RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 CCNB3Q8WWL7 1395 aa35.71■■■■□ 3.31
NKX6-3-201ENST00000518699 ARHGAP5Q13017 1502 aa35.7■■■■□ 3.31
NKX6-3-201ENST00000518699 FANCAO15360 1455 aa35.7■■■■□ 3.31
NKX6-3-201ENST00000518699 PHLDB1Q86UU1 1377 aa35.63■■■■□ 3.29
NKX6-3-201ENST00000518699 MYOM3Q5VTT5 1437 aa35.6■■■■□ 3.29
NKX6-3-201ENST00000518699 SAMD9LQ8IVG5 1584 aa35.58■■■■□ 3.29
NKX6-3-201ENST00000518699 KDM6BO15054 1643 aa35.58■■■■□ 3.29
NKX6-3-201ENST00000518699 AKNAQ7Z591 1439 aa35.57■■■■□ 3.28
NKX6-3-201ENST00000518699 EFCAB2Q5VUJ9 269 aa35.56■■■■□ 3.28
NKX6-3-201ENST00000518699 ABCC1P33527 1531 aa35.55■■■■□ 3.28
NKX6-3-201ENST00000518699 ADGRL1O94910 1474 aa35.52■■■■□ 3.28
NKX6-3-201ENST00000518699 MIA2Q96PC5 1412 aa35.52■■■■□ 3.28
NKX6-3-201ENST00000518699 CFDP1Q9UEE9 299 aaPredicted RBP35.51■■■■□ 3.28
NKX6-3-201ENST00000518699 COL17A1Q9UMD9 1497 aaPredicted RBP35.48■■■■□ 3.27
NKX6-3-201ENST00000518699 RICTORQ6R327 1708 aa35.47■■■■□ 3.27
NKX6-3-201ENST00000518699 PLEKHH2Q8IVE3 1493 aa35.47■■■■□ 3.27
NKX6-3-201ENST00000518699 FRMPD1Q5SYB0 1578 aa35.45■■■■□ 3.27
NKX6-3-201ENST00000518699 CAMSAP2Q08AD1 1489 aa35.45■■■■□ 3.27
NKX6-3-201ENST00000518699 FGD6Q6ZV73 1430 aa35.44■■■■□ 3.26
NKX6-3-201ENST00000518699 PPARGC1BQ86YN6 1023 aaKnown RBP35.43■■■■□ 3.26
NKX6-3-201ENST00000518699 SYCP2Q9BX26 1530 aa35.43■■■■□ 3.26
NKX6-3-201ENST00000518699 PTPN23Q9H3S7 1636 aa35.42■■■■□ 3.26
NKX6-3-201ENST00000518699 DENND4BO75064 1496 aaPredicted RBP35.42■■■■□ 3.26
NKX6-3-201ENST00000518699 SCAPERQ9BY12 1400 aa35.42■■■■□ 3.26
NKX6-3-201ENST00000518699 KIAA1107Q9UPP5 1409 aa35.42■■■■□ 3.26
NKX6-3-201ENST00000518699 POGZQ7Z3K3 1410 aa35.4■■■■□ 3.26
NKX6-3-201ENST00000518699 ARHGEF12Q9NZN5 1544 aa35.4■■■■□ 3.26
NKX6-3-201ENST00000518699 TCOF1Q13428 1488 aaKnown RBP35.39■■■■□ 3.26
NKX6-3-201ENST00000518699 ZNF777Q9ULD5 760 aaPredicted RBP35.38■■■■□ 3.25
NKX6-3-201ENST00000518699 KDM5CP41229 1560 aa35.36■■■■□ 3.25
NKX6-3-201ENST00000518699 ZMYM4Q5VZL5 1548 aa35.35■■■■□ 3.25
NKX6-3-201ENST00000518699 ZNF518AQ6AHZ1 1483 aa35.35■■■■□ 3.25
NKX6-3-201ENST00000518699 ZNF644Q9H582 1327 aaPredicted RBP35.33■■■■□ 3.25
NKX6-3-201ENST00000518699 ARHGEF5Q12774 1597 aa35.33■■■■□ 3.25
NKX6-3-201ENST00000518699 MBD5Q9P267 1494 aa35.32■■■■□ 3.25
NKX6-3-201ENST00000518699 TRAPPC8Q9Y2L5 1435 aa35.29■■■■□ 3.24
NKX6-3-201ENST00000518699 RAPGEF3O95398 923 aa35.25■■■■□ 3.23
NKX6-3-201ENST00000518699 RRBP1Q9P2E9 1410 aaKnown RBP35.24■■■■□ 3.23
NKX6-3-201ENST00000518699 CCDC141Q6ZP82 1450 aa35.24■■■■□ 3.23
NKX6-3-201ENST00000518699 HECW2Q9P2P5 1572 aa35.24■■■■□ 3.23
NKX6-3-201ENST00000518699 CROCC2H7BZ55 1655 aa35.23■■■■□ 3.23
NKX6-3-201ENST00000518699 DNMT1P26358 1616 aaKnown RBP35.23■■■■□ 3.23
NKX6-3-201ENST00000518699 HNRNPMP52272 730 aaKnown RBP eCLIP35.21■■■■□ 3.23
NKX6-3-201ENST00000518699 MAGI2Q86UL8 1455 aa35.2■■■■□ 3.23
NKX6-3-201ENST00000518699 INO80Q9ULG1 1556 aaPredicted RBP35.2■■■■□ 3.23
NKX6-3-201ENST00000518699 ARHGEF40Q8TER5 1519 aa35.18■■■■□ 3.22
NKX6-3-201ENST00000518699 MLH3Q9UHC1 1453 aa35.18■■■■□ 3.22
NKX6-3-201ENST00000518699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.18■■■■□ 3.22
NKX6-3-201ENST00000518699 RSPH4AQ5TD94 716 aa35.16■■■■□ 3.22
NKX6-3-201ENST00000518699 AFAP1Q8N556 730 aa35.16■■■■□ 3.22
NKX6-3-201ENST00000518699 ZFYVE16Q7Z3T8 1539 aa35.16■■■■□ 3.22
NKX6-3-201ENST00000518699 KIDINS220Q9ULH0 1771 aa35.15■■■■□ 3.22
NKX6-3-201ENST00000518699 MAST1Q9Y2H9 1570 aa35.15■■■■□ 3.22
NKX6-3-201ENST00000518699 ATP7AQ04656 1500 aa35.13■■■■□ 3.21
NKX6-3-201ENST00000518699 SHANK2Q9UPX8 1470 aa35.12■■■■□ 3.21
NKX6-3-201ENST00000518699 DAPK1P53355 1430 aa35.11■■■■□ 3.21
NKX6-3-201ENST00000518699 ABCC5O15440 1437 aa35.09■■■■□ 3.21
NKX6-3-201ENST00000518699 ABCA6Q8N139 1617 aa35.09■■■■□ 3.21
NKX6-3-201ENST00000518699 FAM50AQ14320 339 aaKnown RBP35.08■■■■□ 3.21
NKX6-3-201ENST00000518699 DIP2CQ9Y2E4 1556 aa35.07■■■■□ 3.2
NKX6-3-201ENST00000518699 RTEL1-TNFRSF6BF6WH68 1400 aa35.07■■■■□ 3.2
NKX6-3-201ENST00000518699 YEATS2Q9ULM3 1422 aa35.06■■■■□ 3.2
NKX6-3-201ENST00000518699 SPAG9O60271 1321 aaKnown RBP35.06■■■■□ 3.2
NKX6-3-201ENST00000518699 C9orf84Q5VXU9 1444 aa35.04■■■■□ 3.2
NKX6-3-201ENST00000518699 PLXNC1O60486 1568 aa35.03■■■■□ 3.2
NKX6-3-201ENST00000518699 ADGBQ8N7X0 1667 aa35.02■■■■□ 3.2
NKX6-3-201ENST00000518699 REREQ9P2R6 1566 aa35■■■■□ 3.19
NKX6-3-201ENST00000518699 TSPY4P0CV99 314 aa34.97■■■■□ 3.19
NKX6-3-201ENST00000518699 TSPY10P0CW01 314 aa34.97■■■■□ 3.19
NKX6-3-201ENST00000518699 ATP10AO60312 1499 aa34.95■■■■□ 3.19
NKX6-3-201ENST00000518699 ADGRL2O95490 1459 aa34.95■■■■□ 3.19
NKX6-3-201ENST00000518699 PTPRKQ15262 1439 aa34.91■■■■□ 3.18
NKX6-3-201ENST00000518699 MYT1LQ9UL68 1186 aa34.91■■■■□ 3.18
NKX6-3-201ENST00000518699 SIGLEC1Q9BZZ2 1709 aa34.9■■■■□ 3.18
NKX6-3-201ENST00000518699 A2MP01023 1474 aa34.85■■■■□ 3.17
NKX6-3-201ENST00000518699 AGLP35573 1532 aa34.83■■■■□ 3.17
NKX6-3-201ENST00000518699 ANKRD30AQ9BXX3 1397 aa34.83■■■■□ 3.17
NKX6-3-201ENST00000518699 NCOA1Q15788 1441 aa34.83■■■■□ 3.17
NKX6-3-201ENST00000518699 ROCK1Q13464 1354 aa34.82■■■■□ 3.17
NKX6-3-201ENST00000518699 DUOX2Q9NRD8 1548 aa34.81■■■■□ 3.16
NKX6-3-201ENST00000518699 BCORL1Q5H9F3 1711 aa34.8■■■■□ 3.16
NKX6-3-201ENST00000518699 KIF15Q9NS87 1388 aa34.79■■■■□ 3.16
NKX6-3-201ENST00000518699 EIF2AK4Q9P2K8 1649 aaKnown RBP34.78■■■■□ 3.16
NKX6-3-201ENST00000518699 CHIC2Q9UKJ5 165 aa34.76■■■■□ 3.16
NKX6-3-201ENST00000518699 DHX29Q7Z478 1369 aaKnown RBP34.76■■■■□ 3.16
NKX6-3-201ENST00000518699 ITGAEP38570 1179 aa34.75■■■■□ 3.15
NKX6-3-201ENST00000518699 ERBINQ96RT1 1412 aa34.72■■■■□ 3.15
NKX6-3-201ENST00000518699 GCC2Q8IWJ2 1684 aa34.72■■■■□ 3.15
NKX6-3-201ENST00000518699 RRP7BPQ9NSQ0 103 aa34.68■■■■□ 3.14
NKX6-3-201ENST00000518699 RNF17Q9BXT8 1623 aaKnown RBP34.66■■■■□ 3.14
NKX6-3-201ENST00000518699 HFM1A2PYH4 1435 aa34.63■■■■□ 3.13
NKX6-3-201ENST00000518699 ADAMTSL3P82987 1691 aa34.61■■■■□ 3.13
NKX6-3-201ENST00000518699 ANKRD50Q9ULJ7 1429 aa34.61■■■■□ 3.13
NKX6-3-201ENST00000518699 ARID4BQ4LE39 1312 aaPredicted RBP34.61■■■■□ 3.13
NKX6-3-201ENST00000518699 DEPDC5O75140 1603 aa34.61■■■■□ 3.13
NKX6-3-201ENST00000518699 NAIPQ13075 1403 aa34.59■■■■□ 3.13
NKX6-3-201ENST00000518699 MROH1Q8NDA8 1641 aa34.57■■■■□ 3.13
NKX6-3-201ENST00000518699 FER1L4A9Z1Z3 1794 aa34.55■■■■□ 3.12
NKX6-3-201ENST00000518699 PRDM15P57071 1507 aaPredicted RBP34.55■■■■□ 3.12
NKX6-3-201ENST00000518699 FAM135AQ9P2D6 1515 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms