RNA–Protein interactions for RNA: ENST00000518892.1

LARP1-208, Transcript of La ribonucleoprotein domain family member 1, human

TSL 3

Gene LARP1, Length 399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LARP1-208	ENST00000518892	PREX2	Q70Z35	1606 aa		33.84	■■■■□ 3.01
LARP1-208	ENST00000518892	ARHGAP5	Q13017	1502 aa		33.84	■■■■□ 3.01
LARP1-208	ENST00000518892	SCAPER	Q9BY12	1400 aa		33.83	■■■■□ 3.01
LARP1-208	ENST00000518892	MTUS2	Q5JR59	1369 aa		33.82	■■■■□ 3
LARP1-208	ENST00000518892	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.78	■■■■□ 3
LARP1-208	ENST00000518892	TIAM1	Q13009	1591 aa		33.77	■■■■□ 3
LARP1-208	ENST00000518892	EHBP1L1	Q8N3D4	1523 aa		33.76	■■■■□ 3
LARP1-208	ENST00000518892	POGZ	Q7Z3K3	1410 aa		33.75	■■■□□ 2.99
LARP1-208	ENST00000518892	ZMYM4	Q5VZL5	1548 aa		33.74	■■■□□ 2.99
LARP1-208	ENST00000518892	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.73	■■■□□ 2.99
LARP1-208	ENST00000518892	ARHGEF12	Q9NZN5	1544 aa		33.69	■■■□□ 2.98
LARP1-208	ENST00000518892	CCNB3	Q8WWL7	1395 aa		33.67	■■■□□ 2.98
LARP1-208	ENST00000518892	MAP3K1	Q13233	1512 aa		33.67	■■■□□ 2.98
LARP1-208	ENST00000518892	ABCC1	P33527	1531 aa		33.66	■■■□□ 2.98
LARP1-208	ENST00000518892	ARHGEF40	Q8TER5	1519 aa		33.66	■■■□□ 2.98
LARP1-208	ENST00000518892	AFAP1	Q8N556	730 aa		33.65	■■■□□ 2.98
LARP1-208	ENST00000518892	MAGI2	Q86UL8	1455 aa		33.64	■■■□□ 2.98
LARP1-208	ENST00000518892	YEATS2	Q9ULM3	1422 aa		33.64	■■■□□ 2.98
LARP1-208	ENST00000518892	SAMD9L	Q8IVG5	1584 aa		33.64	■■■□□ 2.98
LARP1-208	ENST00000518892	LRRC9	Q6ZRR7	1453 aa		33.63	■■■□□ 2.97
LARP1-208	ENST00000518892	ITSN2	Q9NZM3	1697 aa		33.62	■■■□□ 2.97
LARP1-208	ENST00000518892	ZNF518A	Q6AHZ1	1483 aa		33.62	■■■□□ 2.97
LARP1-208	ENST00000518892	KDM5C	P41229	1560 aa		33.61	■■■□□ 2.97
LARP1-208	ENST00000518892	KANK4	Q5T7N3	995 aa	Predicted RBP	33.61	■■■□□ 2.97
LARP1-208	ENST00000518892	ZFYVE16	Q7Z3T8	1539 aa		33.61	■■■□□ 2.97
LARP1-208	ENST00000518892	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.61	■■■□□ 2.97
LARP1-208	ENST00000518892	TRAPPC8	Q9Y2L5	1435 aa		33.61	■■■□□ 2.97
LARP1-208	ENST00000518892	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.6	■■■□□ 2.97
LARP1-208	ENST00000518892	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.6	■■■□□ 2.97
LARP1-208	ENST00000518892	NCOA2	Q15596	1464 aa		33.6	■■■□□ 2.97
LARP1-208	ENST00000518892	SIGLEC1	Q9BZZ2	1709 aa		33.55	■■■□□ 2.96
LARP1-208	ENST00000518892	KIAA1107	Q9UPP5	1409 aa		33.52	■■■□□ 2.96
LARP1-208	ENST00000518892	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.51	■■■□□ 2.95	2e-8	■■■■■ 27.3
LARP1-208	ENST00000518892	SYCP2	Q9BX26	1530 aa		33.51	■■■□□ 2.95
LARP1-208	ENST00000518892	ZNF644	Q9H582	1327 aa	Predicted RBP	33.51	■■■□□ 2.95
LARP1-208	ENST00000518892	MLH3	Q9UHC1	1453 aa		33.5	■■■□□ 2.95
LARP1-208	ENST00000518892	HECW2	Q9P2P5	1572 aa		33.49	■■■□□ 2.95
LARP1-208	ENST00000518892	ATP10A	O60312	1499 aa		33.48	■■■□□ 2.95
LARP1-208	ENST00000518892	PLEKHH2	Q8IVE3	1493 aa		33.48	■■■□□ 2.95
LARP1-208	ENST00000518892	ADAMTSL3	P82987	1691 aa		33.48	■■■□□ 2.95
LARP1-208	ENST00000518892	BCORL1	Q5H9F3	1711 aa		33.48	■■■□□ 2.95
LARP1-208	ENST00000518892	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.45	■■■□□ 2.95
LARP1-208	ENST00000518892	KIDINS220	Q9ULH0	1771 aa		33.44	■■■□□ 2.94
LARP1-208	ENST00000518892	DIP2C	Q9Y2E4	1556 aa		33.43	■■■□□ 2.94
LARP1-208	ENST00000518892	APLP2	Q06481	763 aa		33.41	■■■□□ 2.94
LARP1-208	ENST00000518892	C9orf84	Q5VXU9	1444 aa		33.41	■■■□□ 2.94
LARP1-208	ENST00000518892	MBD5	Q9P267	1494 aa		33.41	■■■□□ 2.94
LARP1-208	ENST00000518892	ABCA6	Q8N139	1617 aa		33.41	■■■□□ 2.94
LARP1-208	ENST00000518892	MYT1L	Q9UL68	1186 aa		33.37	■■■□□ 2.93
LARP1-208	ENST00000518892	CAMSAP2	Q08AD1	1489 aa		33.34	■■■□□ 2.93
LARP1-208	ENST00000518892	RERE	Q9P2R6	1566 aa		33.34	■■■□□ 2.93
LARP1-208	ENST00000518892	SPAG9	O60271	1321 aa	Known RBP	33.33	■■■□□ 2.93
LARP1-208	ENST00000518892	MADD	Q8WXG6	1647 aa		33.32	■■■□□ 2.92
LARP1-208	ENST00000518892	INO80	Q9ULG1	1556 aa	Predicted RBP	33.3	■■■□□ 2.92
LARP1-208	ENST00000518892	MYOM3	Q5VTT5	1437 aa		33.3	■■■□□ 2.92
LARP1-208	ENST00000518892	ATP7A	Q04656	1500 aa		33.28	■■■□□ 2.92
LARP1-208	ENST00000518892	PTPRM	P28827	1452 aa		33.26	■■■□□ 2.92
LARP1-208	ENST00000518892	MLEC	Q14165	292 aa		33.26	■■■□□ 2.91
LARP1-208	ENST00000518892	MIA2	Q96PC5	1412 aa		33.26	■■■□□ 2.91
LARP1-208	ENST00000518892	AGL	P35573	1532 aa		33.24	■■■□□ 2.91
LARP1-208	ENST00000518892	RIMS1	Q86UR5	1692 aa	Known RBP	33.23	■■■□□ 2.91
LARP1-208	ENST00000518892	RSPH4A	Q5TD94	716 aa		33.22	■■■□□ 2.91
LARP1-208	ENST00000518892	ARHGEF5	Q12774	1597 aa		33.21	■■■□□ 2.91
LARP1-208	ENST00000518892	CCDC141	Q6ZP82	1450 aa		33.21	■■■□□ 2.91
LARP1-208	ENST00000518892	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.19	■■■□□ 2.9
LARP1-208	ENST00000518892	FER1L4	A9Z1Z3	1794 aa		33.18	■■■□□ 2.9
LARP1-208	ENST00000518892	ADGB	Q8N7X0	1667 aa		33.13	■■■□□ 2.89
LARP1-208	ENST00000518892	PLXNC1	O60486	1568 aa		33.13	■■■□□ 2.89
LARP1-208	ENST00000518892	A2M	P01023	1474 aa		33.13	■■■□□ 2.89
LARP1-208	ENST00000518892	PTPN23	Q9H3S7	1636 aa		33.1	■■■□□ 2.89
LARP1-208	ENST00000518892	FGD6	Q6ZV73	1430 aa		33.1	■■■□□ 2.89
LARP1-208	ENST00000518892	TCOF1	Q13428	1488 aa	Known RBP	33.06	■■■□□ 2.88
LARP1-208	ENST00000518892	TSPY4	P0CV99	314 aa		33.06	■■■□□ 2.88
LARP1-208	ENST00000518892	TSPY10	P0CW01	314 aa		33.06	■■■□□ 2.88
LARP1-208	ENST00000518892	MAST1	Q9Y2H9	1570 aa		33.05	■■■□□ 2.88
LARP1-208	ENST00000518892	DHX29	Q7Z478	1369 aa	Known RBP	33.03	■■■□□ 2.88
LARP1-208	ENST00000518892	ABCC5	O15440	1437 aa		33	■■■□□ 2.87
LARP1-208	ENST00000518892	CEBPA	P49715	358 aa	Predicted RBP	32.97	■■■□□ 2.87
LARP1-208	ENST00000518892	PLPPR3	Q6T4P5	718 aa		32.96	■■■□□ 2.87
LARP1-208	ENST00000518892	CROCC2	H7BZ55	1655 aa		32.95	■■■□□ 2.87
LARP1-208	ENST00000518892	DNMT1	P26358	1616 aa	Known RBP	32.95	■■■□□ 2.86
LARP1-208	ENST00000518892	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.94	■■■□□ 2.86
LARP1-208	ENST00000518892	DAPK1	P53355	1430 aa		32.93	■■■□□ 2.86
LARP1-208	ENST00000518892	C3	P01024	1663 aa		32.91	■■■□□ 2.86
LARP1-208	ENST00000518892	GGT6	Q6P531	493 aa		32.91	■■■□□ 2.86
LARP1-208	ENST00000518892	SHANK2	Q9UPX8	1470 aa		32.9	■■■□□ 2.86
LARP1-208	ENST00000518892	CNTLN	Q9NXG0	1405 aa		32.89	■■■□□ 2.86
LARP1-208	ENST00000518892	SETD1B	Q9UPS6	1966 aa	Known RBP	32.87	■■■□□ 2.85
LARP1-208	ENST00000518892	KIF3B	O15066	747 aa		32.87	■■■□□ 2.85
LARP1-208	ENST00000518892	ESF1	Q9H501	851 aa	Known RBP	32.87	■■■□□ 2.85
LARP1-208	ENST00000518892	LMTK3	Q96Q04	1460 aa		32.86	■■■□□ 2.85
LARP1-208	ENST00000518892	MROH2A	A6NES4	1674 aa		32.86	■■■□□ 2.85
LARP1-208	ENST00000518892	CLTC	Q00610	1675 aa	Known RBP	32.85	■■■□□ 2.85
LARP1-208	ENST00000518892	PPP6R1	Q9UPN7	881 aa		32.85	■■■□□ 2.85
LARP1-208	ENST00000518892	FAM50A	Q14320	339 aa	Known RBP	32.82	■■■□□ 2.84
LARP1-208	ENST00000518892	ZMYM3	Q14202	1370 aa		32.82	■■■□□ 2.84
LARP1-208	ENST00000518892	DUOX2	Q9NRD8	1548 aa		32.78	■■■□□ 2.84
LARP1-208	ENST00000518892	RRP7BP	Q9NSQ0	103 aa		32.77	■■■□□ 2.84
LARP1-208	ENST00000518892	CHIC2	Q9UKJ5	165 aa		32.77	■■■□□ 2.84
LARP1-208	ENST00000518892	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.77	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms