RNA–Protein interactions for RNA: ENST00000518960.5

MSR1-209, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 3

Gene MSR1, Length 353 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-209ENST00000518960 TMEM121BQ9BXQ6 578 aaPredicted RBP5.37□□□□□ -1.55
MSR1-209ENST00000518960 MICALL2Q8IY33 904 aa5.35□□□□□ -1.55
MSR1-209ENST00000518960 ZCCHC6Q5VYS8 1495 aaKnown RBP5.34□□□□□ -1.55
MSR1-209ENST00000518960 GTPBP6O43824 516 aaPredicted RBP5.34□□□□□ -1.55
MSR1-209ENST00000518960 NKX1-1Q15270 411 aaPredicted RBP5.34□□□□□ -1.55
MSR1-209ENST00000518960 PPP1R37O75864 691 aa5.32□□□□□ -1.56
MSR1-209ENST00000518960 TMC2Q8TDI7 906 aa5.32□□□□□ -1.56
MSR1-209ENST00000518960 PDE4AP27815 886 aa5.31□□□□□ -1.56
MSR1-209ENST00000518960 PAXIP1Q6ZW49 1069 aaPredicted RBP5.31□□□□□ -1.56
MSR1-209ENST00000518960 CFAP44Q96MT7 982 aa5.31□□□□□ -1.56
MSR1-209ENST00000518960 CDAN1Q8IWY9 1227 aa5.3□□□□□ -1.56
MSR1-209ENST00000518960 RIMBP2O15034 1052 aa5.29□□□□□ -1.56
MSR1-209ENST00000518960 DOK7Q18PE1 504 aa5.28□□□□□ -1.56
MSR1-209ENST00000518960 ZNF710Q8N1W2 664 aa5.28□□□□□ -1.56
MSR1-209ENST00000518960 PCDH10Q9P2E7 1040 aa5.28□□□□□ -1.56
MSR1-209ENST00000518960 ST18O60284 1047 aa5.27□□□□□ -1.57
MSR1-209ENST00000518960 GPHNQ9NQX3 736 aaPredicted RBP5.27□□□□□ -1.57
MSR1-209ENST00000518960 C2orf72A6NCS6 295 aa5.26□□□□□ -1.57
MSR1-209ENST00000518960 NACADO15069 1562 aa5.25□□□□□ -1.57
MSR1-209ENST00000518960 RB1CC1Q8TDY2 1594 aa5.25□□□□□ -1.57
MSR1-209ENST00000518960 TBC1D12O60347 775 aa5.25□□□□□ -1.57
MSR1-209ENST00000518960 DCAF1Q9Y4B6 1507 aa5.24□□□□□ -1.57
MSR1-209ENST00000518960 KIF3CO14782 793 aa5.24□□□□□ -1.57
MSR1-209ENST00000518960 TMEM92Q6UXU6 159 aa5.24□□□□□ -1.57
MSR1-209ENST00000518960 ZSWIM6Q9HCJ5 1215 aa5.24□□□□□ -1.57
MSR1-209ENST00000518960 FOXK1P85037 733 aa5.23□□□□□ -1.57
MSR1-209ENST00000518960 MARVELD3Q96A59 401 aa5.23□□□□□ -1.57
MSR1-209ENST00000518960 LARP6Q9BRS8 491 aaKnown RBP5.23□□□□□ -1.57
MSR1-209ENST00000518960 WDR70Q9NW82 654 aa5.23□□□□□ -1.57
MSR1-209ENST00000518960 PLPP6Q8IY26 295 aa5.22□□□□□ -1.57
MSR1-209ENST00000518960 SLC34A2O95436 690 aa5.21□□□□□ -1.58
MSR1-209ENST00000518960 CRISPLD2Q9H0B8 497 aa5.21□□□□□ -1.58
MSR1-209ENST00000518960 SCRIBQ14160 1630 aa5.21□□□□□ -1.58
MSR1-209ENST00000518960 MYO15BQ96JP2 1530 aa5.21□□□□□ -1.58
MSR1-209ENST00000518960 HOXB1P14653 301 aaPredicted RBP5.2□□□□□ -1.58
MSR1-209ENST00000518960 DDX27Q96GQ7 796 aaKnown RBP5.2□□□□□ -1.58
MSR1-209ENST00000518960 SHROOM4Q9ULL8 1493 aa5.2□□□□□ -1.58
MSR1-209ENST00000518960 HOXB3P14651 431 aaPredicted RBP5.19□□□□□ -1.58
MSR1-209ENST00000518960 PLCB2Q00722 1185 aa5.19□□□□□ -1.58
MSR1-209ENST00000518960 DSG2Q14126 1118 aa5.19□□□□□ -1.58
MSR1-209ENST00000518960 PPP1R15BQ5SWA1 713 aa5.19□□□□□ -1.58
MSR1-209ENST00000518960 MMRN1Q13201 1228 aa5.18□□□□□ -1.58
MSR1-209ENST00000518960 PTCD2Q8WV60 388 aaKnown RBP5.18□□□□□ -1.58
MSR1-209ENST00000518960 NCKAP5LQ9HCH0 1330 aa5.18□□□□□ -1.58
MSR1-209ENST00000518960 EMP3P54852 163 aa5.17□□□□□ -1.58
MSR1-209ENST00000518960 ARSIQ5FYB1 569 aa5.17□□□□□ -1.58
MSR1-209ENST00000518960 GPR153Q6NV75 609 aa5.17□□□□□ -1.58
MSR1-209ENST00000518960 SPNS2Q8IVW8 549 aa5.17□□□□□ -1.58
MSR1-209ENST00000518960 MAP3K9P80192 1104 aa5.16□□□□□ -1.58
MSR1-209ENST00000518960 MFSD10Q14728 455 aa5.16□□□□□ -1.58
MSR1-209ENST00000518960 CADPS2Q86UW7 1296 aa5.16□□□□□ -1.58
MSR1-209ENST00000518960 PCDHGA4Q9Y5G9 962 aa5.16□□□□□ -1.58
MSR1-209ENST00000518960 UNC13AQ9UPW8 1703 aa5.16□□□□□ -1.58
MSR1-209ENST00000518960 ERBB3P21860 1342 aa5.16□□□□□ -1.58
MSR1-209ENST00000518960 PSDA5PKW4 1024 aaPredicted RBP5.15□□□□□ -1.59
MSR1-209ENST00000518960 ZNF316A6NFI3 1004 aaPredicted RBP5.15□□□□□ -1.59
MSR1-209ENST00000518960 TSHZ2Q9NRE2 1034 aa5.15□□□□□ -1.59
MSR1-209ENST00000518960 POTEB3A0JP26 581 aa5.14□□□□□ -1.59
MSR1-209ENST00000518960 FAM205CA6NFA0 338 aa5.14□□□□□ -1.59
MSR1-209ENST00000518960 E2F4Q16254 413 aa5.14□□□□□ -1.59
MSR1-209ENST00000518960 POTEBQ6S5H4 581 aa5.14□□□□□ -1.59
MSR1-209ENST00000518960 HAP1P54257 671 aaPredicted RBP5.13□□□□□ -1.59
MSR1-209ENST00000518960 OXER1Q8TDS5 423 aa5.13□□□□□ -1.59
MSR1-209ENST00000518960 NUDT7P0C024 238 aa5.12□□□□□ -1.59
MSR1-209ENST00000518960 UPF1Q92900 1129 aaKnown RBP eCLIP5.12□□□□□ -1.59
MSR1-209ENST00000518960 CAMK2BQ13554 666 aa5.11□□□□□ -1.59
MSR1-209ENST00000518960 HS3ST6Q96QI5 342 aa5.11□□□□□ -1.59
MSR1-209ENST00000518960 VARS2Q5ST30 1063 aaKnown RBP5.1□□□□□ -1.59
MSR1-209ENST00000518960 ZNF687Q8N1G0 1237 aa5.1□□□□□ -1.59
MSR1-209ENST00000518960 KHSRPQ92945 711 aaKnown RBP eCLIP5.1□□□□□ -1.59
MSR1-209ENST00000518960 ANO8Q9HCE9 1232 aaPredicted RBP5.1□□□□□ -1.59
MSR1-209ENST00000518960 BICRAQ9NZM4 1560 aa5.09□□□□□ -1.59
MSR1-209ENST00000518960 SPDYE16A6NNV3 312 aaPredicted RBP5.09□□□□□ -1.59
MSR1-209ENST00000518960 EVI5O60447 810 aa5.09□□□□□ -1.59
MSR1-209ENST00000518960 VSIG10Q8N0Z9 540 aa5.09□□□□□ -1.59
MSR1-209ENST00000518960 LHX6Q9UPM6 363 aa5.09□□□□□ -1.59
MSR1-209ENST00000518960 KCNH8Q96L42 1107 aa5.08□□□□□ -1.6
MSR1-209ENST00000518960 KRTAP3-3Q9BYR6 98 aa5.08□□□□□ -1.6
MSR1-209ENST00000518960 KRTAP3-2Q9BYR7 98 aa5.08□□□□□ -1.6
MSR1-209ENST00000518960 EMILIN3Q9NT22 766 aa5.08□□□□□ -1.6
MSR1-209ENST00000518960 PPP4R3BQ5MIZ7 849 aa5.07□□□□□ -1.6
MSR1-209ENST00000518960 P3H3Q8IVL6 736 aa5.07□□□□□ -1.6
MSR1-209ENST00000518960 ARIH1Q9Y4X5 557 aaPredicted RBP5.07□□□□□ -1.6
MSR1-209ENST00000518960 KDM4FA0A1W2PPD8 638 aa5.06□□□□□ -1.6
MSR1-209ENST00000518960 DPYSL4O14531 572 aa5.06□□□□□ -1.6
MSR1-209ENST00000518960 PBX2P40425 430 aa5.06□□□□□ -1.6
MSR1-209ENST00000518960 ARHGEF1Q92888 912 aaKnown RBP5.06□□□□□ -1.6
MSR1-209ENST00000518960 ZNF454Q8N9F8 522 aa5.05□□□□□ -1.6
MSR1-209ENST00000518960 ARHGAP33O14559 1287 aa5.04□□□□□ -1.6
MSR1-209ENST00000518960 EPAS1Q99814 870 aa5.04□□□□□ -1.6
MSR1-209ENST00000518960 PHF14O94880 888 aa5.03□□□□□ -1.6
MSR1-209ENST00000518960 PTGER2P43116 358 aa5.03□□□□□ -1.6
MSR1-209ENST00000518960 FOSBP53539 338 aa5.03□□□□□ -1.6
MSR1-209ENST00000518960 FBXW7Q969H0 707 aa5.03□□□□□ -1.6
MSR1-209ENST00000518960 ZDHHC16Q969W1 377 aa5.03□□□□□ -1.6
MSR1-209ENST00000518960 PTPREP23469 700 aa5.02□□□□□ -1.61
MSR1-209ENST00000518960 PDIA6Q15084 440 aa5.02□□□□□ -1.61
MSR1-209ENST00000518960 TYW1BQ6NUM6 668 aa5.02□□□□□ -1.61
MSR1-209ENST00000518960 JPH4Q96JJ6 628 aa5.02□□□□□ -1.61
MSR1-209ENST00000518960 STAC3Q96MF2 364 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms