RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 PREX2Q70Z35 1606 aa11.99□□□□□ -0.49
SDCBP-206ENST00000519115 TIAM1Q13009 1591 aa11.98□□□□□ -0.49
SDCBP-206ENST00000519115 EHBP1L1Q8N3D4 1523 aa11.98□□□□□ -0.49
SDCBP-206ENST00000519115 ARAP3Q8WWN8 1544 aa11.98□□□□□ -0.49
SDCBP-206ENST00000519115 MTUS2Q5JR59 1369 aa11.98□□□□□ -0.49
SDCBP-206ENST00000519115 FRMPD1Q5SYB0 1578 aa11.97□□□□□ -0.49
SDCBP-206ENST00000519115 ARHGAP5Q13017 1502 aa11.97□□□□□ -0.49
SDCBP-206ENST00000519115 PLCH2O75038 1416 aa11.97□□□□□ -0.49
SDCBP-206ENST00000519115 RICTORQ6R327 1708 aa11.97□□□□□ -0.49
SDCBP-206ENST00000519115 AKNAQ7Z591 1439 aa11.95□□□□□ -0.5
SDCBP-206ENST00000519115 PHLDB1Q86UU1 1377 aa11.94□□□□□ -0.5
SDCBP-206ENST00000519115 ADGRL1O94910 1474 aa11.94□□□□□ -0.5
SDCBP-206ENST00000519115 SUPT6HQ7KZ85 1726 aaKnown RBP11.94□□□□□ -0.5
SDCBP-206ENST00000519115 RAPGEF3O95398 923 aa11.93□□□□□ -0.5
SDCBP-206ENST00000519115 ITSN2Q9NZM3 1697 aa11.92□□□□□ -0.5
SDCBP-206ENST00000519115 DENND4BO75064 1496 aaPredicted RBP11.92□□□□□ -0.5
SDCBP-206ENST00000519115 EFCAB2Q5VUJ9 269 aa11.91□□□□□ -0.5
SDCBP-206ENST00000519115 SCAPERQ9BY12 1400 aa11.91□□□□□ -0.5
SDCBP-206ENST00000519115 ABCC1P33527 1531 aa11.91□□□□□ -0.5
SDCBP-206ENST00000519115 LRRC9Q6ZRR7 1453 aa11.9□□□□□ -0.5
SDCBP-206ENST00000519115 SAMD9LQ8IVG5 1584 aa11.9□□□□□ -0.5
SDCBP-206ENST00000519115 MAP3K1Q13233 1512 aa11.9□□□□□ -0.5
SDCBP-206ENST00000519115 GPATCH8Q9UKJ3 1502 aaKnown RBP11.9□□□□□ -0.5
SDCBP-206ENST00000519115 CCNB3Q8WWL7 1395 aa11.9□□□□□ -0.5
SDCBP-206ENST00000519115 NCOA2Q15596 1464 aa11.89□□□□□ -0.51
SDCBP-206ENST00000519115 POGZQ7Z3K3 1410 aa11.89□□□□□ -0.51
SDCBP-206ENST00000519115 ZMYM4Q5VZL5 1548 aa11.89□□□□□ -0.51
SDCBP-206ENST00000519115 ARHGEF40Q8TER5 1519 aa11.89□□□□□ -0.51
SDCBP-206ENST00000519115 SYCP2Q9BX26 1530 aa11.87□□□□□ -0.51
SDCBP-206ENST00000519115 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
SDCBP-206ENST00000519115 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
SDCBP-206ENST00000519115 ARHGEF12Q9NZN5 1544 aa11.86□□□□□ -0.51
SDCBP-206ENST00000519115 ZFYVE16Q7Z3T8 1539 aa11.86□□□□□ -0.51
SDCBP-206ENST00000519115 KDM5CP41229 1560 aa11.85□□□□□ -0.51
SDCBP-206ENST00000519115 ZNF518AQ6AHZ1 1483 aa11.85□□□□□ -0.51
SDCBP-206ENST00000519115 APLP2Q06481 763 aa11.85□□□□□ -0.51
SDCBP-206ENST00000519115 YEATS2Q9ULM3 1422 aa11.85□□□□□ -0.51
SDCBP-206ENST00000519115 HECW2Q9P2P5 1572 aa11.84□□□□□ -0.51
SDCBP-206ENST00000519115 CFDP1Q9UEE9 299 aaPredicted RBP11.84□□□□□ -0.51
SDCBP-206ENST00000519115 TRAPPC8Q9Y2L5 1435 aa11.84□□□□□ -0.51
SDCBP-206ENST00000519115 SIGLEC1Q9BZZ2 1709 aa11.83□□□□□ -0.52
SDCBP-206ENST00000519115 AFAP1Q8N556 730 aa11.82□□□□□ -0.52
SDCBP-206ENST00000519115 ABCA6Q8N139 1617 aa11.82□□□□□ -0.52
SDCBP-206ENST00000519115 KIDINS220Q9ULH0 1771 aa11.81□□□□□ -0.52
SDCBP-206ENST00000519115 CAMSAP2Q08AD1 1489 aa11.81□□□□□ -0.52
SDCBP-206ENST00000519115 MAGI2Q86UL8 1455 aa11.81□□□□□ -0.52
SDCBP-206ENST00000519115 PLEKHH2Q8IVE3 1493 aa11.81□□□□□ -0.52
SDCBP-206ENST00000519115 ZNF644Q9H582 1327 aaPredicted RBP11.81□□□□□ -0.52
SDCBP-206ENST00000519115 DIP2CQ9Y2E4 1556 aa11.8□□□□□ -0.52
SDCBP-206ENST00000519115 KDM4FA0A1W2PPD8 638 aa11.79□□□□□ -0.52
SDCBP-206ENST00000519115 HNRNPMP52272 730 aaKnown RBP eCLIP11.79□□□□□ -0.52
SDCBP-206ENST00000519115 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
SDCBP-206ENST00000519115 BCORL1Q5H9F3 1711 aa11.79□□□□□ -0.52
SDCBP-206ENST00000519115 MYOM3Q5VTT5 1437 aa11.78□□□□□ -0.52
SDCBP-206ENST00000519115 KIAA1107Q9UPP5 1409 aa11.78□□□□□ -0.52
SDCBP-206ENST00000519115 INO80Q9ULG1 1556 aaPredicted RBP11.78□□□□□ -0.52
SDCBP-206ENST00000519115 MLH3Q9UHC1 1453 aa11.77□□□□□ -0.52
SDCBP-206ENST00000519115 ATP7AQ04656 1500 aa11.77□□□□□ -0.52
SDCBP-206ENST00000519115 SOCS7O14512 581 aa11.77□□□□□ -0.53
SDCBP-206ENST00000519115 ARID4BQ4LE39 1312 aaPredicted RBP11.77□□□□□ -0.53
SDCBP-206ENST00000519115 C9orf84Q5VXU9 1444 aa11.77□□□□□ -0.53
SDCBP-206ENST00000519115 ATP10AO60312 1499 aa11.76□□□□□ -0.53
SDCBP-206ENST00000519115 MBD5Q9P267 1494 aa11.76□□□□□ -0.53
SDCBP-206ENST00000519115 ADAMTSL3P82987 1691 aa11.76□□□□□ -0.53
SDCBP-206ENST00000519115 MADDQ8WXG6 1647 aa11.75□□□□□ -0.53
SDCBP-206ENST00000519115 PTPN23Q9H3S7 1636 aa11.75□□□□□ -0.53
SDCBP-206ENST00000519115 ARHGEF5Q12774 1597 aa11.75□□□□□ -0.53
SDCBP-206ENST00000519115 SPAG9O60271 1321 aaKnown RBP11.74□□□□□ -0.53
SDCBP-206ENST00000519115 CCDC141Q6ZP82 1450 aa11.74□□□□□ -0.53
SDCBP-206ENST00000519115 RIMS1Q86UR5 1692 aaKnown RBP11.74□□□□□ -0.53
SDCBP-206ENST00000519115 ADGBQ8N7X0 1667 aa11.74□□□□□ -0.53
SDCBP-206ENST00000519115 FER1L4A9Z1Z3 1794 aa11.74□□□□□ -0.53
SDCBP-206ENST00000519115 PPARGC1BQ86YN6 1023 aaKnown RBP11.73□□□□□ -0.53
SDCBP-206ENST00000519115 MIA2Q96PC5 1412 aa11.73□□□□□ -0.53
SDCBP-206ENST00000519115 REREQ9P2R6 1566 aa11.73□□□□□ -0.53
SDCBP-206ENST00000519115 CROCC2H7BZ55 1655 aa11.72□□□□□ -0.53
SDCBP-206ENST00000519115 FGD6Q6ZV73 1430 aa11.72□□□□□ -0.53
SDCBP-206ENST00000519115 MLECQ14165 292 aa11.71□□□□□ -0.53
SDCBP-206ENST00000519115 DNMT1P26358 1616 aaKnown RBP11.69□□□□□ -0.54
SDCBP-206ENST00000519115 PLXNC1O60486 1568 aa11.69□□□□□ -0.54
SDCBP-206ENST00000519115 TCOF1Q13428 1488 aaKnown RBP11.69□□□□□ -0.54
SDCBP-206ENST00000519115 MAST1Q9Y2H9 1570 aa11.68□□□□□ -0.54
SDCBP-206ENST00000519115 AGLP35573 1532 aa11.68□□□□□ -0.54
SDCBP-206ENST00000519115 A2MP01023 1474 aa11.68□□□□□ -0.54
SDCBP-206ENST00000519115 RTEL1-TNFRSF6BF6WH68 1400 aa11.68□□□□□ -0.54
SDCBP-206ENST00000519115 PTPRMP28827 1452 aa11.67□□□□□ -0.54
SDCBP-206ENST00000519115 LMTK3Q96Q04 1460 aa11.65□□□□□ -0.54
SDCBP-206ENST00000519115 ABCC5O15440 1437 aa11.65□□□□□ -0.54
SDCBP-206ENST00000519115 DAPK1P53355 1430 aa11.65□□□□□ -0.54
SDCBP-206ENST00000519115 TSPY4P0CV99 314 aa11.64□□□□□ -0.55
SDCBP-206ENST00000519115 TSPY10P0CW01 314 aa11.64□□□□□ -0.55
SDCBP-206ENST00000519115 FAM50AQ14320 339 aaKnown RBP11.64□□□□□ -0.55
SDCBP-206ENST00000519115 RSPH4AQ5TD94 716 aa11.64□□□□□ -0.55
SDCBP-206ENST00000519115 SHANK2Q9UPX8 1470 aa11.63□□□□□ -0.55
SDCBP-206ENST00000519115 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
SDCBP-206ENST00000519115 C3P01024 1663 aa11.62□□□□□ -0.55
SDCBP-206ENST00000519115 DHX29Q7Z478 1369 aaKnown RBP11.61□□□□□ -0.55
SDCBP-206ENST00000519115 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
SDCBP-206ENST00000519115 MROH2AA6NES4 1674 aa11.59□□□□□ -0.55
SDCBP-206ENST00000519115 CHIC2Q9UKJ5 165 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms