RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 MADDQ8WXG6 1647 aa28.18■■■□□ 2.1
CTNNA1-206ENST00000517980 MLECQ14165 292 aa28.18■■■□□ 2.1
CTNNA1-206ENST00000517980 ILDR1Q86SU0 546 aaPredicted RBP28.17■■■□□ 2.1
CTNNA1-206ENST00000517980 ZFYVE16Q7Z3T8 1539 aa28.16■■■□□ 2.1
CTNNA1-206ENST00000517980 ZMYM4Q5VZL5 1548 aa28.15■■■□□ 2.1
CTNNA1-206ENST00000517980 SIGLEC1Q9BZZ2 1709 aa28.15■■■□□ 2.1
CTNNA1-206ENST00000517980 CLIP1P30622 1438 aa28.14■■■□□ 2.1
CTNNA1-206ENST00000517980 POGZQ7Z3K3 1410 aa28.14■■■□□ 2.1
CTNNA1-206ENST00000517980 CASKIN1Q8WXD9 1431 aa28.13■■■□□ 2.09
CTNNA1-206ENST00000517980 AFAP1Q8N556 730 aa28.13■■■□□ 2.09
CTNNA1-206ENST00000517980 PCF11O94913 1555 aaKnown RBP28.12■■■□□ 2.09
CTNNA1-206ENST00000517980 RIMS1Q86UR5 1692 aaKnown RBP28.12■■■□□ 2.09
CTNNA1-206ENST00000517980 MAGI2Q86UL8 1455 aa28.11■■■□□ 2.09
CTNNA1-206ENST00000517980 ARHGAP5Q13017 1502 aa28.11■■■□□ 2.09
CTNNA1-206ENST00000517980 MYT1LQ9UL68 1186 aa28.1■■■□□ 2.09
CTNNA1-206ENST00000517980 CDC42BPBQ9Y5S2 1711 aa28.06■■■□□ 2.08
CTNNA1-206ENST00000517980 ATP10AO60312 1499 aa28.04■■■□□ 2.08
CTNNA1-206ENST00000517980 CCDC18Q5T9S5 1454 aa28.04■■■□□ 2.08
CTNNA1-206ENST00000517980 ZNF518AQ6AHZ1 1483 aa27.98■■■□□ 2.07
CTNNA1-206ENST00000517980 FYCO1Q9BQS8 1478 aa27.98■■■□□ 2.07
CTNNA1-206ENST00000517980 ZNF777Q9ULD5 760 aaPredicted RBP27.97■■■□□ 2.07
CTNNA1-206ENST00000517980 C9orf84Q5VXU9 1444 aa27.97■■■□□ 2.07
CTNNA1-206ENST00000517980 HSPA2P54652 639 aa27.96■■■□□ 2.07
CTNNA1-206ENST00000517980 ARHGEF12Q9NZN5 1544 aa27.95■■■□□ 2.06
CTNNA1-206ENST00000517980 TRAPPC8Q9Y2L5 1435 aa27.94■■■□□ 2.06
CTNNA1-206ENST00000517980 FER1L4A9Z1Z3 1794 aa27.94■■■□□ 2.06
CTNNA1-206ENST00000517980 PREX2Q70Z35 1606 aa27.94■■■□□ 2.06
CTNNA1-206ENST00000517980 CDC42BPAQ5VT25 1732 aa27.94■■■□□ 2.06
CTNNA1-206ENST00000517980 LMTK3Q96Q04 1460 aa27.94■■■□□ 2.06
CTNNA1-206ENST00000517980 CEBPAP49715 358 aaPredicted RBP27.93■■■□□ 2.06
CTNNA1-206ENST00000517980 KDM5CP41229 1560 aa27.91■■■□□ 2.06
CTNNA1-206ENST00000517980 HNRNPMP52272 730 aaKnown RBP eCLIP27.88■■■□□ 2.057e-14■■■■■ 45.2
CTNNA1-206ENST00000517980 ABCC1P33527 1531 aa27.87■■■□□ 2.05
CTNNA1-206ENST00000517980 ITSN2Q9NZM3 1697 aa27.86■■■□□ 2.05
CTNNA1-206ENST00000517980 DIP2CQ9Y2E4 1556 aa27.86■■■□□ 2.05
CTNNA1-206ENST00000517980 MLH3Q9UHC1 1453 aa27.85■■■□□ 2.05
CTNNA1-206ENST00000517980 GPATCH8Q9UKJ3 1502 aaKnown RBP27.84■■■□□ 2.05
CTNNA1-206ENST00000517980 ABCA6Q8N139 1617 aa27.83■■■□□ 2.05
CTNNA1-206ENST00000517980 CFDP1Q9UEE9 299 aaPredicted RBP27.81■■■□□ 2.04
CTNNA1-206ENST00000517980 MTUS2Q5JR59 1369 aa27.81■■■□□ 2.04
CTNNA1-206ENST00000517980 KIDINS220Q9ULH0 1771 aa27.79■■■□□ 2.04
CTNNA1-206ENST00000517980 SAMD9LQ8IVG5 1584 aa27.79■■■□□ 2.04
CTNNA1-206ENST00000517980 LOC105371045A0A1W2PR82 267 aa27.79■■■□□ 2.04
CTNNA1-206ENST00000517980 CCNB3Q8WWL7 1395 aa27.77■■■□□ 2.04
CTNNA1-206ENST00000517980 CEP162Q5TB80 1403 aa27.76■■■□□ 2.04
CTNNA1-206ENST00000517980 SPAG9O60271 1321 aaKnown RBP27.75■■■□□ 2.03
CTNNA1-206ENST00000517980 SYCP2Q9BX26 1530 aa27.74■■■□□ 2.03
CTNNA1-206ENST00000517980 ESF1Q9H501 851 aaKnown RBP27.74■■■□□ 2.03
CTNNA1-206ENST00000517980 REREQ9P2R6 1566 aa27.73■■■□□ 2.03
CTNNA1-206ENST00000517980 ZNF644Q9H582 1327 aaPredicted RBP27.72■■■□□ 2.03
CTNNA1-206ENST00000517980 SETD1BQ9UPS6 1966 aaKnown RBP27.71■■■□□ 2.03
CTNNA1-206ENST00000517980 FBXO41Q8TF61 875 aa27.71■■■□□ 2.03
CTNNA1-206ENST00000517980 AGLP35573 1532 aa27.68■■■□□ 2.02
CTNNA1-206ENST00000517980 PREX1Q8TCU6 1659 aa27.67■■■□□ 2.02
CTNNA1-206ENST00000517980 KIAA1107Q9UPP5 1409 aa27.66■■■□□ 2.02
CTNNA1-206ENST00000517980 C3P01024 1663 aa27.65■■■□□ 2.02
CTNNA1-206ENST00000517980 SUPT6HQ7KZ85 1726 aaKnown RBP27.65■■■□□ 2.02
CTNNA1-206ENST00000517980 PLEKHH2Q8IVE3 1493 aa27.63■■■□□ 2.01
CTNNA1-206ENST00000517980 TIAM1Q13009 1591 aa27.61■■■□□ 2.01
CTNNA1-206ENST00000517980 ATP7AQ04656 1500 aa27.6■■■□□ 2.01
CTNNA1-206ENST00000517980 EHBP1L1Q8N3D4 1523 aa27.6■■■□□ 2.01
CTNNA1-206ENST00000517980 UHRF1BP1Q6BDS2 1440 aa27.59■■■□□ 2.01
CTNNA1-206ENST00000517980 GGT6Q6P531 493 aa27.58■■■□□ 2.01
CTNNA1-206ENST00000517980 A2MP01023 1474 aa27.55■■■□□ 2
CTNNA1-206ENST00000517980 STRCQ7RTU9 1775 aa27.55■■■□□ 2
CTNNA1-206ENST00000517980 ZMYM3Q14202 1370 aa27.54■■■□□ 2
CTNNA1-206ENST00000517980 INO80Q9ULG1 1556 aaPredicted RBP27.54■■■□□ 2
CTNNA1-206ENST00000517980 MBD5Q9P267 1494 aa27.53■■■□□ 2
CTNNA1-206ENST00000517980 CNTLNQ9NXG0 1405 aa27.53■■■□□ 2
CTNNA1-206ENST00000517980 CERKQ8TCT0 537 aa27.53■■■□□ 2
CTNNA1-206ENST00000517980 NCOA2Q15596 1464 aa27.51■■■□□ 2
CTNNA1-206ENST00000517980 DMRT2Q9Y5R5 561 aa27.49■■□□□ 1.99
CTNNA1-206ENST00000517980 CLTCQ00610 1675 aaKnown RBP27.47■■□□□ 1.99
CTNNA1-206ENST00000517980 PLXNC1O60486 1568 aa27.46■■□□□ 1.99
CTNNA1-206ENST00000517980 ADGBQ8N7X0 1667 aa27.45■■□□□ 1.98
CTNNA1-206ENST00000517980 VPS8Q8N3P4 1428 aa27.44■■□□□ 1.98
CTNNA1-206ENST00000517980 KANK4Q5T7N3 995 aaPredicted RBP27.44■■□□□ 1.98
CTNNA1-206ENST00000517980 MROH2AA6NES4 1674 aa27.43■■□□□ 1.98
CTNNA1-206ENST00000517980 CAMSAP2Q08AD1 1489 aa27.42■■□□□ 1.98
CTNNA1-206ENST00000517980 RTEL1-TNFRSF6BF6WH68 1400 aa27.41■■□□□ 1.98
CTNNA1-206ENST00000517980 DHX29Q7Z478 1369 aaKnown RBP27.41■■□□□ 1.98
CTNNA1-206ENST00000517980 KIF3BO15066 747 aa27.4■■□□□ 1.98
CTNNA1-206ENST00000517980 LRRC9Q6ZRR7 1453 aa27.39■■□□□ 1.98
CTNNA1-206ENST00000517980 RSPH4AQ5TD94 716 aa27.39■■□□□ 1.98
CTNNA1-206ENST00000517980 NPATQ14207 1427 aa27.38■■□□□ 1.97
CTNNA1-206ENST00000517980 PPP6R1Q9UPN7 881 aa27.37■■□□□ 1.97
CTNNA1-206ENST00000517980 CCDC141Q6ZP82 1450 aa27.37■■□□□ 1.97
CTNNA1-206ENST00000517980 TSPY4P0CV99 314 aa27.36■■□□□ 1.97
CTNNA1-206ENST00000517980 TSPY10P0CW01 314 aa27.36■■□□□ 1.97
CTNNA1-206ENST00000517980 NCKAP5LQ9HCH0 1330 aa27.36■■□□□ 1.97
CTNNA1-206ENST00000517980 PTPRKQ15262 1439 aa27.34■■□□□ 1.97
CTNNA1-206ENST00000517980 PTPRTO14522 1441 aa27.33■■□□□ 1.97
CTNNA1-206ENST00000517980 CAMSAP1Q5T5Y3 1602 aa27.32■■□□□ 1.96
CTNNA1-206ENST00000517980 NCOA1Q15788 1441 aa27.32■■□□□ 1.96
CTNNA1-206ENST00000517980 FBXO31Q5XUX0 539 aaPredicted RBP27.3■■□□□ 1.96
CTNNA1-206ENST00000517980 ARHGEF5Q12774 1597 aa27.26■■□□□ 1.96
CTNNA1-206ENST00000517980 WASHC2CQ9Y4E1 1318 aa27.26■■□□□ 1.95
CTNNA1-206ENST00000517980 MYO3AQ8NEV4 1616 aa27.24■■□□□ 1.95
CTNNA1-206ENST00000517980 MAP3K1Q13233 1512 aa27.24■■□□□ 1.95
CTNNA1-206ENST00000517980 APLP2Q06481 763 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms