RNA–Protein interactions for RNA: ENST00000518430.1

GINS4-202, Transcript of GINS complex subunit 4, humanhuman

TSL 2

Gene GINS4, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-202ENST00000518430 ASXL2Q76L83 1435 aa12.79□□□□□ -0.36
GINS4-202ENST00000518430 WDR7Q9Y4E6 1490 aa12.79□□□□□ -0.36
GINS4-202ENST00000518430 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
GINS4-202ENST00000518430 CCNB3Q8WWL7 1395 aa12.79□□□□□ -0.36
GINS4-202ENST00000518430 NCOA2Q15596 1464 aa12.78□□□□□ -0.36
GINS4-202ENST00000518430 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
GINS4-202ENST00000518430 BCANQ96GW7 911 aa12.78□□□□□ -0.36
GINS4-202ENST00000518430 KCNH8Q96L42 1107 aa12.78□□□□□ -0.36
GINS4-202ENST00000518430 SUPT6HQ7KZ85 1726 aaKnown RBP12.78□□□□□ -0.36
GINS4-202ENST00000518430 LRRIQ1Q96JM4 1722 aa12.78□□□□□ -0.36
GINS4-202ENST00000518430 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
GINS4-202ENST00000518430 KIF14Q15058 1648 aa12.77□□□□□ -0.37
GINS4-202ENST00000518430 ANO8Q9HCE9 1232 aaPredicted RBP12.76□□□□□ -0.37
GINS4-202ENST00000518430 MAPKBP1O60336 1514 aa12.76□□□□□ -0.37
GINS4-202ENST00000518430 MYOM3Q5VTT5 1437 aa12.75□□□□□ -0.37
GINS4-202ENST00000518430 MIA2Q96PC5 1412 aa12.75□□□□□ -0.37
GINS4-202ENST00000518430 PHLDB1Q86UU1 1377 aa12.74□□□□□ -0.37
GINS4-202ENST00000518430 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
GINS4-202ENST00000518430 DHX57Q6P158 1386 aaKnown RBP12.73□□□□□ -0.37
GINS4-202ENST00000518430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.73□□□□□ -0.37
GINS4-202ENST00000518430 RRBP1Q9P2E9 1410 aaKnown RBP12.72□□□□□ -0.37
GINS4-202ENST00000518430 NOP58Q9Y2X3 529 aaKnown RBP12.72□□□□□ -0.37
GINS4-202ENST00000518430 GPATCH8Q9UKJ3 1502 aaKnown RBP12.71□□□□□ -0.38
GINS4-202ENST00000518430 ABCC10Q5T3U5 1492 aa12.71□□□□□ -0.38
GINS4-202ENST00000518430 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.38
GINS4-202ENST00000518430 FAM50AQ14320 339 aaKnown RBP12.7□□□□□ -0.38
GINS4-202ENST00000518430 EFCAB2Q5VUJ9 269 aa12.7□□□□□ -0.38
GINS4-202ENST00000518430 RSPH4AQ5TD94 716 aa12.69□□□□□ -0.38
GINS4-202ENST00000518430 PLCH2O75038 1416 aa12.69□□□□□ -0.38
GINS4-202ENST00000518430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.68□□□□□ -0.38
GINS4-202ENST00000518430 FAM69CQ0P6D2 419 aa12.67□□□□□ -0.38
GINS4-202ENST00000518430 CD109Q6YHK3 1445 aa12.66□□□□□ -0.38
GINS4-202ENST00000518430 USP35Q9P2H5 1018 aa12.66□□□□□ -0.38
GINS4-202ENST00000518430 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
GINS4-202ENST00000518430 ITSN2Q9NZM3 1697 aa12.66□□□□□ -0.38
GINS4-202ENST00000518430 ARAP3Q8WWN8 1544 aa12.66□□□□□ -0.38
GINS4-202ENST00000518430 TCOF1Q13428 1488 aaKnown RBP12.65□□□□□ -0.38
GINS4-202ENST00000518430 PLEKHH2Q8IVE3 1493 aa12.65□□□□□ -0.38
GINS4-202ENST00000518430 GLI2P10070 1586 aa12.65□□□□□ -0.38
GINS4-202ENST00000518430 GLIPR1L2Q4G1C9 344 aa12.65□□□□□ -0.38
GINS4-202ENST00000518430 ABCA9Q8IUA7 1624 aa12.65□□□□□ -0.38
GINS4-202ENST00000518430 EIF5BO60841 1220 aaKnown RBP12.64□□□□□ -0.39
GINS4-202ENST00000518430 PPP4R2Q9NY27 417 aa12.64□□□□□ -0.39
GINS4-202ENST00000518430 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
GINS4-202ENST00000518430 ARHGAP5Q13017 1502 aa12.63□□□□□ -0.39
GINS4-202ENST00000518430 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
GINS4-202ENST00000518430 TTC37Q6PGP7 1564 aa12.62□□□□□ -0.39
GINS4-202ENST00000518430 C11orf95C9JLR9 678 aaPredicted RBP12.62□□□□□ -0.39
GINS4-202ENST00000518430 ANP32CO43423 234 aa12.62□□□□□ -0.39
GINS4-202ENST00000518430 KIAA1107Q9UPP5 1409 aa12.62□□□□□ -0.39
GINS4-202ENST00000518430 TSPY4P0CV99 314 aa12.61□□□□□ -0.39
GINS4-202ENST00000518430 TSPY10P0CW01 314 aa12.61□□□□□ -0.39
GINS4-202ENST00000518430 ANP32AP39687 249 aaKnown RBP12.61□□□□□ -0.39
GINS4-202ENST00000518430 PREX2Q70Z35 1606 aa12.61□□□□□ -0.39
GINS4-202ENST00000518430 PTPN23Q9H3S7 1636 aa12.61□□□□□ -0.39
GINS4-202ENST00000518430 FANCAO15360 1455 aa12.6□□□□□ -0.39
GINS4-202ENST00000518430 MYO5CQ9NQX4 1742 aa12.59□□□□□ -0.39
GINS4-202ENST00000518430 CAMSAP2Q08AD1 1489 aa12.59□□□□□ -0.39
GINS4-202ENST00000518430 ITGAEP38570 1179 aa12.59□□□□□ -0.39
GINS4-202ENST00000518430 DIP2BQ9P265 1576 aa12.59□□□□□ -0.39
GINS4-202ENST00000518430 ZNF644Q9H582 1327 aaPredicted RBP12.59□□□□□ -0.39
GINS4-202ENST00000518430 TEX14Q8IWB6 1497 aa12.59□□□□□ -0.39
GINS4-202ENST00000518430 NEO1Q92859 1461 aa12.59□□□□□ -0.39
GINS4-202ENST00000518430 CDC42BPAQ5VT25 1732 aa12.57□□□□□ -0.4
GINS4-202ENST00000518430 CFAP74Q9C0B2 1584 aa12.57□□□□□ -0.4
GINS4-202ENST00000518430 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
GINS4-202ENST00000518430 AKNAQ7Z591 1439 aa12.56□□□□□ -0.4
GINS4-202ENST00000518430 HNRNPMP52272 730 aaKnown RBP eCLIP12.56□□□□□ -0.4
GINS4-202ENST00000518430 RSPH6AQ9H0K4 717 aa12.55□□□□□ -0.4
GINS4-202ENST00000518430 MAP3K4Q9Y6R4 1608 aa12.55□□□□□ -0.4
GINS4-202ENST00000518430 DAPK1P53355 1430 aa12.54□□□□□ -0.4
GINS4-202ENST00000518430 ADGRL1O94910 1474 aa12.54□□□□□ -0.4
GINS4-202ENST00000518430 CCDC136Q96JN2 1154 aa12.54□□□□□ -0.4
GINS4-202ENST00000518430 PKNOX2Q96KN3 472 aa12.54□□□□□ -0.4
GINS4-202ENST00000518430 CDC42BPBQ9Y5S2 1711 aa12.54□□□□□ -0.4
GINS4-202ENST00000518430 SCAPERQ9BY12 1400 aa12.54□□□□□ -0.4
GINS4-202ENST00000518430 CCDC141Q6ZP82 1450 aa12.53□□□□□ -0.4
GINS4-202ENST00000518430 MBD5Q9P267 1494 aa12.53□□□□□ -0.4
GINS4-202ENST00000518430 ARHGEF5Q12774 1597 aa12.53□□□□□ -0.4
GINS4-202ENST00000518430 IPO9Q96P70 1041 aaKnown RBP12.53□□□□□ -0.4
GINS4-202ENST00000518430 ROCK1Q13464 1354 aa12.53□□□□□ -0.4
GINS4-202ENST00000518430 ABCC5O15440 1437 aa12.53□□□□□ -0.4
GINS4-202ENST00000518430 SAMD9LQ8IVG5 1584 aa12.52□□□□□ -0.4
GINS4-202ENST00000518430 SLC24A1O60721 1099 aa12.52□□□□□ -0.41
GINS4-202ENST00000518430 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
GINS4-202ENST00000518430 WASHC2AQ641Q2 1341 aa12.52□□□□□ -0.41
GINS4-202ENST00000518430 ANKRD30AQ9BXX3 1397 aa12.52□□□□□ -0.41
GINS4-202ENST00000518430 SHANK2Q9UPX8 1470 aa12.52□□□□□ -0.41
GINS4-202ENST00000518430 ABCC1P33527 1531 aa12.52□□□□□ -0.41
GINS4-202ENST00000518430 DAXXQ9UER7 740 aaPredicted RBP12.51□□□□□ -0.41
GINS4-202ENST00000518430 DNMT1P26358 1616 aaKnown RBP12.51□□□□□ -0.41
GINS4-202ENST00000518430 PPM1GO15355 546 aaPredicted RBP12.5□□□□□ -0.41
GINS4-202ENST00000518430 CHIC2Q9UKJ5 165 aa12.5□□□□□ -0.41
GINS4-202ENST00000518430 SPAG9O60271 1321 aaKnown RBP12.5□□□□□ -0.41
GINS4-202ENST00000518430 RTEL1-TNFRSF6BF6WH68 1400 aa12.5□□□□□ -0.41
GINS4-202ENST00000518430 DENND4BO75064 1496 aaPredicted RBP12.5□□□□□ -0.41
GINS4-202ENST00000518430 ZNF518AQ6AHZ1 1483 aa12.5□□□□□ -0.41
GINS4-202ENST00000518430 SYCP2Q9BX26 1530 aa12.5□□□□□ -0.41
GINS4-202ENST00000518430 C9orf84Q5VXU9 1444 aa12.49□□□□□ -0.41
GINS4-202ENST00000518430 WASHC2CQ9Y4E1 1318 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms