDR-209ENST00000519141 TSPY4P0CV99 314 aa18.26■□□□□ 0.51
SPIDR-209ENST00000519141 TSPY10P0CW01 314 aa18.26■□□□□ 0.51
SPIDR-209ENST00000519141 AEBP2Q6ZN18 517 aaPredicted RBP18.25■□□□□ 0.51
SPIDR-209ENST00000519141 CFAP74Q9C0B2 1584 aa18.25■□□□□ 0.51
SPIDR-209ENST00000519141 ARHGEF12Q9NZN5 1544 aa18.25■□□□□ 0.51
SPIDR-209ENST00000519141 ACIN1Q9UKV3 1341 aaKnown RBP18.22■□□□□ 0.51
SPIDR-209ENST00000519141 PLXNC1O60486 1568 aa18.2■□□□□ 0.5
SPIDR-209ENST00000519141 ADGRL1O94910 1474 aa18.2■□□□□ 0.5
SPIDR-209ENST00000519141 KIF15Q9NS87 1388 aa18.18■□□□□ 0.5
SPIDR-209ENST00000519141 ANKRD50Q9ULJ7 1429 aa18.18■□□□□ 0.5
SPIDR-209ENST00000519141 TRAPPC8Q9Y2L5 1435 aa18.18■□□□□ 0.5
SPIDR-209ENST00000519141 KDM4FA0A1W2PPD8 638 aa18.16■□□□□ 0.5
SPIDR-209ENST00000519141 TRIM52Q96A61 297 aa18.15■□□□□ 0.5
SPIDR-209ENST00000519141 SCAPERQ9BY12 1400 aa18.15■□□□□ 0.5
SPIDR-209ENST00000519141 NEO1Q92859 1461 aa18.13■□□□□ 0.49
SPIDR-209ENST00000519141 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
SPIDR-209ENST00000519141 INO80Q9ULG1 1556 aaPredicted RBP18.12■□□□□ 0.49
SPIDR-209ENST00000519141 RTEL1-TNFRSF6BF6WH68 1400 aa18.12■□□□□ 0.49
SPIDR-209ENST00000519141 SPAG9O60271 1321 aaKnown RBP18.11■□□□□ 0.49
SPIDR-209ENST00000519141 ATP7AQ04656 1500 aa18.11■□□□□ 0.49
SPIDR-209ENST00000519141 DUOX2Q9NRD8 1548 aa18.11■□□□□ 0.49
SPIDR-209ENST00000519141 ZNF518AQ6AHZ1 1483 aa18.09■□□□□ 0.49
SPIDR-209ENST00000519141 AFAP1Q8N556 730 aa18.09■□□□□ 0.49
SPIDR-209ENST00000519141 POGZQ7Z3K3 1410 aa18.08■□□□□ 0.48
SPIDR-209ENST00000519141 RAPGEF3O95398 923 aa18.07■□□□□ 0.48
SPIDR-209ENST00000519141 KDM5DQ9BY66 1539 aa18.07■□□□□ 0.48
SPIDR-209ENST00000519141 MPHOSPH9Q99550 1183 aa18.06■□□□□ 0.48
SPIDR-209ENST00000519141 ERBINQ96RT1 1412 aa18.06■□□□□ 0.48
SPIDR-209ENST00000519141 DENND4BO75064 1496 aaPredicted RBP18.06■□□□□ 0.48
SPIDR-209ENST00000519141 PZPP20742 1482 aa18.06■□□□□ 0.48
SPIDR-209ENST00000519141 KDM5CP41229 1560 aa18.06■□□□□ 0.48
SPIDR-209ENST00000519141 UNC13BO14795 1591 aa18.05■□□□□ 0.48
SPIDR-209ENST00000519141 KIDINS220Q9ULH0 1771 aa18.03■□□□□ 0.48
SPIDR-209ENST00000519141 HECW2Q9P2P5 1572 aa18.03■□□□□ 0.48
SPIDR-209ENST00000519141 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
SPIDR-209ENST00000519141 NUP155O75694 1391 aa18.01■□□□□ 0.47
SPIDR-209ENST00000519141 MYT1LQ9UL68 1186 aa18.01■□□□□ 0.47
SPIDR-209ENST00000519141 RICTORQ6R327 1708 aa18.01■□□□□ 0.47
SPIDR-209ENST00000519141 FRMPD1Q5SYB0 1578 aa18.01■□□□□ 0.47
SPIDR-209ENST00000519141 SIN3AQ96ST3 1273 aa18■□□□□ 0.47
SPIDR-209ENST00000519141 MLH3Q9UHC1 1453 aa17.99■□□□□ 0.47
SPIDR-209ENST00000519141 NEUROD1Q13562 356 aa17.99■□□□□ 0.47
SPIDR-209ENST00000519141 EIF2AK4Q9P2K8 1649 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms