RNA–Protein interactions for RNA: ENST00000517594.1

MSRA-204, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 4

Gene MSRA, Length 596 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-204ENST00000517594 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
MSRA-204ENST00000517594 TAOK2Q9UL54 1235 aa12.47□□□□□ -0.41
MSRA-204ENST00000517594 DOK7Q18PE1 504 aa12.46□□□□□ -0.41
MSRA-204ENST00000517594 KRTAP3-3Q9BYR6 98 aa12.46□□□□□ -0.41
MSRA-204ENST00000517594 KRTAP3-2Q9BYR7 98 aa12.46□□□□□ -0.41
MSRA-204ENST00000517594 ZNF710Q8N1W2 664 aa12.45□□□□□ -0.42
MSRA-204ENST00000517594 MMRN1Q13201 1228 aa12.42□□□□□ -0.42
MSRA-204ENST00000517594 GPR153Q6NV75 609 aa12.36□□□□□ -0.43
MSRA-204ENST00000517594 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
MSRA-204ENST00000517594 ERBB3P21860 1342 aa12.35□□□□□ -0.43
MSRA-204ENST00000517594 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
MSRA-204ENST00000517594 KIF3CO14782 793 aa12.32□□□□□ -0.44
MSRA-204ENST00000517594 VARS2Q5ST30 1063 aaKnown RBP12.31□□□□□ -0.44
MSRA-204ENST00000517594 C2orf72A6NCS6 295 aa12.3□□□□□ -0.44
MSRA-204ENST00000517594 PPP1R37O75864 691 aa12.3□□□□□ -0.44
MSRA-204ENST00000517594 ARSIQ5FYB1 569 aa12.29□□□□□ -0.44
MSRA-204ENST00000517594 KHSRPQ92945 711 aaKnown RBP eCLIP12.29□□□□□ -0.44
MSRA-204ENST00000517594 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.45
MSRA-204ENST00000517594 ZNF687Q8N1G0 1237 aa12.21□□□□□ -0.45
MSRA-204ENST00000517594 ZNF316A6NFI3 1004 aaPredicted RBP12.17□□□□□ -0.46
MSRA-204ENST00000517594 NUDT7P0C024 238 aa12.15□□□□□ -0.46
MSRA-204ENST00000517594 TMC2Q8TDI7 906 aa12.15□□□□□ -0.46
MSRA-204ENST00000517594 SLC34A2O95436 690 aa12.13□□□□□ -0.47
MSRA-204ENST00000517594 CHGAP10645 457 aaKnown RBP12.13□□□□□ -0.47
MSRA-204ENST00000517594 PCDHGA4Q9Y5G9 962 aa12.13□□□□□ -0.47
MSRA-204ENST00000517594 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
MSRA-204ENST00000517594 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
MSRA-204ENST00000517594 POTEEQ6S8J3 1075 aa12.06□□□□□ -0.48
MSRA-204ENST00000517594 DNAJC5Q9H3Z4 198 aa12.06□□□□□ -0.48
MSRA-204ENST00000517594 FOXK1P85037 733 aa12.04□□□□□ -0.48
MSRA-204ENST00000517594 RNF166Q96A37 237 aaPredicted RBP12.04□□□□□ -0.48
MSRA-204ENST00000517594 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
MSRA-204ENST00000517594 GPHNQ9NQX3 736 aaPredicted RBP12.03□□□□□ -0.48
MSRA-204ENST00000517594 DSG2Q14126 1118 aa12.02□□□□□ -0.49
MSRA-204ENST00000517594 ANKRD13DQ6ZTN6 518 aa12.02□□□□□ -0.49
MSRA-204ENST00000517594 PLPP6Q8IY26 295 aa12.02□□□□□ -0.49
MSRA-204ENST00000517594 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
MSRA-204ENST00000517594 LSM11P83369 360 aaKnown RBP eCLIP12.01□□□□□ -0.49
MSRA-204ENST00000517594 PTCD2Q8WV60 388 aaKnown RBP12.01□□□□□ -0.49
MSRA-204ENST00000517594 AXIN2Q9Y2T1 843 aa12□□□□□ -0.49
MSRA-204ENST00000517594 PBX2P40425 430 aa11.95□□□□□ -0.5
MSRA-204ENST00000517594 PTGER2P43116 358 aa11.93□□□□□ -0.5
MSRA-204ENST00000517594 CRISPLD2Q9H0B8 497 aa11.92□□□□□ -0.5
MSRA-204ENST00000517594 GTPBP6O43824 516 aaPredicted RBP11.9□□□□□ -0.5
MSRA-204ENST00000517594 NCKAP5LQ9HCH0 1330 aa11.89□□□□□ -0.51
MSRA-204ENST00000517594 RYDENQ9NUL5 291 aaKnown RBP11.88□□□□□ -0.51
MSRA-204ENST00000517594 ARHGAP33O14559 1287 aa11.87□□□□□ -0.51
MSRA-204ENST00000517594 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
MSRA-204ENST00000517594 PSDA5PKW4 1024 aaPredicted RBP11.86□□□□□ -0.51
MSRA-204ENST00000517594 PSEN2P49810 448 aa11.85□□□□□ -0.51
MSRA-204ENST00000517594 PPP1R15BQ5SWA1 713 aa11.85□□□□□ -0.51
MSRA-204ENST00000517594 DMRTA1Q5VZB9 504 aa11.85□□□□□ -0.51
MSRA-204ENST00000517594 UPF1Q92900 1129 aaKnown RBP eCLIP11.85□□□□□ -0.51
MSRA-204ENST00000517594 ADGRD1Q6QNK2 874 aa11.84□□□□□ -0.51
MSRA-204ENST00000517594 TBC1D12O60347 775 aa11.83□□□□□ -0.52
MSRA-204ENST00000517594 PPP4R3BQ5MIZ7 849 aa11.8□□□□□ -0.52
MSRA-204ENST00000517594 DCAF8L2P0C7V8 631 aa11.79□□□□□ -0.52
MSRA-204ENST00000517594 PDE4AP27815 886 aa11.78□□□□□ -0.52
MSRA-204ENST00000517594 HRO43593 1189 aa11.77□□□□□ -0.53
MSRA-204ENST00000517594 TK2O00142 265 aa11.75□□□□□ -0.53
MSRA-204ENST00000517594 LARP6Q9BRS8 491 aaKnown RBP11.75□□□□□ -0.53
MSRA-204ENST00000517594 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
MSRA-204ENST00000517594 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
MSRA-204ENST00000517594 MFSD10Q14728 455 aa11.73□□□□□ -0.53
MSRA-204ENST00000517594 ZNF454Q8N9F8 522 aa11.73□□□□□ -0.53
MSRA-204ENST00000517594 DDX27Q96GQ7 796 aaKnown RBP11.72□□□□□ -0.53
MSRA-204ENST00000517594 ANO8Q9HCE9 1232 aaPredicted RBP11.71□□□□□ -0.53
MSRA-204ENST00000517594 FOSBP53539 338 aa11.7□□□□□ -0.54
MSRA-204ENST00000517594 EVI5O60447 810 aa11.69□□□□□ -0.54
MSRA-204ENST00000517594 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
MSRA-204ENST00000517594 BCL2L12Q9HB09 334 aa11.68□□□□□ -0.54
MSRA-204ENST00000517594 VPS9D1Q9Y2B5 631 aa11.67□□□□□ -0.54
MSRA-204ENST00000517594 HCSTQ9UBK5 93 aa11.65□□□□□ -0.54
MSRA-204ENST00000517594 JPH4Q96JJ6 628 aa11.64□□□□□ -0.55
MSRA-204ENST00000517594 KCTD12Q96CX2 325 aaKnown RBP11.63□□□□□ -0.55
MSRA-204ENST00000517594 ADAM33Q9BZ11 813 aa11.63□□□□□ -0.55
MSRA-204ENST00000517594 KCNH8Q96L42 1107 aa11.62□□□□□ -0.55
MSRA-204ENST00000517594 MAP3K9P80192 1104 aa11.61□□□□□ -0.55
MSRA-204ENST00000517594 PTPREP23469 700 aa11.6□□□□□ -0.55
MSRA-204ENST00000517594 ZDHHC16Q969W1 377 aa11.6□□□□□ -0.55
MSRA-204ENST00000517594 SLC4A5Q9BY07 1137 aa11.6□□□□□ -0.55
MSRA-204ENST00000517594 PLA2G2EQ9NZK7 142 aa11.6□□□□□ -0.55
MSRA-204ENST00000517594 ZBED2Q9BTP6 218 aa11.59□□□□□ -0.55
MSRA-204ENST00000517594 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
MSRA-204ENST00000517594 PCDHGA10Q9Y5H3 936 aa11.57□□□□□ -0.56
MSRA-204ENST00000517594 STAC3Q96MF2 364 aa11.56□□□□□ -0.56
MSRA-204ENST00000517594 CAMK2BQ13554 666 aa11.54□□□□□ -0.56
MSRA-204ENST00000517594 BBXQ8WY36 941 aaPredicted RBP11.52□□□□□ -0.57
MSRA-204ENST00000517594 DPYSL4O14531 572 aa11.5□□□□□ -0.57
MSRA-204ENST00000517594 COL9A1P20849 921 aa11.5□□□□□ -0.57
MSRA-204ENST00000517594 PTPN5P54829 565 aa11.5□□□□□ -0.57
MSRA-204ENST00000517594 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
MSRA-204ENST00000517594 PROX2Q3B8N5 592 aa11.48□□□□□ -0.57
MSRA-204ENST00000517594 THSD4Q6ZMP0 1018 aa11.48□□□□□ -0.57
MSRA-204ENST00000517594 PHF14O94880 888 aa11.47□□□□□ -0.57
MSRA-204ENST00000517594 TYW1BQ6NUM6 668 aa11.47□□□□□ -0.57
MSRA-204ENST00000517594 MRPL50Q8N5N7 158 aaKnown RBP11.46□□□□□ -0.57
MSRA-204ENST00000517594 WNT2BQ93097 391 aa11.45□□□□□ -0.58
MSRA-204ENST00000517594 FBXW7Q969H0 707 aa11.44□□□□□ -0.58
MSRA-204ENST00000517594 GOLGA8CPA6NN73 597 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms