RNA–Protein interactions for RNA: ENST00000518557.5

LINC00599-202, long intergenic non-protein coding RNA 599, humanhuman

TSL 1 (best)

Gene LINC00599, Length 869 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00599-202ENST00000518557 PPP4R3CPQ6ZMV5 832 aa15.67■□□□□ 0.1
LINC00599-202ENST00000518557 ARHGEF40Q8TER5 1519 aa15.66■□□□□ 0.1
LINC00599-202ENST00000518557 PCF11O94913 1555 aaKnown RBP15.66■□□□□ 0.1
LINC00599-202ENST00000518557 LRRIQ1Q96JM4 1722 aa15.65■□□□□ 0.1
LINC00599-202ENST00000518557 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
LINC00599-202ENST00000518557 MAGI2Q86UL8 1455 aa15.65■□□□□ 0.1
LINC00599-202ENST00000518557 KIF14Q15058 1648 aa15.65■□□□□ 0.1
LINC00599-202ENST00000518557 POGZQ7Z3K3 1410 aa15.65■□□□□ 0.1
LINC00599-202ENST00000518557 ADAMTSL3P82987 1691 aa15.64■□□□□ 0.09
LINC00599-202ENST00000518557 CLIP1P30622 1438 aa15.64■□□□□ 0.09
LINC00599-202ENST00000518557 FYCO1Q9BQS8 1478 aa15.63■□□□□ 0.09
LINC00599-202ENST00000518557 SCAPERQ9BY12 1400 aa15.62■□□□□ 0.09
LINC00599-202ENST00000518557 ATP1B4Q9UN42 357 aaPredicted RBP15.62■□□□□ 0.09
LINC00599-202ENST00000518557 YEATS2Q9ULM3 1422 aa15.61■□□□□ 0.09
LINC00599-202ENST00000518557 EFCAB2Q5VUJ9 269 aa15.61■□□□□ 0.09
LINC00599-202ENST00000518557 PTPRMP28827 1452 aa15.59■□□□□ 0.09
LINC00599-202ENST00000518557 ZFYVE16Q7Z3T8 1539 aa15.59■□□□□ 0.09
LINC00599-202ENST00000518557 BCORL1Q5H9F3 1711 aa15.59■□□□□ 0.09
LINC00599-202ENST00000518557 MYO5CQ9NQX4 1742 aa15.58■□□□□ 0.08
LINC00599-202ENST00000518557 HECW2Q9P2P5 1572 aa15.58■□□□□ 0.08
LINC00599-202ENST00000518557 KDM5CP41229 1560 aa15.57■□□□□ 0.08
LINC00599-202ENST00000518557 SIGLEC1Q9BZZ2 1709 aa15.55■□□□□ 0.08
LINC00599-202ENST00000518557 ARHGAP5Q13017 1502 aa15.55■□□□□ 0.08
LINC00599-202ENST00000518557 ZNF518AQ6AHZ1 1483 aa15.55■□□□□ 0.08
LINC00599-202ENST00000518557 PREX2Q70Z35 1606 aa15.54■□□□□ 0.08
LINC00599-202ENST00000518557 MADDQ8WXG6 1647 aa15.54■□□□□ 0.08
LINC00599-202ENST00000518557 ARHGEF12Q9NZN5 1544 aa15.53■□□□□ 0.08
LINC00599-202ENST00000518557 ATP10AO60312 1499 aa15.52■□□□□ 0.08
LINC00599-202ENST00000518557 CDC42BPBQ9Y5S2 1711 aa15.52■□□□□ 0.08
LINC00599-202ENST00000518557 ABCC1P33527 1531 aa15.52■□□□□ 0.07
LINC00599-202ENST00000518557 MLH3Q9UHC1 1453 aa15.52■□□□□ 0.07
LINC00599-202ENST00000518557 C9orf84Q5VXU9 1444 aa15.51■□□□□ 0.07
LINC00599-202ENST00000518557 AFAP1Q8N556 730 aa15.51■□□□□ 0.07
LINC00599-202ENST00000518557 ARID4BQ4LE39 1312 aaPredicted RBP15.5■□□□□ 0.07
LINC00599-202ENST00000518557 GPATCH8Q9UKJ3 1502 aaKnown RBP15.5■□□□□ 0.07
LINC00599-202ENST00000518557 CEP162Q5TB80 1403 aa15.5■□□□□ 0.07
LINC00599-202ENST00000518557 REREQ9P2R6 1566 aa15.49■□□□□ 0.07
LINC00599-202ENST00000518557 TRAPPC8Q9Y2L5 1435 aa15.49■□□□□ 0.07
LINC00599-202ENST00000518557 DIP2CQ9Y2E4 1556 aa15.46■□□□□ 0.07
LINC00599-202ENST00000518557 LMTK3Q96Q04 1460 aa15.46■□□□□ 0.06
LINC00599-202ENST00000518557 CDC42BPAQ5VT25 1732 aa15.46■□□□□ 0.06
LINC00599-202ENST00000518557 KIAA1107Q9UPP5 1409 aa15.45■□□□□ 0.06
LINC00599-202ENST00000518557 SAMD9LQ8IVG5 1584 aa15.44■□□□□ 0.06
LINC00599-202ENST00000518557 ITSN2Q9NZM3 1697 aa15.44■□□□□ 0.06
LINC00599-202ENST00000518557 AGLP35573 1532 aa15.43■□□□□ 0.06
LINC00599-202ENST00000518557 RIMS1Q86UR5 1692 aaKnown RBP15.43■□□□□ 0.06
LINC00599-202ENST00000518557 ABCA6Q8N139 1617 aa15.43■□□□□ 0.06
LINC00599-202ENST00000518557 EHBP1L1Q8N3D4 1523 aa15.41■□□□□ 0.06
LINC00599-202ENST00000518557 MTUS2Q5JR59 1369 aa15.4■□□□□ 0.06
LINC00599-202ENST00000518557 PLEKHH2Q8IVE3 1493 aa15.4■□□□□ 0.06
LINC00599-202ENST00000518557 KIDINS220Q9ULH0 1771 aa15.39■□□□□ 0.05
LINC00599-202ENST00000518557 CCNB3Q8WWL7 1395 aa15.39■□□□□ 0.05
LINC00599-202ENST00000518557 SYCP2Q9BX26 1530 aa15.39■□□□□ 0.05
LINC00599-202ENST00000518557 TIAM1Q13009 1591 aa15.38■□□□□ 0.05
LINC00599-202ENST00000518557 MLECQ14165 292 aa15.38■□□□□ 0.05
LINC00599-202ENST00000518557 CFDP1Q9UEE9 299 aaPredicted RBP15.38■□□□□ 0.05
LINC00599-202ENST00000518557 MBD5Q9P267 1494 aa15.37■□□□□ 0.05
LINC00599-202ENST00000518557 FER1L4A9Z1Z3 1794 aa15.36■□□□□ 0.05
LINC00599-202ENST00000518557 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
LINC00599-202ENST00000518557 VPS8Q8N3P4 1428 aa15.35■□□□□ 0.05
LINC00599-202ENST00000518557 INO80Q9ULG1 1556 aaPredicted RBP15.34■□□□□ 0.05
LINC00599-202ENST00000518557 LOC105371045A0A1W2PR82 267 aa15.34■□□□□ 0.05
LINC00599-202ENST00000518557 HNRNPMP52272 730 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC00599-202ENST00000518557 ZNF777Q9ULD5 760 aaPredicted RBP15.34■□□□□ 0.05
LINC00599-202ENST00000518557 PLXNC1O60486 1568 aa15.33■□□□□ 0.05
LINC00599-202ENST00000518557 SPAG9O60271 1321 aaKnown RBP15.33■□□□□ 0.04
LINC00599-202ENST00000518557 NCOA2Q15596 1464 aa15.33■□□□□ 0.04
LINC00599-202ENST00000518557 ATP7AQ04656 1500 aa15.33■□□□□ 0.04
LINC00599-202ENST00000518557 MAP3K1Q13233 1512 aa15.32■□□□□ 0.04
LINC00599-202ENST00000518557 ZNF644Q9H582 1327 aaPredicted RBP15.31■□□□□ 0.04
LINC00599-202ENST00000518557 LRRC9Q6ZRR7 1453 aa15.29■□□□□ 0.04
LINC00599-202ENST00000518557 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
LINC00599-202ENST00000518557 CNTLNQ9NXG0 1405 aa15.29■□□□□ 0.04
LINC00599-202ENST00000518557 CEBPAP49715 358 aaPredicted RBP15.29■□□□□ 0.04
LINC00599-202ENST00000518557 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
LINC00599-202ENST00000518557 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
LINC00599-202ENST00000518557 CNKSR2Q8WXI2 1034 aa15.29■□□□□ 0.04
LINC00599-202ENST00000518557 MYT1LQ9UL68 1186 aa15.29■□□□□ 0.04
LINC00599-202ENST00000518557 A2MP01023 1474 aa15.28■□□□□ 0.04
LINC00599-202ENST00000518557 HSPA2P54652 639 aa15.28■□□□□ 0.04
LINC00599-202ENST00000518557 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
LINC00599-202ENST00000518557 SUPT6HQ7KZ85 1726 aaKnown RBP15.26■□□□□ 0.03
LINC00599-202ENST00000518557 CAMSAP2Q08AD1 1489 aa15.25■□□□□ 0.03
LINC00599-202ENST00000518557 PREX1Q8TCU6 1659 aa15.25■□□□□ 0.03
LINC00599-202ENST00000518557 RSPH4AQ5TD94 716 aa15.24■□□□□ 0.03
LINC00599-202ENST00000518557 CCDC141Q6ZP82 1450 aa15.24■□□□□ 0.03
LINC00599-202ENST00000518557 C3P01024 1663 aa15.24■□□□□ 0.03
LINC00599-202ENST00000518557 NPATQ14207 1427 aa15.23■□□□□ 0.03
LINC00599-202ENST00000518557 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
LINC00599-202ENST00000518557 KANK4Q5T7N3 995 aaPredicted RBP15.22■□□□□ 0.03
LINC00599-202ENST00000518557 ARHGEF5Q12774 1597 aa15.22■□□□□ 0.03
LINC00599-202ENST00000518557 ZMYM3Q14202 1370 aa15.22■□□□□ 0.03
LINC00599-202ENST00000518557 DHX29Q7Z478 1369 aaKnown RBP15.22■□□□□ 0.03
LINC00599-202ENST00000518557 MROH2AA6NES4 1674 aa15.21■□□□□ 0.03
LINC00599-202ENST00000518557 MIA2Q96PC5 1412 aa15.2■□□□□ 0.02
LINC00599-202ENST00000518557 ADGBQ8N7X0 1667 aa15.2■□□□□ 0.02
LINC00599-202ENST00000518557 SETD1BQ9UPS6 1966 aaKnown RBP15.19■□□□□ 0.02
LINC00599-202ENST00000518557 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
LINC00599-202ENST00000518557 ESF1Q9H501 851 aaKnown RBP15.18■□□□□ 0.02
LINC00599-202ENST00000518557 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms