RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 AKNAQ7Z591 1439 aa22.43■■□□□ 1.18
TRAPPC9-205ENST00000518839 NPM1P06748 294 aaKnown RBP eCLIP22.43■■□□□ 1.18
TRAPPC9-205ENST00000518839 DAPK1P53355 1430 aa22.41■■□□□ 1.18
TRAPPC9-205ENST00000518839 HFM1A2PYH4 1435 aa22.4■■□□□ 1.18
TRAPPC9-205ENST00000518839 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
TRAPPC9-205ENST00000518839 GCC2Q8IWJ2 1684 aa22.4■■□□□ 1.18
TRAPPC9-205ENST00000518839 CROCC2H7BZ55 1655 aa22.39■■□□□ 1.18
TRAPPC9-205ENST00000518839 RAB3GAP2Q9H2M9 1393 aa22.39■■□□□ 1.18
TRAPPC9-205ENST00000518839 ARAP3Q8WWN8 1544 aa22.37■■□□□ 1.17
TRAPPC9-205ENST00000518839 ADGBQ8N7X0 1667 aa22.37■■□□□ 1.17
TRAPPC9-205ENST00000518839 ABCC5O15440 1437 aa22.36■■□□□ 1.17
TRAPPC9-205ENST00000518839 ASXL2Q76L83 1435 aa22.36■■□□□ 1.17
TRAPPC9-205ENST00000518839 ARHGEF5Q12774 1597 aa22.36■■□□□ 1.17
TRAPPC9-205ENST00000518839 ROCK1Q13464 1354 aa22.36■■□□□ 1.17
TRAPPC9-205ENST00000518839 ARHGAP5Q13017 1502 aa22.36■■□□□ 1.17
TRAPPC9-205ENST00000518839 ABCA9Q8IUA7 1624 aa22.35■■□□□ 1.17
TRAPPC9-205ENST00000518839 PLEKHH2Q8IVE3 1493 aa22.35■■□□□ 1.17
TRAPPC9-205ENST00000518839 KCNH8Q96L42 1107 aa22.35■■□□□ 1.17
TRAPPC9-205ENST00000518839 CLSPNQ9HAW4 1339 aa22.34■■□□□ 1.17
TRAPPC9-205ENST00000518839 ZNF777Q9ULD5 760 aaPredicted RBP22.34■■□□□ 1.17
TRAPPC9-205ENST00000518839 SAMD9LQ8IVG5 1584 aa22.33■■□□□ 1.17
TRAPPC9-205ENST00000518839 ZNF644Q9H582 1327 aaPredicted RBP22.33■■□□□ 1.17
TRAPPC9-205ENST00000518839 PLCH2O75038 1416 aa22.33■■□□□ 1.17
TRAPPC9-205ENST00000518839 SHANK2Q9UPX8 1470 aa22.33■■□□□ 1.16
TRAPPC9-205ENST00000518839 ACIN1Q9UKV3 1341 aaKnown RBP22.32■■□□□ 1.16
TRAPPC9-205ENST00000518839 NAIPQ13075 1403 aa22.32■■□□□ 1.16
TRAPPC9-205ENST00000518839 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
TRAPPC9-205ENST00000518839 RSPH4AQ5TD94 716 aa22.31■■□□□ 1.16
TRAPPC9-205ENST00000518839 ADGRL2O95490 1459 aa22.29■■□□□ 1.16
TRAPPC9-205ENST00000518839 KIAA1107Q9UPP5 1409 aa22.28■■□□□ 1.16
TRAPPC9-205ENST00000518839 MAPKBP1O60336 1514 aa22.27■■□□□ 1.16
TRAPPC9-205ENST00000518839 EFCAB2Q5VUJ9 269 aa22.26■■□□□ 1.15
TRAPPC9-205ENST00000518839 CCDC141Q6ZP82 1450 aa22.26■■□□□ 1.15
TRAPPC9-205ENST00000518839 CHIC2Q9UKJ5 165 aa22.25■■□□□ 1.15
TRAPPC9-205ENST00000518839 MBD5Q9P267 1494 aa22.25■■□□□ 1.15
TRAPPC9-205ENST00000518839 CYB5RLQ6IPT4 315 aa22.23■■□□□ 1.15
TRAPPC9-205ENST00000518839 SYCP2Q9BX26 1530 aa22.22■■□□□ 1.15
TRAPPC9-205ENST00000518839 MAST1Q9Y2H9 1570 aa22.22■■□□□ 1.15
TRAPPC9-205ENST00000518839 ANKRD30AQ9BXX3 1397 aa22.22■■□□□ 1.15
TRAPPC9-205ENST00000518839 ABCC1P33527 1531 aa22.21■■□□□ 1.15
TRAPPC9-205ENST00000518839 TSPY4P0CV99 314 aa22.21■■□□□ 1.15
TRAPPC9-205ENST00000518839 TSPY10P0CW01 314 aa22.21■■□□□ 1.15
TRAPPC9-205ENST00000518839 RRP7BPQ9NSQ0 103 aa22.21■■□□□ 1.15
TRAPPC9-205ENST00000518839 C9orf84Q5VXU9 1444 aa22.21■■□□□ 1.15
TRAPPC9-205ENST00000518839 CFAP74Q9C0B2 1584 aa22.21■■□□□ 1.15
TRAPPC9-205ENST00000518839 NCOA1Q15788 1441 aa22.2■■□□□ 1.14
TRAPPC9-205ENST00000518839 HNRNPMP52272 730 aaKnown RBP eCLIP22.17■■□□□ 1.145e-9■■■■■ 31.3
TRAPPC9-205ENST00000518839 FANCAO15360 1455 aa22.15■■□□□ 1.14
TRAPPC9-205ENST00000518839 GLI2P10070 1586 aa22.13■■□□□ 1.13
TRAPPC9-205ENST00000518839 PLXNC1O60486 1568 aa22.12■■□□□ 1.13
TRAPPC9-205ENST00000518839 KDM6BO15054 1643 aa22.12■■□□□ 1.13
TRAPPC9-205ENST00000518839 CD109Q6YHK3 1445 aa22.11■■□□□ 1.13
TRAPPC9-205ENST00000518839 ARHGEF12Q9NZN5 1544 aa22.11■■□□□ 1.13
TRAPPC9-205ENST00000518839 MAP3K4Q9Y6R4 1608 aa22.08■■□□□ 1.13
TRAPPC9-205ENST00000518839 ANKRD50Q9ULJ7 1429 aa22.07■■□□□ 1.12
TRAPPC9-205ENST00000518839 ADGRL1O94910 1474 aa22.07■■□□□ 1.12
TRAPPC9-205ENST00000518839 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
TRAPPC9-205ENST00000518839 RTEL1-TNFRSF6BF6WH68 1400 aa22.06■■□□□ 1.12
TRAPPC9-205ENST00000518839 NEO1Q92859 1461 aa22.04■■□□□ 1.12
TRAPPC9-205ENST00000518839 TRIM52Q96A61 297 aa22.03■■□□□ 1.12
TRAPPC9-205ENST00000518839 TRAPPC8Q9Y2L5 1435 aa22.03■■□□□ 1.12
TRAPPC9-205ENST00000518839 DIP2BQ9P265 1576 aa22.03■■□□□ 1.12
TRAPPC9-205ENST00000518839 DUOX2Q9NRD8 1548 aa22.01■■□□□ 1.11
TRAPPC9-205ENST00000518839 SCAPERQ9BY12 1400 aa22.01■■□□□ 1.11
TRAPPC9-205ENST00000518839 INO80Q9ULG1 1556 aaPredicted RBP21.99■■□□□ 1.11
TRAPPC9-205ENST00000518839 ZFYVE16Q7Z3T8 1539 aa21.99■■□□□ 1.11
TRAPPC9-205ENST00000518839 SPAG9O60271 1321 aaKnown RBP21.98■■□□□ 1.11
TRAPPC9-205ENST00000518839 ZNF518AQ6AHZ1 1483 aa21.97■■□□□ 1.11
TRAPPC9-205ENST00000518839 KDM5DQ9BY66 1539 aa21.97■■□□□ 1.11
TRAPPC9-205ENST00000518839 ERBINQ96RT1 1412 aa21.97■■□□□ 1.11
TRAPPC9-205ENST00000518839 ATP7AQ04656 1500 aa21.96■■□□□ 1.11
TRAPPC9-205ENST00000518839 MPHOSPH9Q99550 1183 aa21.95■■□□□ 1.1
TRAPPC9-205ENST00000518839 TIMELESSQ9UNS1 1208 aa21.94■■□□□ 1.1
TRAPPC9-205ENST00000518839 UNC13BO14795 1591 aa21.94■■□□□ 1.1
TRAPPC9-205ENST00000518839 KDM5CP41229 1560 aa21.92■■□□□ 1.1
TRAPPC9-205ENST00000518839 POGZQ7Z3K3 1410 aa21.92■■□□□ 1.1
TRAPPC9-205ENST00000518839 PZPP20742 1482 aa21.91■■□□□ 1.1
TRAPPC9-205ENST00000518839 AFAP1Q8N556 730 aa21.91■■□□□ 1.1
TRAPPC9-205ENST00000518839 DENND4BO75064 1496 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC9-205ENST00000518839 TEX14Q8IWB6 1497 aa21.9■■□□□ 1.1
TRAPPC9-205ENST00000518839 FAM69CQ0P6D2 419 aa21.9■■□□□ 1.1
TRAPPC9-205ENST00000518839 SLC4A1APQ9BWU0 796 aaKnown RBP21.89■■□□□ 1.09
TRAPPC9-205ENST00000518839 KIF13AQ9H1H9 1805 aa21.89■■□□□ 1.09
TRAPPC9-205ENST00000518839 KIDINS220Q9ULH0 1771 aa21.88■■□□□ 1.09
TRAPPC9-205ENST00000518839 EIF2AK4Q9P2K8 1649 aaKnown RBP21.88■■□□□ 1.09
TRAPPC9-205ENST00000518839 HECW2Q9P2P5 1572 aa21.87■■□□□ 1.09
TRAPPC9-205ENST00000518839 MLH3Q9UHC1 1453 aa21.87■■□□□ 1.09
TRAPPC9-205ENST00000518839 NUP155O75694 1391 aa21.87■■□□□ 1.09
TRAPPC9-205ENST00000518839 PPRC1Q5VV67 1664 aaKnown RBP21.85■■□□□ 1.09
TRAPPC9-205ENST00000518839 MAGI2Q86UL8 1455 aa21.85■■□□□ 1.09
TRAPPC9-205ENST00000518839 RICTORQ6R327 1708 aa21.85■■□□□ 1.09
TRAPPC9-205ENST00000518839 IQGAP3Q86VI3 1631 aa21.84■■□□□ 1.09
TRAPPC9-205ENST00000518839 TSPOAP1O95153 1857 aa21.84■■□□□ 1.09
TRAPPC9-205ENST00000518839 SIN3AQ96ST3 1273 aa21.83■■□□□ 1.09
TRAPPC9-205ENST00000518839 MYT1LQ9UL68 1186 aa21.82■■□□□ 1.08
TRAPPC9-205ENST00000518839 FAM135AQ9P2D6 1515 aa21.81■■□□□ 1.08
TRAPPC9-205ENST00000518839 DEPDC5O75140 1603 aa21.81■■□□□ 1.08
TRAPPC9-205ENST00000518839 NEUROD1Q13562 356 aa21.81■■□□□ 1.08
TRAPPC9-205ENST00000518839 ANKRD30BQ9BXX2 1392 aa21.8■■□□□ 1.08
TRAPPC9-205ENST00000518839 DHX29Q7Z478 1369 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms