RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 CDC42BPBQ9Y5S2 1711 aa22.62■■□□□ 1.21
BRD9-217ENST00000519112 SIGLEC1Q9BZZ2 1709 aa22.62■■□□□ 1.21
BRD9-217ENST00000519112 POGZQ7Z3K3 1410 aa22.6■■□□□ 1.21
BRD9-217ENST00000519112 YEATS2Q9ULM3 1422 aa22.6■■□□□ 1.21
BRD9-217ENST00000519112 EFCAB2Q5VUJ9 269 aa22.6■■□□□ 1.21
BRD9-217ENST00000519112 ARHGAP5Q13017 1502 aa22.58■■□□□ 1.21
BRD9-217ENST00000519112 ZFYVE16Q7Z3T8 1539 aa22.58■■□□□ 1.21
BRD9-217ENST00000519112 HECW2Q9P2P5 1572 aa22.56■■□□□ 1.2
BRD9-217ENST00000519112 MAGI2Q86UL8 1455 aa22.56■■□□□ 1.2
BRD9-217ENST00000519112 PREX2Q70Z35 1606 aa22.56■■□□□ 1.2
BRD9-217ENST00000519112 ARID4BQ4LE39 1312 aaPredicted RBP22.56■■□□□ 1.2
BRD9-217ENST00000519112 MADDQ8WXG6 1647 aa22.55■■□□□ 1.2
BRD9-217ENST00000519112 PTPRMP28827 1452 aa22.54■■□□□ 1.2
BRD9-217ENST00000519112 CDC42BPAQ5VT25 1732 aa22.54■■□□□ 1.2
BRD9-217ENST00000519112 CEP162Q5TB80 1403 aa22.5■■□□□ 1.19
BRD9-217ENST00000519112 AFAP1Q8N556 730 aa22.5■■□□□ 1.19
BRD9-217ENST00000519112 KDM5CP41229 1560 aa22.5■■□□□ 1.19
BRD9-217ENST00000519112 ARHGEF12Q9NZN5 1544 aa22.49■■□□□ 1.19
BRD9-217ENST00000519112 ZNF518AQ6AHZ1 1483 aa22.48■■□□□ 1.19
BRD9-217ENST00000519112 RIMS1Q86UR5 1692 aaKnown RBP22.48■■□□□ 1.19
BRD9-217ENST00000519112 ABCC1P33527 1531 aa22.47■■□□□ 1.19
BRD9-217ENST00000519112 ATP10AO60312 1499 aa22.46■■□□□ 1.19
BRD9-217ENST00000519112 ITSN2Q9NZM3 1697 aa22.46■■□□□ 1.19
BRD9-217ENST00000519112 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
BRD9-217ENST00000519112 GPATCH8Q9UKJ3 1502 aaKnown RBP22.44■■□□□ 1.18
BRD9-217ENST00000519112 TRAPPC8Q9Y2L5 1435 aa22.44■■□□□ 1.18
BRD9-217ENST00000519112 C9orf84Q5VXU9 1444 aa22.42■■□□□ 1.18
BRD9-217ENST00000519112 SAMD9LQ8IVG5 1584 aa22.42■■□□□ 1.18
BRD9-217ENST00000519112 DIP2CQ9Y2E4 1556 aa22.41■■□□□ 1.18
BRD9-217ENST00000519112 MLECQ14165 292 aa22.4■■□□□ 1.18
BRD9-217ENST00000519112 MLH3Q9UHC1 1453 aa22.4■■□□□ 1.18
BRD9-217ENST00000519112 ABCA6Q8N139 1617 aa22.39■■□□□ 1.18
BRD9-217ENST00000519112 FER1L4A9Z1Z3 1794 aa22.39■■□□□ 1.17
BRD9-217ENST00000519112 KIDINS220Q9ULH0 1771 aa22.37■■□□□ 1.17
BRD9-217ENST00000519112 MTUS2Q5JR59 1369 aa22.37■■□□□ 1.17
BRD9-217ENST00000519112 ZNF777Q9ULD5 760 aaPredicted RBP22.36■■□□□ 1.17
BRD9-217ENST00000519112 SYCP2Q9BX26 1530 aa22.34■■□□□ 1.17
BRD9-217ENST00000519112 REREQ9P2R6 1566 aa22.33■■□□□ 1.17
BRD9-217ENST00000519112 EHBP1L1Q8N3D4 1523 aa22.33■■□□□ 1.17
BRD9-217ENST00000519112 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.17
BRD9-217ENST00000519112 CCNB3Q8WWL7 1395 aa22.33■■□□□ 1.17
BRD9-217ENST00000519112 TIAM1Q13009 1591 aa22.32■■□□□ 1.16
BRD9-217ENST00000519112 LMTK3Q96Q04 1460 aa22.31■■□□□ 1.16
BRD9-217ENST00000519112 HNRNPMP52272 730 aaKnown RBP eCLIP22.31■■□□□ 1.166e-7■■■■□ 22.1
BRD9-217ENST00000519112 PLPPR3Q6T4P5 718 aa22.31■■□□□ 1.16
BRD9-217ENST00000519112 CFDP1Q9UEE9 299 aaPredicted RBP22.31■■□□□ 1.16
BRD9-217ENST00000519112 KIAA1107Q9UPP5 1409 aa22.28■■□□□ 1.16
BRD9-217ENST00000519112 AGLP35573 1532 aa22.26■■□□□ 1.15
BRD9-217ENST00000519112 ZNF644Q9H582 1327 aaPredicted RBP22.26■■□□□ 1.15
BRD9-217ENST00000519112 VPS8Q8N3P4 1428 aa22.25■■□□□ 1.15
BRD9-217ENST00000519112 PLEKHH2Q8IVE3 1493 aa22.24■■□□□ 1.15
BRD9-217ENST00000519112 CEBPAP49715 358 aaPredicted RBP22.23■■□□□ 1.15
BRD9-217ENST00000519112 INO80Q9ULG1 1556 aaPredicted RBP22.23■■□□□ 1.15
BRD9-217ENST00000519112 SUPT6HQ7KZ85 1726 aaKnown RBP22.23■■□□□ 1.15
BRD9-217ENST00000519112 SPAG9O60271 1321 aaKnown RBP22.22■■□□□ 1.15
BRD9-217ENST00000519112 NCOA2Q15596 1464 aa22.22■■□□□ 1.15
BRD9-217ENST00000519112 ATP7AQ04656 1500 aa22.21■■□□□ 1.15
BRD9-217ENST00000519112 MBD5Q9P267 1494 aa22.21■■□□□ 1.15
BRD9-217ENST00000519112 HSPA2P54652 639 aa22.19■■□□□ 1.14
BRD9-217ENST00000519112 C3P01024 1663 aa22.17■■□□□ 1.14
BRD9-217ENST00000519112 LRRC9Q6ZRR7 1453 aa22.16■■□□□ 1.14
BRD9-217ENST00000519112 PLXNC1O60486 1568 aa22.16■■□□□ 1.14
BRD9-217ENST00000519112 PREX1Q8TCU6 1659 aa22.15■■□□□ 1.14
BRD9-217ENST00000519112 KANK4Q5T7N3 995 aaPredicted RBP22.13■■□□□ 1.13
BRD9-217ENST00000519112 ILDR1Q86SU0 546 aaPredicted RBP22.13■■□□□ 1.13
BRD9-217ENST00000519112 SETD1BQ9UPS6 1966 aaKnown RBP22.12■■□□□ 1.13
BRD9-217ENST00000519112 A2MP01023 1474 aa22.12■■□□□ 1.13
BRD9-217ENST00000519112 CAMSAP2Q08AD1 1489 aa22.12■■□□□ 1.13
BRD9-217ENST00000519112 MAP3K1Q13233 1512 aa22.11■■□□□ 1.13
BRD9-217ENST00000519112 ADGBQ8N7X0 1667 aa22.11■■□□□ 1.13
BRD9-217ENST00000519112 RTEL1-TNFRSF6BF6WH68 1400 aa22.07■■□□□ 1.12
BRD9-217ENST00000519112 ESF1Q9H501 851 aaKnown RBP22.06■■□□□ 1.12
BRD9-217ENST00000519112 CCDC141Q6ZP82 1450 aa22.06■■□□□ 1.12
BRD9-217ENST00000519112 MROH2AA6NES4 1674 aa22.06■■□□□ 1.12
BRD9-217ENST00000519112 CNTLNQ9NXG0 1405 aa22.06■■□□□ 1.12
BRD9-217ENST00000519112 CLTCQ00610 1675 aaKnown RBP22.05■■□□□ 1.12
BRD9-217ENST00000519112 ARHGEF5Q12774 1597 aa22.04■■□□□ 1.12
BRD9-217ENST00000519112 STRCQ7RTU9 1775 aa22.02■■□□□ 1.12
BRD9-217ENST00000519112 ZMYM3Q14202 1370 aa22.02■■□□□ 1.12
BRD9-217ENST00000519112 UHRF1BP1Q6BDS2 1440 aa22.02■■□□□ 1.12
BRD9-217ENST00000519112 RSPH4AQ5TD94 716 aa22.01■■□□□ 1.11
BRD9-217ENST00000519112 GGT6Q6P531 493 aa22.01■■□□□ 1.11
BRD9-217ENST00000519112 DHX29Q7Z478 1369 aaKnown RBP22■■□□□ 1.11
BRD9-217ENST00000519112 MYOM3Q5VTT5 1437 aa21.98■■□□□ 1.11
BRD9-217ENST00000519112 MIA2Q96PC5 1412 aa21.96■■□□□ 1.11
BRD9-217ENST00000519112 NPATQ14207 1427 aa21.95■■□□□ 1.1
BRD9-217ENST00000519112 MAST1Q9Y2H9 1570 aa21.93■■□□□ 1.1
BRD9-217ENST00000519112 PTPRKQ15262 1439 aa21.92■■□□□ 1.1
BRD9-217ENST00000519112 KIF3BO15066 747 aa21.92■■□□□ 1.1
BRD9-217ENST00000519112 TSPY4P0CV99 314 aa21.92■■□□□ 1.1
BRD9-217ENST00000519112 TSPY10P0CW01 314 aa21.92■■□□□ 1.1
BRD9-217ENST00000519112 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
BRD9-217ENST00000519112 APLP2Q06481 763 aa21.89■■□□□ 1.09
BRD9-217ENST00000519112 MYO3AQ8NEV4 1616 aa21.88■■□□□ 1.09
BRD9-217ENST00000519112 FBXO41Q8TF61 875 aa21.87■■□□□ 1.09
BRD9-217ENST00000519112 PTPN23Q9H3S7 1636 aa21.87■■□□□ 1.09
BRD9-217ENST00000519112 ZNF142P52746 1687 aaPredicted RBP21.85■■□□□ 1.09
BRD9-217ENST00000519112 KDM5DQ9BY66 1539 aa21.85■■□□□ 1.09
BRD9-217ENST00000519112 CAMSAP1Q5T5Y3 1602 aa21.84■■□□□ 1.09
BRD9-217ENST00000519112 NCOA1Q15788 1441 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms