RNA–Protein interactions for RNA: ENST00000518170.1

EFCAB13-205, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 355 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-205ENST00000518170 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.06□□□□□ -0.32
EFCAB13-205ENST00000518170 BOLA1Q9Y3E2 137 aa13.05□□□□□ -0.32
EFCAB13-205ENST00000518170 C3orf67Q6ZVT6 689 aa13.04□□□□□ -0.32
EFCAB13-205ENST00000518170 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
EFCAB13-205ENST00000518170 RYDENQ9NUL5 291 aaKnown RBP13□□□□□ -0.33
EFCAB13-205ENST00000518170 PPP1R37O75864 691 aa12.98□□□□□ -0.33
EFCAB13-205ENST00000518170 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
EFCAB13-205ENST00000518170 MICALL2Q8IY33 904 aa12.97□□□□□ -0.33
EFCAB13-205ENST00000518170 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
EFCAB13-205ENST00000518170 GTPBP6O43824 516 aaPredicted RBP12.96□□□□□ -0.33
EFCAB13-205ENST00000518170 ACIN1Q9UKV3 1341 aaKnown RBP12.95□□□□□ -0.34
EFCAB13-205ENST00000518170 TMEM121BQ9BXQ6 578 aaPredicted RBP12.95□□□□□ -0.34
EFCAB13-205ENST00000518170 POTEMA6NI47 508 aa12.93□□□□□ -0.34
EFCAB13-205ENST00000518170 RB1CC1Q8TDY2 1594 aa12.91□□□□□ -0.34
EFCAB13-205ENST00000518170 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
EFCAB13-205ENST00000518170 SNPHO15079 494 aa12.89□□□□□ -0.35
EFCAB13-205ENST00000518170 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
EFCAB13-205ENST00000518170 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
EFCAB13-205ENST00000518170 LCE2DQ5TA82 110 aaPredicted RBP12.88□□□□□ -0.35
EFCAB13-205ENST00000518170 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
EFCAB13-205ENST00000518170 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
EFCAB13-205ENST00000518170 RSF1Q96T23 1441 aaPredicted RBP12.86□□□□□ -0.35
EFCAB13-205ENST00000518170 ST18O60284 1047 aa12.81□□□□□ -0.36
EFCAB13-205ENST00000518170 TMEM92Q6UXU6 159 aa12.81□□□□□ -0.36
EFCAB13-205ENST00000518170 NEUROD1Q13562 356 aa12.79□□□□□ -0.36
EFCAB13-205ENST00000518170 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
EFCAB13-205ENST00000518170 PCDH10Q9P2E7 1040 aa12.75□□□□□ -0.37
EFCAB13-205ENST00000518170 C2orf72A6NCS6 295 aa12.74□□□□□ -0.37
EFCAB13-205ENST00000518170 GTF3C3Q9Y5Q9 886 aa12.72□□□□□ -0.37
EFCAB13-205ENST00000518170 KIF3CO14782 793 aa12.7□□□□□ -0.38
EFCAB13-205ENST00000518170 DIEXFQ68CQ4 756 aaKnown RBP12.7□□□□□ -0.38
EFCAB13-205ENST00000518170 WRNQ14191 1432 aaPredicted RBP eCLIP12.7□□□□□ -0.38
EFCAB13-205ENST00000518170 PDE4AP27815 886 aa12.67□□□□□ -0.38
EFCAB13-205ENST00000518170 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
EFCAB13-205ENST00000518170 CCER1Q8TC90 406 aaPredicted RBP12.67□□□□□ -0.38
EFCAB13-205ENST00000518170 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
EFCAB13-205ENST00000518170 DOK7Q18PE1 504 aa12.66□□□□□ -0.38
EFCAB13-205ENST00000518170 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
EFCAB13-205ENST00000518170 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
EFCAB13-205ENST00000518170 CRISPLD2Q9H0B8 497 aa12.64□□□□□ -0.39
EFCAB13-205ENST00000518170 EIF4G1Q04637 1599 aaKnown RBP12.64□□□□□ -0.39
EFCAB13-205ENST00000518170 NCKAP5LQ9HCH0 1330 aa12.63□□□□□ -0.39
EFCAB13-205ENST00000518170 HOXB3P14651 431 aaPredicted RBP12.63□□□□□ -0.39
EFCAB13-205ENST00000518170 MARVELD3Q96A59 401 aa12.63□□□□□ -0.39
EFCAB13-205ENST00000518170 LARP6Q9BRS8 491 aaKnown RBP12.63□□□□□ -0.39
EFCAB13-205ENST00000518170 RIMBP2O15034 1052 aa12.62□□□□□ -0.39
EFCAB13-205ENST00000518170 PLCB2Q00722 1185 aa12.62□□□□□ -0.39
EFCAB13-205ENST00000518170 FOXK1P85037 733 aa12.61□□□□□ -0.39
EFCAB13-205ENST00000518170 DSG2Q14126 1118 aa12.61□□□□□ -0.39
EFCAB13-205ENST00000518170 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
EFCAB13-205ENST00000518170 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
EFCAB13-205ENST00000518170 EMP3P54852 163 aa12.6□□□□□ -0.39
EFCAB13-205ENST00000518170 CDAN1Q8IWY9 1227 aa12.6□□□□□ -0.39
EFCAB13-205ENST00000518170 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
EFCAB13-205ENST00000518170 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
EFCAB13-205ENST00000518170 PPP1R15BQ5SWA1 713 aa12.57□□□□□ -0.4
EFCAB13-205ENST00000518170 CLSPNQ9HAW4 1339 aa12.57□□□□□ -0.4
EFCAB13-205ENST00000518170 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
EFCAB13-205ENST00000518170 DDX27Q96GQ7 796 aaKnown RBP12.56□□□□□ -0.4
EFCAB13-205ENST00000518170 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
EFCAB13-205ENST00000518170 HOXB1P14653 301 aaPredicted RBP12.54□□□□□ -0.4
EFCAB13-205ENST00000518170 ZSWIM6Q9HCJ5 1215 aa12.54□□□□□ -0.4
EFCAB13-205ENST00000518170 TTBK1Q5TCY1 1321 aaPredicted RBP12.53□□□□□ -0.4
EFCAB13-205ENST00000518170 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
EFCAB13-205ENST00000518170 MFSD10Q14728 455 aa12.51□□□□□ -0.41
EFCAB13-205ENST00000518170 EEA1Q15075 1411 aa12.49□□□□□ -0.41
EFCAB13-205ENST00000518170 SLC34A2O95436 690 aa12.49□□□□□ -0.41
EFCAB13-205ENST00000518170 HAP1P54257 671 aaPredicted RBP12.49□□□□□ -0.41
EFCAB13-205ENST00000518170 ARSIQ5FYB1 569 aa12.49□□□□□ -0.41
EFCAB13-205ENST00000518170 HS3ST6Q96QI5 342 aa12.49□□□□□ -0.41
EFCAB13-205ENST00000518170 MROH2BQ7Z745 1585 aa12.48□□□□□ -0.41
EFCAB13-205ENST00000518170 WDR70Q9NW82 654 aa12.48□□□□□ -0.41
EFCAB13-205ENST00000518170 GPR153Q6NV75 609 aa12.47□□□□□ -0.41
EFCAB13-205ENST00000518170 NACADO15069 1562 aa12.47□□□□□ -0.41
EFCAB13-205ENST00000518170 TNIKQ9UKE5 1360 aa12.46□□□□□ -0.41
EFCAB13-205ENST00000518170 UPF1Q92900 1129 aaKnown RBP eCLIP12.46□□□□□ -0.41
EFCAB13-205ENST00000518170 KHSRPQ92945 711 aaKnown RBP eCLIP12.46□□□□□ -0.41
EFCAB13-205ENST00000518170 PCDHGA4Q9Y5G9 962 aa12.46□□□□□ -0.41
EFCAB13-205ENST00000518170 CEP162Q5TB80 1403 aa12.45□□□□□ -0.42
EFCAB13-205ENST00000518170 ERBB3P21860 1342 aa12.45□□□□□ -0.42
EFCAB13-205ENST00000518170 WIZO95785 1651 aa12.45□□□□□ -0.42
EFCAB13-205ENST00000518170 TBC1D12O60347 775 aa12.44□□□□□ -0.42
EFCAB13-205ENST00000518170 PTCD2Q8WV60 388 aaKnown RBP12.44□□□□□ -0.42
EFCAB13-205ENST00000518170 NUDT7P0C024 238 aa12.41□□□□□ -0.42
EFCAB13-205ENST00000518170 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.42
EFCAB13-205ENST00000518170 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
EFCAB13-205ENST00000518170 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
EFCAB13-205ENST00000518170 OXER1Q8TDS5 423 aa12.4□□□□□ -0.42
EFCAB13-205ENST00000518170 TOP2AP11388 1531 aaKnown RBP12.38□□□□□ -0.43
EFCAB13-205ENST00000518170 EMILIN3Q9NT22 766 aa12.38□□□□□ -0.43
EFCAB13-205ENST00000518170 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
EFCAB13-205ENST00000518170 VARS2Q5ST30 1063 aaKnown RBP12.37□□□□□ -0.43
EFCAB13-205ENST00000518170 CAMK2BQ13554 666 aa12.36□□□□□ -0.43
EFCAB13-205ENST00000518170 E2F4Q16254 413 aa12.36□□□□□ -0.43
EFCAB13-205ENST00000518170 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
EFCAB13-205ENST00000518170 KRTAP3-3Q9BYR6 98 aa12.31□□□□□ -0.44
EFCAB13-205ENST00000518170 KRTAP3-2Q9BYR7 98 aa12.31□□□□□ -0.44
EFCAB13-205ENST00000518170 LHX6Q9UPM6 363 aa12.31□□□□□ -0.44
EFCAB13-205ENST00000518170 DPYSL4O14531 572 aa12.3□□□□□ -0.44
EFCAB13-205ENST00000518170 KIF21BO75037 1637 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 540.4 ms