RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 SCUBE2Q9NQ36 999 aa10.91□□□□□ -0.66
PABPC1-204ENST00000517990 MMRN1Q13201 1228 aa10.9□□□□□ -0.66
PABPC1-204ENST00000517990 PLB1Q6P1J6 1458 aa10.89□□□□□ -0.67
PABPC1-204ENST00000517990 TTBK1Q5TCY1 1321 aaPredicted RBP10.88□□□□□ -0.67
PABPC1-204ENST00000517990 IGF1RP08069 1367 aa10.88□□□□□ -0.67
PABPC1-204ENST00000517990 TNIKQ9UKE5 1360 aa10.88□□□□□ -0.67
PABPC1-204ENST00000517990 ILDR1Q86SU0 546 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-204ENST00000517990 ABCC2Q92887 1545 aa10.87□□□□□ -0.67
PABPC1-204ENST00000517990 GLI2P10070 1586 aa10.86□□□□□ -0.67
PABPC1-204ENST00000517990 ASXL2Q76L83 1435 aa10.85□□□□□ -0.67
PABPC1-204ENST00000517990 C7P10643 843 aa10.85□□□□□ -0.67
PABPC1-204ENST00000517990 SLC39A7Q92504 469 aa10.85□□□□□ -0.67
PABPC1-204ENST00000517990 CARMIL1Q5VZK9 1371 aa10.84□□□□□ -0.67
PABPC1-204ENST00000517990 TEX14Q8IWB6 1497 aa10.84□□□□□ -0.67
PABPC1-204ENST00000517990 ADGRL1O94910 1474 aa10.83□□□□□ -0.68
PABPC1-204ENST00000517990 IQGAP2Q13576 1575 aa10.82□□□□□ -0.68
PABPC1-204ENST00000517990 UHRF1BP1LA0JNW5 1464 aa10.82□□□□□ -0.68
PABPC1-204ENST00000517990 UACAQ9BZF9 1416 aa10.82□□□□□ -0.68
PABPC1-204ENST00000517990 SPNS2Q8IVW8 549 aa10.8□□□□□ -0.68
PABPC1-204ENST00000517990 PPRC1Q5VV67 1664 aaKnown RBP10.79□□□□□ -0.68
PABPC1-204ENST00000517990 FOXD4L1Q9NU39 408 aa10.79□□□□□ -0.68
PABPC1-204ENST00000517990 MKRN4PQ13434 485 aaPredicted RBP10.78□□□□□ -0.68
PABPC1-204ENST00000517990 PHF12Q96QT6 1004 aa10.78□□□□□ -0.68
PABPC1-204ENST00000517990 EPRSP07814 1512 aaKnown RBP10.78□□□□□ -0.68
PABPC1-204ENST00000517990 MAP3K4Q9Y6R4 1608 aa10.76□□□□□ -0.69
PABPC1-204ENST00000517990 KDM5BQ9UGL1 1544 aa10.76□□□□□ -0.69
PABPC1-204ENST00000517990 ASTLQ6HA08 431 aaPredicted RBP10.76□□□□□ -0.69
PABPC1-204ENST00000517990 HECW2Q9P2P5 1572 aa10.76□□□□□ -0.69
PABPC1-204ENST00000517990 FAM9AQ8IZU1 332 aaPredicted RBP10.74□□□□□ -0.69
PABPC1-204ENST00000517990 DISP1Q96F81 1524 aa10.74□□□□□ -0.69
PABPC1-204ENST00000517990 ZCCHC11Q5TAX3 1644 aaKnown RBP10.73□□□□□ -0.69
PABPC1-204ENST00000517990 UGGT2Q9NYU1 1516 aa10.73□□□□□ -0.69
PABPC1-204ENST00000517990 PAK3O75914 559 aaPredicted RBP10.72□□□□□ -0.69
PABPC1-204ENST00000517990 COL17A1Q9UMD9 1497 aaPredicted RBP10.72□□□□□ -0.69
PABPC1-204ENST00000517990 WDR7Q9Y4E6 1490 aa10.72□□□□□ -0.69
PABPC1-204ENST00000517990 RAPGEF2Q9Y4G8 1499 aa10.72□□□□□ -0.69
PABPC1-204ENST00000517990 ATMINO43313 823 aaPredicted RBP10.71□□□□□ -0.69
PABPC1-204ENST00000517990 KIAA0556O60303 1618 aa10.7□□□□□ -0.7
PABPC1-204ENST00000517990 CD109Q6YHK3 1445 aa10.69□□□□□ -0.7
PABPC1-204ENST00000517990 CFAP43Q8NDM7 1665 aa10.69□□□□□ -0.7
PABPC1-204ENST00000517990 MAGI3Q5TCQ9 1506 aa10.68□□□□□ -0.7
PABPC1-204ENST00000517990 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
PABPC1-204ENST00000517990 KCNH8Q96L42 1107 aa10.68□□□□□ -0.7
PABPC1-204ENST00000517990 FBXO41Q8TF61 875 aa10.65□□□□□ -0.7
PABPC1-204ENST00000517990 CTTNBP2Q8WZ74 1663 aa10.63□□□□□ -0.71
PABPC1-204ENST00000517990 PHLDB1Q86UU1 1377 aa10.63□□□□□ -0.71
PABPC1-204ENST00000517990 KIF21BO75037 1637 aa10.61□□□□□ -0.71
PABPC1-204ENST00000517990 ABCA8O94911 1581 aa10.6□□□□□ -0.71
PABPC1-204ENST00000517990 ARAP3Q8WWN8 1544 aa10.6□□□□□ -0.71
PABPC1-204ENST00000517990 ST18O60284 1047 aa10.6□□□□□ -0.71
PABPC1-204ENST00000517990 MS4A3Q96HJ5 214 aa10.59□□□□□ -0.71
PABPC1-204ENST00000517990 CREBZFQ9NS37 354 aa10.58□□□□□ -0.72
PABPC1-204ENST00000517990 ARID4BQ4LE39 1312 aaPredicted RBP10.57□□□□□ -0.72
PABPC1-204ENST00000517990 PTPRMP28827 1452 aa10.56□□□□□ -0.72
PABPC1-204ENST00000517990 ATXN8OSP0DMR3 200 aa10.56□□□□□ -0.72
PABPC1-204ENST00000517990 POTEFA5A3E0 1075 aa10.54□□□□□ -0.72
PABPC1-204ENST00000517990 NEO1Q92859 1461 aa10.54□□□□□ -0.72
PABPC1-204ENST00000517990 ADAMTSL3P82987 1691 aa10.53□□□□□ -0.72
PABPC1-204ENST00000517990 ARID3CA6NKF2 412 aa10.53□□□□□ -0.72
PABPC1-204ENST00000517990 ATN1P54259 1190 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-204ENST00000517990 ABCA9Q8IUA7 1624 aa10.53□□□□□ -0.72
PABPC1-204ENST00000517990 RAPGEF3O95398 923 aa10.52□□□□□ -0.73
PABPC1-204ENST00000517990 ATP10BO94823 1461 aa10.52□□□□□ -0.73
PABPC1-204ENST00000517990 PCF11O94913 1555 aaKnown RBP10.52□□□□□ -0.73
PABPC1-204ENST00000517990 POGZQ7Z3K3 1410 aa10.5□□□□□ -0.73
PABPC1-204ENST00000517990 BCORL1Q5H9F3 1711 aa10.5□□□□□ -0.73
PABPC1-204ENST00000517990 PRXQ9BXM0 1461 aa10.5□□□□□ -0.73
PABPC1-204ENST00000517990 P3H3Q8IVL6 736 aa10.5□□□□□ -0.73
PABPC1-204ENST00000517990 RAPGEF6Q8TEU7 1601 aa10.47□□□□□ -0.73
PABPC1-204ENST00000517990 MADDQ8WXG6 1647 aa10.47□□□□□ -0.73
PABPC1-204ENST00000517990 DENND4BO75064 1496 aaPredicted RBP10.47□□□□□ -0.73
PABPC1-204ENST00000517990 LMTK3Q96Q04 1460 aa10.47□□□□□ -0.73
PABPC1-204ENST00000517990 CFAP74Q9C0B2 1584 aa10.47□□□□□ -0.73
PABPC1-204ENST00000517990 PLEKHD1A6NEE1 506 aa10.46□□□□□ -0.73
PABPC1-204ENST00000517990 FANCAO15360 1455 aa10.46□□□□□ -0.74
PABPC1-204ENST00000517990 ARHGEF40Q8TER5 1519 aa10.46□□□□□ -0.74
PABPC1-204ENST00000517990 RIMS1Q86UR5 1692 aaKnown RBP10.45□□□□□ -0.74
PABPC1-204ENST00000517990 AKNAQ7Z591 1439 aa10.45□□□□□ -0.74
PABPC1-204ENST00000517990 SAMD9Q5K651 1589 aa10.43□□□□□ -0.74
PABPC1-204ENST00000517990 FRMPD1Q5SYB0 1578 aa10.43□□□□□ -0.74
PABPC1-204ENST00000517990 EFCAB5A4FU69 1503 aa10.43□□□□□ -0.74
PABPC1-204ENST00000517990 SLAIN1Q8ND83 568 aa10.42□□□□□ -0.74
PABPC1-204ENST00000517990 MAGI2Q86UL8 1455 aa10.42□□□□□ -0.74
PABPC1-204ENST00000517990 FHOD3Q2V2M9 1422 aa10.41□□□□□ -0.74
PABPC1-204ENST00000517990 RICTORQ6R327 1708 aa10.41□□□□□ -0.74
PABPC1-204ENST00000517990 CERKQ8TCT0 537 aa10.41□□□□□ -0.74
PABPC1-204ENST00000517990 CSRNP3Q8WYN3 585 aa10.41□□□□□ -0.74
PABPC1-204ENST00000517990 ZFYVE16Q7Z3T8 1539 aa10.4□□□□□ -0.74
PABPC1-204ENST00000517990 HSPA2P54652 639 aa10.4□□□□□ -0.74
PABPC1-204ENST00000517990 NUP153P49790 1475 aaKnown RBP10.4□□□□□ -0.74
PABPC1-204ENST00000517990 ZMYM4Q5VZL5 1548 aa10.39□□□□□ -0.75
PABPC1-204ENST00000517990 RANGAP1P46060 587 aaPredicted RBP10.39□□□□□ -0.75
PABPC1-204ENST00000517990 SEC24BO95487 1268 aa10.38□□□□□ -0.75
PABPC1-204ENST00000517990 MLECQ14165 292 aa10.38□□□□□ -0.75
PABPC1-204ENST00000517990 TMEM121BQ9BXQ6 578 aaPredicted RBP10.38□□□□□ -0.75
PABPC1-204ENST00000517990 FER1L4A9Z1Z3 1794 aa10.38□□□□□ -0.75
PABPC1-204ENST00000517990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.37□□□□□ -0.75
PABPC1-204ENST00000517990 EEA1Q15075 1411 aa10.36□□□□□ -0.75
PABPC1-204ENST00000517990 TTC37Q6PGP7 1564 aa10.35□□□□□ -0.75
PABPC1-204ENST00000517990 COLQQ9Y215 455 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms