RNA–Protein interactions for RNA: ENST00000518840.5

R3HCC1-204, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene R3HCC1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-204ENST00000518840 ILDR1Q86SU0 546 aaPredicted RBP30.59■■■□□ 2.49
R3HCC1-204ENST00000518840 LRRIQ1Q96JM4 1722 aa30.57■■■□□ 2.48
R3HCC1-204ENST00000518840 EFCAB2Q5VUJ9 269 aa30.57■■■□□ 2.48
R3HCC1-204ENST00000518840 MAGI2Q86UL8 1455 aa30.57■■■□□ 2.48
R3HCC1-204ENST00000518840 SIGLEC1Q9BZZ2 1709 aa30.56■■■□□ 2.48
R3HCC1-204ENST00000518840 MYO5CQ9NQX4 1742 aa30.54■■■□□ 2.48
R3HCC1-204ENST00000518840 CLIP1P30622 1438 aa30.51■■■□□ 2.47
R3HCC1-204ENST00000518840 CASKIN1Q8WXD9 1431 aa30.51■■■□□ 2.47
R3HCC1-204ENST00000518840 PCF11O94913 1555 aaKnown RBP30.5■■■□□ 2.47
R3HCC1-204ENST00000518840 RIMS1Q86UR5 1692 aaKnown RBP30.49■■■□□ 2.47
R3HCC1-204ENST00000518840 ARHGAP5Q13017 1502 aa30.47■■■□□ 2.47
R3HCC1-204ENST00000518840 MLECQ14165 292 aa30.43■■■□□ 2.46
R3HCC1-204ENST00000518840 CCDC18Q5T9S5 1454 aa30.43■■■□□ 2.46
R3HCC1-204ENST00000518840 AFAP1Q8N556 730 aa30.42■■■□□ 2.46
R3HCC1-204ENST00000518840 ATP10AO60312 1499 aa30.42■■■□□ 2.46
R3HCC1-204ENST00000518840 LMTK3Q96Q04 1460 aa30.42■■■□□ 2.46
R3HCC1-204ENST00000518840 ZNF518AQ6AHZ1 1483 aa30.4■■■□□ 2.46
R3HCC1-204ENST00000518840 C9orf84Q5VXU9 1444 aa30.39■■■□□ 2.45
R3HCC1-204ENST00000518840 PLPPR3Q6T4P5 718 aa30.38■■■□□ 2.45
R3HCC1-204ENST00000518840 KDM5CP41229 1560 aa30.37■■■□□ 2.45
R3HCC1-204ENST00000518840 CDC42BPBQ9Y5S2 1711 aa30.37■■■□□ 2.45
R3HCC1-204ENST00000518840 FYCO1Q9BQS8 1478 aa30.36■■■□□ 2.45
R3HCC1-204ENST00000518840 PREX2Q70Z35 1606 aa30.33■■■□□ 2.45
R3HCC1-204ENST00000518840 ARHGEF12Q9NZN5 1544 aa30.32■■■□□ 2.44
R3HCC1-204ENST00000518840 TRAPPC8Q9Y2L5 1435 aa30.3■■■□□ 2.44
R3HCC1-204ENST00000518840 ABCC1P33527 1531 aa30.29■■■□□ 2.44
R3HCC1-204ENST00000518840 FER1L4A9Z1Z3 1794 aa30.28■■■□□ 2.44
R3HCC1-204ENST00000518840 HSPA2P54652 639 aa30.28■■■□□ 2.44
R3HCC1-204ENST00000518840 DIP2CQ9Y2E4 1556 aa30.27■■■□□ 2.44
R3HCC1-204ENST00000518840 MLH3Q9UHC1 1453 aa30.26■■■□□ 2.44
R3HCC1-204ENST00000518840 MYT1LQ9UL68 1186 aa30.26■■■□□ 2.43
R3HCC1-204ENST00000518840 CDC42BPAQ5VT25 1732 aa30.23■■■□□ 2.43
R3HCC1-204ENST00000518840 ABCA6Q8N139 1617 aa30.22■■■□□ 2.43
R3HCC1-204ENST00000518840 CEBPAP49715 358 aaPredicted RBP30.21■■■□□ 2.43
R3HCC1-204ENST00000518840 ITSN2Q9NZM3 1697 aa30.2■■■□□ 2.43
R3HCC1-204ENST00000518840 REREQ9P2R6 1566 aa30.2■■■□□ 2.42
R3HCC1-204ENST00000518840 GPATCH8Q9UKJ3 1502 aaKnown RBP30.19■■■□□ 2.42
R3HCC1-204ENST00000518840 ZNF777Q9ULD5 760 aaPredicted RBP30.17■■■□□ 2.42
R3HCC1-204ENST00000518840 SAMD9LQ8IVG5 1584 aa30.15■■■□□ 2.42
R3HCC1-204ENST00000518840 KIDINS220Q9ULH0 1771 aa30.13■■■□□ 2.41
R3HCC1-204ENST00000518840 AGLP35573 1532 aa30.12■■■□□ 2.41
R3HCC1-204ENST00000518840 SYCP2Q9BX26 1530 aa30.11■■■□□ 2.41
R3HCC1-204ENST00000518840 FBXO41Q8TF61 875 aa30.1■■■□□ 2.41
R3HCC1-204ENST00000518840 HNRNPMP52272 730 aaKnown RBP eCLIP30.09■■■□□ 2.41
R3HCC1-204ENST00000518840 MTUS2Q5JR59 1369 aa30.07■■■□□ 2.4
R3HCC1-204ENST00000518840 CCNB3Q8WWL7 1395 aa30.06■■■□□ 2.4
R3HCC1-204ENST00000518840 CFDP1Q9UEE9 299 aaPredicted RBP30.06■■■□□ 2.4
R3HCC1-204ENST00000518840 CEP162Q5TB80 1403 aa30.05■■■□□ 2.4
R3HCC1-204ENST00000518840 PREX1Q8TCU6 1659 aa30.04■■■□□ 2.4
R3HCC1-204ENST00000518840 KIAA1107Q9UPP5 1409 aa30.04■■■□□ 2.4
R3HCC1-204ENST00000518840 SPAG9O60271 1321 aaKnown RBP30.03■■■□□ 2.4
R3HCC1-204ENST00000518840 PLEKHH2Q8IVE3 1493 aa29.99■■■□□ 2.39
R3HCC1-204ENST00000518840 C3P01024 1663 aa29.98■■■□□ 2.39
R3HCC1-204ENST00000518840 ZNF644Q9H582 1327 aaPredicted RBP29.96■■■□□ 2.39
R3HCC1-204ENST00000518840 UHRF1BP1Q6BDS2 1440 aa29.96■■■□□ 2.39
R3HCC1-204ENST00000518840 ESF1Q9H501 851 aaKnown RBP29.96■■■□□ 2.39
R3HCC1-204ENST00000518840 ATP7AQ04656 1500 aa29.96■■■□□ 2.39
R3HCC1-204ENST00000518840 EHBP1L1Q8N3D4 1523 aa29.96■■■□□ 2.39
R3HCC1-204ENST00000518840 TIAM1Q13009 1591 aa29.95■■■□□ 2.39
R3HCC1-204ENST00000518840 INO80Q9ULG1 1556 aaPredicted RBP29.94■■■□□ 2.38
R3HCC1-204ENST00000518840 CNTLNQ9NXG0 1405 aa29.92■■■□□ 2.38
R3HCC1-204ENST00000518840 MBD5Q9P267 1494 aa29.89■■■□□ 2.38
R3HCC1-204ENST00000518840 SETD1BQ9UPS6 1966 aaKnown RBP29.89■■■□□ 2.38
R3HCC1-204ENST00000518840 PLXNC1O60486 1568 aa29.89■■■□□ 2.38
R3HCC1-204ENST00000518840 A2MP01023 1474 aa29.88■■■□□ 2.37
R3HCC1-204ENST00000518840 SUPT6HQ7KZ85 1726 aaKnown RBP29.87■■■□□ 2.37
R3HCC1-204ENST00000518840 STRCQ7RTU9 1775 aa29.87■■■□□ 2.37
R3HCC1-204ENST00000518840 CERKQ8TCT0 537 aa29.85■■■□□ 2.37
R3HCC1-204ENST00000518840 LOC105371045A0A1W2PR82 267 aa29.84■■■□□ 2.37
R3HCC1-204ENST00000518840 ZMYM3Q14202 1370 aa29.83■■■□□ 2.37
R3HCC1-204ENST00000518840 NCOA2Q15596 1464 aa29.81■■■□□ 2.36
R3HCC1-204ENST00000518840 MROH2AA6NES4 1674 aa29.79■■■□□ 2.36
R3HCC1-204ENST00000518840 DMRT2Q9Y5R5 561 aa29.79■■■□□ 2.36
R3HCC1-204ENST00000518840 NPATQ14207 1427 aa29.79■■■□□ 2.36
R3HCC1-204ENST00000518840 GGT6Q6P531 493 aa29.78■■■□□ 2.36
R3HCC1-204ENST00000518840 RTEL1-TNFRSF6BF6WH68 1400 aa29.76■■■□□ 2.35
R3HCC1-204ENST00000518840 CLTCQ00610 1675 aaKnown RBP29.75■■■□□ 2.35
R3HCC1-204ENST00000518840 ADGBQ8N7X0 1667 aa29.74■■■□□ 2.35
R3HCC1-204ENST00000518840 VPS8Q8N3P4 1428 aa29.73■■■□□ 2.35
R3HCC1-204ENST00000518840 CAMSAP2Q08AD1 1489 aa29.73■■■□□ 2.35
R3HCC1-204ENST00000518840 PTPRTO14522 1441 aa29.72■■■□□ 2.35
R3HCC1-204ENST00000518840 NCOA1Q15788 1441 aa29.71■■■□□ 2.35
R3HCC1-204ENST00000518840 CCDC141Q6ZP82 1450 aa29.7■■■□□ 2.35
R3HCC1-204ENST00000518840 DHX29Q7Z478 1369 aaKnown RBP29.7■■■□□ 2.35
R3HCC1-204ENST00000518840 PTPRKQ15262 1439 aa29.7■■■□□ 2.34
R3HCC1-204ENST00000518840 LRRC9Q6ZRR7 1453 aa29.68■■■□□ 2.34
R3HCC1-204ENST00000518840 PPP6R1Q9UPN7 881 aa29.67■■■□□ 2.34
R3HCC1-204ENST00000518840 CAMSAP1Q5T5Y3 1602 aa29.65■■■□□ 2.34
R3HCC1-204ENST00000518840 RSPH4AQ5TD94 716 aa29.64■■■□□ 2.34
R3HCC1-204ENST00000518840 KANK4Q5T7N3 995 aaPredicted RBP29.63■■■□□ 2.33
R3HCC1-204ENST00000518840 MYO3AQ8NEV4 1616 aa29.61■■■□□ 2.33
R3HCC1-204ENST00000518840 KIF3BO15066 747 aa29.61■■■□□ 2.33
R3HCC1-204ENST00000518840 ARHGEF5Q12774 1597 aa29.59■■■□□ 2.33
R3HCC1-204ENST00000518840 NCKAP5LQ9HCH0 1330 aa29.58■■■□□ 2.33
R3HCC1-204ENST00000518840 LTBP4Q8N2S1 1624 aa29.57■■■□□ 2.32
R3HCC1-204ENST00000518840 CEP170BQ9Y4F5 1589 aaPredicted RBP29.57■■■□□ 2.32
R3HCC1-204ENST00000518840 ZNF142P52746 1687 aaPredicted RBP29.56■■■□□ 2.32
R3HCC1-204ENST00000518840 MAP3K1Q13233 1512 aa29.55■■■□□ 2.32
R3HCC1-204ENST00000518840 TSPY4P0CV99 314 aa29.53■■■□□ 2.32
R3HCC1-204ENST00000518840 TSPY10P0CW01 314 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms