RNA–Protein interactions for RNA: ENST00000518247.5

ERGIC1-203, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 4

Gene ERGIC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-203ENST00000518247 PREX2Q70Z35 1606 aa18.05■□□□□ 0.48
ERGIC1-203ENST00000518247 CDC42BPBQ9Y5S2 1711 aa18.05■□□□□ 0.48
ERGIC1-203ENST00000518247 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
ERGIC1-203ENST00000518247 ARID4BQ4LE39 1312 aaPredicted RBP18.04■□□□□ 0.48
ERGIC1-203ENST00000518247 ARHGEF40Q8TER5 1519 aa18.03■□□□□ 0.48
ERGIC1-203ENST00000518247 CDC42BPAQ5VT25 1732 aa18.03■□□□□ 0.48
ERGIC1-203ENST00000518247 POGZQ7Z3K3 1410 aa18.02■□□□□ 0.48
ERGIC1-203ENST00000518247 MYT1LQ9UL68 1186 aa18.02■□□□□ 0.48
ERGIC1-203ENST00000518247 ZFYVE16Q7Z3T8 1539 aa18.01■□□□□ 0.47
ERGIC1-203ENST00000518247 ZMYM4Q5VZL5 1548 aa18■□□□□ 0.47
ERGIC1-203ENST00000518247 ZNF777Q9ULD5 760 aaPredicted RBP18■□□□□ 0.47
ERGIC1-203ENST00000518247 EHBP1L1Q8N3D4 1523 aa17.98■□□□□ 0.47
ERGIC1-203ENST00000518247 YEATS2Q9ULM3 1422 aa17.98■□□□□ 0.47
ERGIC1-203ENST00000518247 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
ERGIC1-203ENST00000518247 ZNF518AQ6AHZ1 1483 aa17.96■□□□□ 0.47
ERGIC1-203ENST00000518247 CCNB3Q8WWL7 1395 aa17.96■□□□□ 0.47
ERGIC1-203ENST00000518247 ABCC1P33527 1531 aa17.95■□□□□ 0.46
ERGIC1-203ENST00000518247 ITSN2Q9NZM3 1697 aa17.95■□□□□ 0.46
ERGIC1-203ENST00000518247 MAGI2Q86UL8 1455 aa17.95■□□□□ 0.46
ERGIC1-203ENST00000518247 GPATCH8Q9UKJ3 1502 aaKnown RBP17.93■□□□□ 0.46
ERGIC1-203ENST00000518247 BCORL1Q5H9F3 1711 aa17.93■□□□□ 0.46
ERGIC1-203ENST00000518247 TIAM1Q13009 1591 aa17.93■□□□□ 0.46
ERGIC1-203ENST00000518247 AFAP1Q8N556 730 aa17.93■□□□□ 0.46
ERGIC1-203ENST00000518247 HECW2Q9P2P5 1572 aa17.92■□□□□ 0.46
ERGIC1-203ENST00000518247 CFDP1Q9UEE9 299 aaPredicted RBP17.92■□□□□ 0.46
ERGIC1-203ENST00000518247 SAMD9LQ8IVG5 1584 aa17.91■□□□□ 0.46
ERGIC1-203ENST00000518247 SUPT6HQ7KZ85 1726 aaKnown RBP17.91■□□□□ 0.46
ERGIC1-203ENST00000518247 SYCP2Q9BX26 1530 aa17.9■□□□□ 0.46
ERGIC1-203ENST00000518247 MLECQ14165 292 aa17.9■□□□□ 0.46
ERGIC1-203ENST00000518247 KDM5CP41229 1560 aa17.9■□□□□ 0.46
ERGIC1-203ENST00000518247 MADDQ8WXG6 1647 aa17.9■□□□□ 0.46
ERGIC1-203ENST00000518247 ADAMTSL3P82987 1691 aa17.9■□□□□ 0.46
ERGIC1-203ENST00000518247 TRAPPC8Q9Y2L5 1435 aa17.89■□□□□ 0.46
ERGIC1-203ENST00000518247 SIGLEC1Q9BZZ2 1709 aa17.89■□□□□ 0.46
ERGIC1-203ENST00000518247 ARHGEF12Q9NZN5 1544 aa17.89■□□□□ 0.45
ERGIC1-203ENST00000518247 ATP10AO60312 1499 aa17.88■□□□□ 0.45
ERGIC1-203ENST00000518247 RIMS1Q86UR5 1692 aaKnown RBP17.87■□□□□ 0.45
ERGIC1-203ENST00000518247 C9orf84Q5VXU9 1444 aa17.87■□□□□ 0.45
ERGIC1-203ENST00000518247 HNRNPMP52272 730 aaKnown RBP eCLIP17.86■□□□□ 0.45
ERGIC1-203ENST00000518247 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
ERGIC1-203ENST00000518247 APLP2Q06481 763 aa17.85■□□□□ 0.45
ERGIC1-203ENST00000518247 NCOA2Q15596 1464 aa17.85■□□□□ 0.45
ERGIC1-203ENST00000518247 ABCA6Q8N139 1617 aa17.85■□□□□ 0.45
ERGIC1-203ENST00000518247 DIP2CQ9Y2E4 1556 aa17.85■□□□□ 0.45
ERGIC1-203ENST00000518247 PTPRMP28827 1452 aa17.84■□□□□ 0.45
ERGIC1-203ENST00000518247 PLEKHH2Q8IVE3 1493 aa17.84■□□□□ 0.45
ERGIC1-203ENST00000518247 LRRC9Q6ZRR7 1453 aa17.83■□□□□ 0.45
ERGIC1-203ENST00000518247 FER1L4A9Z1Z3 1794 aa17.83■□□□□ 0.44
ERGIC1-203ENST00000518247 MLH3Q9UHC1 1453 aa17.82■□□□□ 0.44
ERGIC1-203ENST00000518247 KIDINS220Q9ULH0 1771 aa17.81■□□□□ 0.44
ERGIC1-203ENST00000518247 ZNF644Q9H582 1327 aaPredicted RBP17.81■□□□□ 0.44
ERGIC1-203ENST00000518247 SPAG9O60271 1321 aaKnown RBP17.8■□□□□ 0.44
ERGIC1-203ENST00000518247 KANK4Q5T7N3 995 aaPredicted RBP17.79■□□□□ 0.44
ERGIC1-203ENST00000518247 KIAA1107Q9UPP5 1409 aa17.78■□□□□ 0.44
ERGIC1-203ENST00000518247 ATP7AQ04656 1500 aa17.77■□□□□ 0.44
ERGIC1-203ENST00000518247 MAP3K1Q13233 1512 aa17.77■□□□□ 0.44
ERGIC1-203ENST00000518247 CAMSAP2Q08AD1 1489 aa17.76■□□□□ 0.43
ERGIC1-203ENST00000518247 REREQ9P2R6 1566 aa17.75■□□□□ 0.43
ERGIC1-203ENST00000518247 INO80Q9ULG1 1556 aaPredicted RBP17.75■□□□□ 0.43
ERGIC1-203ENST00000518247 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
ERGIC1-203ENST00000518247 CCDC141Q6ZP82 1450 aa17.71■□□□□ 0.43
ERGIC1-203ENST00000518247 MBD5Q9P267 1494 aa17.7■□□□□ 0.42
ERGIC1-203ENST00000518247 AGLP35573 1532 aa17.69■□□□□ 0.42
ERGIC1-203ENST00000518247 ADGBQ8N7X0 1667 aa17.69■□□□□ 0.42
ERGIC1-203ENST00000518247 MYOM3Q5VTT5 1437 aa17.69■□□□□ 0.42
ERGIC1-203ENST00000518247 A2MP01023 1474 aa17.68■□□□□ 0.42
ERGIC1-203ENST00000518247 CEBPAP49715 358 aaPredicted RBP17.66■□□□□ 0.42
ERGIC1-203ENST00000518247 ARHGEF5Q12774 1597 aa17.65■□□□□ 0.42
ERGIC1-203ENST00000518247 TSPY4P0CV99 314 aa17.64■□□□□ 0.41
ERGIC1-203ENST00000518247 TSPY10P0CW01 314 aa17.64■□□□□ 0.41
ERGIC1-203ENST00000518247 PLXNC1O60486 1568 aa17.64■□□□□ 0.41
ERGIC1-203ENST00000518247 RTEL1-TNFRSF6BF6WH68 1400 aa17.63■□□□□ 0.41
ERGIC1-203ENST00000518247 MIA2Q96PC5 1412 aa17.63■□□□□ 0.41
ERGIC1-203ENST00000518247 LMTK3Q96Q04 1460 aa17.63■□□□□ 0.41
ERGIC1-203ENST00000518247 C3P01024 1663 aa17.62■□□□□ 0.41
ERGIC1-203ENST00000518247 RSPH4AQ5TD94 716 aa17.62■□□□□ 0.41
ERGIC1-203ENST00000518247 GGT6Q6P531 493 aa17.62■□□□□ 0.41
ERGIC1-203ENST00000518247 PTPN23Q9H3S7 1636 aa17.61■□□□□ 0.41
ERGIC1-203ENST00000518247 CLTCQ00610 1675 aaKnown RBP17.6■□□□□ 0.41
ERGIC1-203ENST00000518247 PREX1Q8TCU6 1659 aa17.6■□□□□ 0.41
ERGIC1-203ENST00000518247 CNTLNQ9NXG0 1405 aa17.58■□□□□ 0.41
ERGIC1-203ENST00000518247 HSPA2P54652 639 aa17.58■□□□□ 0.4
ERGIC1-203ENST00000518247 FGD6Q6ZV73 1430 aa17.56■□□□□ 0.4
ERGIC1-203ENST00000518247 DHX29Q7Z478 1369 aaKnown RBP17.56■□□□□ 0.4
ERGIC1-203ENST00000518247 MROH2AA6NES4 1674 aa17.56■□□□□ 0.4
ERGIC1-203ENST00000518247 KIF3BO15066 747 aa17.56■□□□□ 0.4
ERGIC1-203ENST00000518247 MAST1Q9Y2H9 1570 aa17.55■□□□□ 0.4
ERGIC1-203ENST00000518247 CROCC2H7BZ55 1655 aa17.55■□□□□ 0.4
ERGIC1-203ENST00000518247 UHRF1BP1Q6BDS2 1440 aa17.54■□□□□ 0.4
ERGIC1-203ENST00000518247 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
ERGIC1-203ENST00000518247 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
ERGIC1-203ENST00000518247 ZMYM3Q14202 1370 aa17.52■□□□□ 0.39
ERGIC1-203ENST00000518247 DNMT1P26358 1616 aaKnown RBP17.5■□□□□ 0.39
ERGIC1-203ENST00000518247 DAPK1P53355 1430 aa17.5■□□□□ 0.39
ERGIC1-203ENST00000518247 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
ERGIC1-203ENST00000518247 ABCC5O15440 1437 aa17.48■□□□□ 0.39
ERGIC1-203ENST00000518247 CHIC2Q9UKJ5 165 aa17.48■□□□□ 0.39
ERGIC1-203ENST00000518247 SHANK2Q9UPX8 1470 aa17.48■□□□□ 0.39
ERGIC1-203ENST00000518247 SETD1BQ9UPS6 1966 aaKnown RBP17.48■□□□□ 0.39
ERGIC1-203ENST00000518247 KDM5DQ9BY66 1539 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms