RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ZNF316A6NFI3 1004 aaPredicted RBP5.16□□□□□ -1.58
SKP1-204ENST00000517691 FBXO3Q9UK99 471 aa5.14□□□□□ -1.59
SKP1-204ENST00000517691 SUZ12Q15022 739 aaKnown RBP5.14□□□□□ -1.59
SKP1-204ENST00000517691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.14□□□□□ -1.595e-9■■■□□ 14.6
SKP1-204ENST00000517691 GOLGA2Q08379 1002 aa5.13□□□□□ -1.59
SKP1-204ENST00000517691 ADGRD1Q6QNK2 874 aa5.13□□□□□ -1.59
SKP1-204ENST00000517691 SCRIBQ14160 1630 aa5.13□□□□□ -1.59
SKP1-204ENST00000517691 TK2O00142 265 aa5.12□□□□□ -1.59
SKP1-204ENST00000517691 GFRA3O60609 400 aa5.12□□□□□ -1.59
SKP1-204ENST00000517691 BOLA1Q9Y3E2 137 aa5.12□□□□□ -1.59
SKP1-204ENST00000517691 VASPP50552 380 aaPredicted RBP5.11□□□□□ -1.59
SKP1-204ENST00000517691 KCTD12Q96CX2 325 aaKnown RBP5.11□□□□□ -1.59
SKP1-204ENST00000517691 ILDR1Q86SU0 546 aaPredicted RBP5.1□□□□□ -1.59
SKP1-204ENST00000517691 SHROOM4Q9ULL8 1493 aa5.1□□□□□ -1.59
SKP1-204ENST00000517691 PRKCSHP14314 528 aaPredicted RBP5.09□□□□□ -1.59
SKP1-204ENST00000517691 IFNLR1Q8IU57 520 aaPredicted RBP5.09□□□□□ -1.59
SKP1-204ENST00000517691 NRG2O14511 850 aaPredicted RBP5.09□□□□□ -1.6
SKP1-204ENST00000517691 TREML4Q6UXN2 200 aa5.07□□□□□ -1.6
SKP1-204ENST00000517691 BICRAQ9NZM4 1560 aa5.07□□□□□ -1.6
SKP1-204ENST00000517691 HRO43593 1189 aa5.07□□□□□ -1.6
SKP1-204ENST00000517691 UNC13AQ9UPW8 1703 aa5.06□□□□□ -1.6
SKP1-204ENST00000517691 STAC3Q96MF2 364 aa5.06□□□□□ -1.6
SKP1-204ENST00000517691 PKD2Q13563 968 aa5.04□□□□□ -1.6
SKP1-204ENST00000517691 DAXXQ9UER7 740 aaPredicted RBP5.04□□□□□ -1.6
SKP1-204ENST00000517691 PLCB2Q00722 1185 aa5.03□□□□□ -1.6
SKP1-204ENST00000517691 INSM1Q01101 510 aaPredicted RBP5.03□□□□□ -1.6
SKP1-204ENST00000517691 ARSIQ5FYB1 569 aa5.03□□□□□ -1.6
SKP1-204ENST00000517691 POTEEQ6S8J3 1075 aa5.03□□□□□ -1.6
SKP1-204ENST00000517691 ARHGAP33O14559 1287 aa5.02□□□□□ -1.61
SKP1-204ENST00000517691 LCE2AQ5TA79 106 aaPredicted RBP5.02□□□□□ -1.61
SKP1-204ENST00000517691 PTPN5P54829 565 aa5.02□□□□□ -1.61
SKP1-204ENST00000517691 FAM212AQ96EL1 285 aa5.02□□□□□ -1.61
SKP1-204ENST00000517691 AXIN2Q9Y2T1 843 aa5.01□□□□□ -1.61
SKP1-204ENST00000517691 MIER1Q8N108 512 aa4.99□□□□□ -1.61
SKP1-204ENST00000517691 ITGBL1O95965 494 aaPredicted RBP4.97□□□□□ -1.61
SKP1-204ENST00000517691 DPY19L2Q6NUT2 758 aa4.97□□□□□ -1.61
SKP1-204ENST00000517691 ZBTB47Q9UFB7 747 aaPredicted RBP4.97□□□□□ -1.61
SKP1-204ENST00000517691 NUBP1P53384 320 aa4.97□□□□□ -1.61
SKP1-204ENST00000517691 EIF4G1Q04637 1599 aaKnown RBP4.95□□□□□ -1.62
SKP1-204ENST00000517691 SPOCK2Q92563 424 aa4.95□□□□□ -1.62
SKP1-204ENST00000517691 KRTAP4-8Q9BYQ9 185 aa4.95□□□□□ -1.62
SKP1-204ENST00000517691 PSDA5PKW4 1024 aaPredicted RBP4.94□□□□□ -1.62
SKP1-204ENST00000517691 WIPF1O43516 503 aa4.94□□□□□ -1.62
SKP1-204ENST00000517691 PCDHB8Q9UN66 801 aa4.94□□□□□ -1.62
SKP1-204ENST00000517691 CECR2Q9BXF3 1484 aa4.94□□□□□ -1.62
SKP1-204ENST00000517691 HAP1P54257 671 aaPredicted RBP4.94□□□□□ -1.62
SKP1-204ENST00000517691 PLCD3Q8N3E9 789 aa4.94□□□□□ -1.62
SKP1-204ENST00000517691 CC2D2AQ9P2K1 1620 aa4.93□□□□□ -1.62
SKP1-204ENST00000517691 FAM181BA6NEQ2 426 aa4.93□□□□□ -1.62
SKP1-204ENST00000517691 THSD4Q6ZMP0 1018 aa4.93□□□□□ -1.62
SKP1-204ENST00000517691 KLHL34Q8N239 644 aa4.93□□□□□ -1.62
SKP1-204ENST00000517691 TAOK2Q9UL54 1235 aa4.93□□□□□ -1.62
SKP1-204ENST00000517691 ZNF467Q7Z7K2 595 aaPredicted RBP4.92□□□□□ -1.62
SKP1-204ENST00000517691 ANO8Q9HCE9 1232 aaPredicted RBP4.91□□□□□ -1.62
SKP1-204ENST00000517691 ECM2O94769 699 aaPredicted RBP4.9□□□□□ -1.63
SKP1-204ENST00000517691 TIMELESSQ9UNS1 1208 aa4.9□□□□□ -1.63
SKP1-204ENST00000517691 BAZ1AQ9NRL2 1556 aaPredicted RBP4.89□□□□□ -1.63
SKP1-204ENST00000517691 BBXQ8WY36 941 aaPredicted RBP4.89□□□□□ -1.63
SKP1-204ENST00000517691 RGL2O15211 777 aa4.89□□□□□ -1.63
SKP1-204ENST00000517691 VSIG10Q8N0Z9 540 aa4.89□□□□□ -1.63
SKP1-204ENST00000517691 KHSRPQ92945 711 aaKnown RBP eCLIP4.89□□□□□ -1.63
SKP1-204ENST00000517691 LHX6Q9UPM6 363 aa4.88□□□□□ -1.63
SKP1-204ENST00000517691 MROH2BQ7Z745 1585 aa4.88□□□□□ -1.63
SKP1-204ENST00000517691 SMARCA4P51532 1647 aa4.88□□□□□ -1.63
SKP1-204ENST00000517691 BCANQ96GW7 911 aa4.87□□□□□ -1.63
SKP1-204ENST00000517691 KDM2AQ9Y2K7 1162 aa4.87□□□□□ -1.63
SKP1-204ENST00000517691 ATAD2BQ9ULI0 1458 aa4.87□□□□□ -1.63
SKP1-204ENST00000517691 WFS1O76024 890 aa4.87□□□□□ -1.63
SKP1-204ENST00000517691 TPRNQ4KMQ1 711 aa4.86□□□□□ -1.63
SKP1-204ENST00000517691 NCAPD3P42695 1498 aa4.86□□□□□ -1.63
SKP1-204ENST00000517691 TMEM92Q6UXU6 159 aa4.85□□□□□ -1.63
SKP1-204ENST00000517691 SMARCA2P51531 1590 aa4.85□□□□□ -1.63
SKP1-204ENST00000517691 RSF1Q96T23 1441 aaPredicted RBP4.85□□□□□ -1.63
SKP1-204ENST00000517691 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
SKP1-204ENST00000517691 PYGBP11216 843 aa4.85□□□□□ -1.63
SKP1-204ENST00000517691 DMRTA1Q5VZB9 504 aa4.85□□□□□ -1.63
SKP1-204ENST00000517691 PAXIP1Q6ZW49 1069 aaPredicted RBP4.85□□□□□ -1.63
SKP1-204ENST00000517691 ARXQ96QS3 562 aa4.85□□□□□ -1.63
SKP1-204ENST00000517691 BAZ1BQ9UIG0 1483 aaKnown RBP4.84□□□□□ -1.63
SKP1-204ENST00000517691 SUPT5HO00267 1087 aaKnown RBP4.84□□□□□ -1.63
SKP1-204ENST00000517691 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.84□□□□□ -1.63
SKP1-204ENST00000517691 V9GY48 417 aaPredicted RBP4.84□□□□□ -1.63
SKP1-204ENST00000517691 TULP1O00294 542 aaPredicted RBP4.84□□□□□ -1.64
SKP1-204ENST00000517691 KRTAP1-3Q8IUG1 177 aa4.84□□□□□ -1.64
SKP1-204ENST00000517691 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.64
SKP1-204ENST00000517691 NUDT7P0C024 238 aa4.83□□□□□ -1.64
SKP1-204ENST00000517691 PSEN1P49768 467 aa4.83□□□□□ -1.64
SKP1-204ENST00000517691 KCNC4Q03721 635 aa4.83□□□□□ -1.64
SKP1-204ENST00000517691 CFAP44Q96MT7 982 aa4.82□□□□□ -1.64
SKP1-204ENST00000517691 GOLGA8CPA6NN73 597 aa4.82□□□□□ -1.64
SKP1-204ENST00000517691 WIZO95785 1651 aa4.82□□□□□ -1.64
SKP1-204ENST00000517691 KCNH8Q96L42 1107 aa4.82□□□□□ -1.64
SKP1-204ENST00000517691 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
SKP1-204ENST00000517691 TSHZ2Q9NRE2 1034 aa4.81□□□□□ -1.64
SKP1-204ENST00000517691 CIZ1Q9ULV3 898 aaPredicted RBP4.81□□□□□ -1.64
SKP1-204ENST00000517691 PEG3Q9GZU2 1588 aa4.81□□□□□ -1.64
SKP1-204ENST00000517691 HMGXB3Q12766 1538 aa4.81□□□□□ -1.64
SKP1-204ENST00000517691 XP32Q5T750 250 aa4.8□□□□□ -1.64
SKP1-204ENST00000517691 NYAP1Q6ZVC0 841 aa4.8□□□□□ -1.64
SKP1-204ENST00000517691 WNT2BQ93097 391 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms