RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 FANCAO15360 1455 aa37.72■■■■□ 3.63
PCM1-209ENST00000518930 GPATCH8Q9UKJ3 1502 aaKnown RBP37.7■■■■□ 3.63
PCM1-209ENST00000518930 NEO1Q92859 1461 aa37.7■■■■□ 3.63
PCM1-209ENST00000518930 EFCAB2Q5VUJ9 269 aa37.63■■■■□ 3.61
PCM1-209ENST00000518930 PHLDB1Q86UU1 1377 aa37.62■■■■□ 3.61
PCM1-209ENST00000518930 KDM6BO15054 1643 aa37.61■■■■□ 3.61
PCM1-209ENST00000518930 AKNAQ7Z591 1439 aa37.59■■■■□ 3.61
PCM1-209ENST00000518930 CFDP1Q9UEE9 299 aaPredicted RBP37.58■■■■□ 3.61
PCM1-209ENST00000518930 MYOM3Q5VTT5 1437 aa37.56■■■■□ 3.6
PCM1-209ENST00000518930 PPARGC1BQ86YN6 1023 aaKnown RBP37.55■■■■□ 3.6
PCM1-209ENST00000518930 ADGRL1O94910 1474 aa37.54■■■■□ 3.6
PCM1-209ENST00000518930 SAMD9LQ8IVG5 1584 aa37.51■■■■□ 3.6
PCM1-209ENST00000518930 ZNF777Q9ULD5 760 aaPredicted RBP37.51■■■■□ 3.6
PCM1-209ENST00000518930 ABCC1P33527 1531 aa37.49■■■■□ 3.59
PCM1-209ENST00000518930 PLEKHH2Q8IVE3 1493 aa37.46■■■■□ 3.59
PCM1-209ENST00000518930 MIA2Q96PC5 1412 aa37.46■■■■□ 3.59
PCM1-209ENST00000518930 DENND4BO75064 1496 aaPredicted RBP37.44■■■■□ 3.58
PCM1-209ENST00000518930 SCAPERQ9BY12 1400 aa37.44■■■■□ 3.58
PCM1-209ENST00000518930 CAMSAP2Q08AD1 1489 aa37.42■■■■□ 3.58
PCM1-209ENST00000518930 COL17A1Q9UMD9 1497 aaPredicted RBP37.42■■■■□ 3.58
PCM1-209ENST00000518930 SYCP2Q9BX26 1530 aa37.41■■■■□ 3.58
PCM1-209ENST00000518930 FGD6Q6ZV73 1430 aa37.4■■■■□ 3.58
PCM1-209ENST00000518930 RICTORQ6R327 1708 aa37.39■■■■□ 3.58
PCM1-209ENST00000518930 PTPN23Q9H3S7 1636 aa37.38■■■■□ 3.57
PCM1-209ENST00000518930 POGZQ7Z3K3 1410 aa37.36■■■■□ 3.57
PCM1-209ENST00000518930 FRMPD1Q5SYB0 1578 aa37.36■■■■□ 3.57
PCM1-209ENST00000518930 KIAA1107Q9UPP5 1409 aa37.36■■■■□ 3.57
PCM1-209ENST00000518930 ZNF644Q9H582 1327 aaPredicted RBP37.34■■■■□ 3.57
PCM1-209ENST00000518930 ARHGEF12Q9NZN5 1544 aa37.33■■■■□ 3.57
PCM1-209ENST00000518930 ZNF518AQ6AHZ1 1483 aa37.33■■■■□ 3.57
PCM1-209ENST00000518930 RAPGEF3O95398 923 aa37.31■■■■□ 3.56
PCM1-209ENST00000518930 TCOF1Q13428 1488 aaKnown RBP37.28■■■■□ 3.56
PCM1-209ENST00000518930 HNRNPMP52272 730 aaKnown RBP eCLIP37.26■■■■□ 3.56
PCM1-209ENST00000518930 TRAPPC8Q9Y2L5 1435 aa37.26■■■■□ 3.55
PCM1-209ENST00000518930 ZMYM4Q5VZL5 1548 aa37.26■■■■□ 3.55
PCM1-209ENST00000518930 KDM5CP41229 1560 aa37.25■■■■□ 3.55
PCM1-209ENST00000518930 ARHGEF5Q12774 1597 aa37.24■■■■□ 3.55
PCM1-209ENST00000518930 MBD5Q9P267 1494 aa37.22■■■■□ 3.55
PCM1-209ENST00000518930 CCDC141Q6ZP82 1450 aa37.2■■■■□ 3.55
PCM1-209ENST00000518930 HECW2Q9P2P5 1572 aa37.2■■■■□ 3.55
PCM1-209ENST00000518930 AFAP1Q8N556 730 aa37.19■■■■□ 3.54
PCM1-209ENST00000518930 FAM50AQ14320 339 aaKnown RBP37.16■■■■□ 3.54
PCM1-209ENST00000518930 RSPH4AQ5TD94 716 aa37.15■■■■□ 3.54
PCM1-209ENST00000518930 MAGI2Q86UL8 1455 aa37.14■■■■□ 3.54
PCM1-209ENST00000518930 ZFYVE16Q7Z3T8 1539 aa37.13■■■■□ 3.53
PCM1-209ENST00000518930 DNMT1P26358 1616 aaKnown RBP37.13■■■■□ 3.53
PCM1-209ENST00000518930 RRBP1Q9P2E9 1410 aaKnown RBP37.12■■■■□ 3.53
PCM1-209ENST00000518930 MYT1LQ9UL68 1186 aa37.12■■■■□ 3.53
PCM1-209ENST00000518930 CROCC2H7BZ55 1655 aa37.12■■■■□ 3.53
PCM1-209ENST00000518930 ARHGEF40Q8TER5 1519 aa37.11■■■■□ 3.53
PCM1-209ENST00000518930 MLH3Q9UHC1 1453 aa37.1■■■■□ 3.53
PCM1-209ENST00000518930 SPAG9O60271 1321 aaKnown RBP37.1■■■■□ 3.53
PCM1-209ENST00000518930 INO80Q9ULG1 1556 aaPredicted RBP37.09■■■■□ 3.53
PCM1-209ENST00000518930 ATP7AQ04656 1500 aa37.08■■■■□ 3.53
PCM1-209ENST00000518930 KIDINS220Q9ULH0 1771 aa37.06■■■■□ 3.52
PCM1-209ENST00000518930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.05■■■■□ 3.52
PCM1-209ENST00000518930 DAPK1P53355 1430 aa37.05■■■■□ 3.52
PCM1-209ENST00000518930 TSPY4P0CV99 314 aa37.04■■■■□ 3.52
PCM1-209ENST00000518930 TSPY10P0CW01 314 aa37.04■■■■□ 3.52
PCM1-209ENST00000518930 MAST1Q9Y2H9 1570 aa37.03■■■■□ 3.52
PCM1-209ENST00000518930 ABCC5O15440 1437 aa37.02■■■■□ 3.52
PCM1-209ENST00000518930 YEATS2Q9ULM3 1422 aa37.02■■■■□ 3.52
PCM1-209ENST00000518930 SHANK2Q9UPX8 1470 aa37.02■■■■□ 3.52
PCM1-209ENST00000518930 ABCA6Q8N139 1617 aa37.01■■■■□ 3.52
PCM1-209ENST00000518930 RTEL1-TNFRSF6BF6WH68 1400 aa37■■■■□ 3.51
PCM1-209ENST00000518930 C9orf84Q5VXU9 1444 aa37■■■■□ 3.51
PCM1-209ENST00000518930 DIP2CQ9Y2E4 1556 aa37■■■■□ 3.51
PCM1-209ENST00000518930 ADGBQ8N7X0 1667 aa36.93■■■■□ 3.5
PCM1-209ENST00000518930 ATP10AO60312 1499 aa36.92■■■■□ 3.5
PCM1-209ENST00000518930 PLXNC1O60486 1568 aa36.91■■■■□ 3.5
PCM1-209ENST00000518930 ITGAEP38570 1179 aa36.87■■■■□ 3.49
PCM1-209ENST00000518930 REREQ9P2R6 1566 aa36.87■■■■□ 3.49
PCM1-209ENST00000518930 CHIC2Q9UKJ5 165 aa36.83■■■■□ 3.49
PCM1-209ENST00000518930 ADGRL2O95490 1459 aa36.82■■■■□ 3.48
PCM1-209ENST00000518930 A2MP01023 1474 aa36.82■■■■□ 3.48
PCM1-209ENST00000518930 ANKRD30AQ9BXX3 1397 aa36.81■■■■□ 3.48
PCM1-209ENST00000518930 PTPRKQ15262 1439 aa36.8■■■■□ 3.48
PCM1-209ENST00000518930 SIGLEC1Q9BZZ2 1709 aa36.77■■■■□ 3.48
PCM1-209ENST00000518930 KIF15Q9NS87 1388 aa36.76■■■■□ 3.47
PCM1-209ENST00000518930 ARID4BQ4LE39 1312 aaPredicted RBP36.75■■■■□ 3.47
PCM1-209ENST00000518930 NCOA1Q15788 1441 aa36.74■■■■□ 3.47
PCM1-209ENST00000518930 DUOX2Q9NRD8 1548 aa36.74■■■■□ 3.47
PCM1-209ENST00000518930 AGLP35573 1532 aa36.72■■■■□ 3.47
PCM1-209ENST00000518930 ROCK1Q13464 1354 aa36.72■■■■□ 3.47
PCM1-209ENST00000518930 DHX29Q7Z478 1369 aaKnown RBP36.71■■■■□ 3.47
PCM1-209ENST00000518930 RRP7BPQ9NSQ0 103 aa36.71■■■■□ 3.47
PCM1-209ENST00000518930 EIF2AK4Q9P2K8 1649 aaKnown RBP36.66■■■■□ 3.46
PCM1-209ENST00000518930 ERBINQ96RT1 1412 aa36.64■■■■□ 3.46
PCM1-209ENST00000518930 BCORL1Q5H9F3 1711 aa36.64■■■■□ 3.46
PCM1-209ENST00000518930 GCC2Q8IWJ2 1684 aa36.58■■■■□ 3.45
PCM1-209ENST00000518930 MLECQ14165 292 aa36.55■■■■□ 3.44
PCM1-209ENST00000518930 ANKRD50Q9ULJ7 1429 aa36.55■■■■□ 3.44
PCM1-209ENST00000518930 KIF3BO15066 747 aa36.54■■■■□ 3.44
PCM1-209ENST00000518930 RNF17Q9BXT8 1623 aaKnown RBP36.52■■■■□ 3.44
PCM1-209ENST00000518930 ADAMTSL3P82987 1691 aa36.51■■■■□ 3.43
PCM1-209ENST00000518930 HFM1A2PYH4 1435 aa36.51■■■■□ 3.43
PCM1-209ENST00000518930 FER1L4A9Z1Z3 1794 aa36.5■■■■□ 3.43
PCM1-209ENST00000518930 NAIPQ13075 1403 aa36.48■■■■□ 3.43
PCM1-209ENST00000518930 MADDQ8WXG6 1647 aa36.47■■■■□ 3.43
PCM1-209ENST00000518930 GGT6Q6P531 493 aa36.46■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms