RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 ADRA2BP18089 450 aa13.81□□□□□ -0.2
CTNNA1-203ENST00000517534 EFCAB2Q5VUJ9 269 aa13.81□□□□□ -0.2
CTNNA1-203ENST00000517534 CDK11AQ9UQ88 783 aaPredicted RBP13.81□□□□□ -0.2
CTNNA1-203ENST00000517534 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
CTNNA1-203ENST00000517534 LMTK3Q96Q04 1460 aa13.8□□□□□ -0.2
CTNNA1-203ENST00000517534 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
CTNNA1-203ENST00000517534 MLECQ14165 292 aa13.78□□□□□ -0.2
CTNNA1-203ENST00000517534 PPP6R1Q9UPN7 881 aa13.78□□□□□ -0.2
CTNNA1-203ENST00000517534 ZFYVE16Q7Z3T8 1539 aa13.78□□□□□ -0.2
CTNNA1-203ENST00000517534 PCF11O94913 1555 aaKnown RBP13.77□□□□□ -0.21
CTNNA1-203ENST00000517534 TROQ12816 1431 aaPredicted RBP13.77□□□□□ -0.21
CTNNA1-203ENST00000517534 HECW1Q76N89 1606 aa13.77□□□□□ -0.21
CTNNA1-203ENST00000517534 FBXO41Q8TF61 875 aa13.77□□□□□ -0.21
CTNNA1-203ENST00000517534 HSPA2P54652 639 aa13.76□□□□□ -0.21
CTNNA1-203ENST00000517534 AFAP1Q8N556 730 aa13.75□□□□□ -0.21
CTNNA1-203ENST00000517534 SIGLEC1Q9BZZ2 1709 aa13.75□□□□□ -0.21
CTNNA1-203ENST00000517534 ATP10AO60312 1499 aa13.74□□□□□ -0.21
CTNNA1-203ENST00000517534 RIMS1Q86UR5 1692 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-203ENST00000517534 C9orf84Q5VXU9 1444 aa13.72□□□□□ -0.21
CTNNA1-203ENST00000517534 KIF14Q15058 1648 aa13.72□□□□□ -0.21
CTNNA1-203ENST00000517534 CLIP1P30622 1438 aa13.71□□□□□ -0.22
CTNNA1-203ENST00000517534 ARHGEF12Q9NZN5 1544 aa13.7□□□□□ -0.22
CTNNA1-203ENST00000517534 CEBPAP49715 358 aaPredicted RBP13.7□□□□□ -0.22
CTNNA1-203ENST00000517534 CASKIN1Q8WXD9 1431 aa13.7□□□□□ -0.22
CTNNA1-203ENST00000517534 ZNF518AQ6AHZ1 1483 aa13.69□□□□□ -0.22
CTNNA1-203ENST00000517534 ARHGAP5Q13017 1502 aa13.69□□□□□ -0.22
CTNNA1-203ENST00000517534 KDM5CP41229 1560 aa13.67□□□□□ -0.22
CTNNA1-203ENST00000517534 TRAPPC8Q9Y2L5 1435 aa13.67□□□□□ -0.22
CTNNA1-203ENST00000517534 MYO5CQ9NQX4 1742 aa13.67□□□□□ -0.22
CTNNA1-203ENST00000517534 MLH3Q9UHC1 1453 aa13.66□□□□□ -0.22
CTNNA1-203ENST00000517534 MYT1LQ9UL68 1186 aa13.65□□□□□ -0.22
CTNNA1-203ENST00000517534 CCDC18Q5T9S5 1454 aa13.64□□□□□ -0.23
CTNNA1-203ENST00000517534 LRRIQ1Q96JM4 1722 aa13.64□□□□□ -0.23
CTNNA1-203ENST00000517534 DIP2CQ9Y2E4 1556 aa13.62□□□□□ -0.23
CTNNA1-203ENST00000517534 FER1L4A9Z1Z3 1794 aa13.61□□□□□ -0.23
CTNNA1-203ENST00000517534 CERKQ8TCT0 537 aa13.61□□□□□ -0.23
CTNNA1-203ENST00000517534 REREQ9P2R6 1566 aa13.61□□□□□ -0.23
CTNNA1-203ENST00000517534 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
CTNNA1-203ENST00000517534 ABCC1P33527 1531 aa13.6□□□□□ -0.23
CTNNA1-203ENST00000517534 FYCO1Q9BQS8 1478 aa13.6□□□□□ -0.23
CTNNA1-203ENST00000517534 AGLP35573 1532 aa13.59□□□□□ -0.23
CTNNA1-203ENST00000517534 GPATCH8Q9UKJ3 1502 aaKnown RBP13.59□□□□□ -0.23
CTNNA1-203ENST00000517534 PREX2Q70Z35 1606 aa13.58□□□□□ -0.24
CTNNA1-203ENST00000517534 ZNF777Q9ULD5 760 aaPredicted RBP13.58□□□□□ -0.24
CTNNA1-203ENST00000517534 ABCA6Q8N139 1617 aa13.57□□□□□ -0.24
CTNNA1-203ENST00000517534 HNRNPMP52272 730 aaKnown RBP eCLIP13.57□□□□□ -0.243e-6■■■■□ 24.9
CTNNA1-203ENST00000517534 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
CTNNA1-203ENST00000517534 UHRF1BP1Q6BDS2 1440 aa13.56□□□□□ -0.24
CTNNA1-203ENST00000517534 SPAG9O60271 1321 aaKnown RBP13.55□□□□□ -0.24
CTNNA1-203ENST00000517534 ESF1Q9H501 851 aaKnown RBP13.54□□□□□ -0.24
CTNNA1-203ENST00000517534 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
CTNNA1-203ENST00000517534 KIAA1107Q9UPP5 1409 aa13.54□□□□□ -0.24
CTNNA1-203ENST00000517534 SAMD9LQ8IVG5 1584 aa13.54□□□□□ -0.24
CTNNA1-203ENST00000517534 ITSN2Q9NZM3 1697 aa13.53□□□□□ -0.24
CTNNA1-203ENST00000517534 KIDINS220Q9ULH0 1771 aa13.53□□□□□ -0.24
CTNNA1-203ENST00000517534 PREX1Q8TCU6 1659 aa13.53□□□□□ -0.24
CTNNA1-203ENST00000517534 SETD1BQ9UPS6 1966 aaKnown RBP13.52□□□□□ -0.24
CTNNA1-203ENST00000517534 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.25
CTNNA1-203ENST00000517534 CDC42BPAQ5VT25 1732 aa13.52□□□□□ -0.25
CTNNA1-203ENST00000517534 CCNB3Q8WWL7 1395 aa13.51□□□□□ -0.25
CTNNA1-203ENST00000517534 SYCP2Q9BX26 1530 aa13.5□□□□□ -0.25
CTNNA1-203ENST00000517534 PTPRTO14522 1441 aa13.5□□□□□ -0.25
CTNNA1-203ENST00000517534 ZMYM3Q14202 1370 aa13.5□□□□□ -0.25
CTNNA1-203ENST00000517534 MTUS2Q5JR59 1369 aa13.5□□□□□ -0.25
CTNNA1-203ENST00000517534 ZNF644Q9H582 1327 aaPredicted RBP13.5□□□□□ -0.25
CTNNA1-203ENST00000517534 STRCQ7RTU9 1775 aa13.49□□□□□ -0.25
CTNNA1-203ENST00000517534 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
CTNNA1-203ENST00000517534 C3P01024 1663 aa13.48□□□□□ -0.25
CTNNA1-203ENST00000517534 A2MP01023 1474 aa13.47□□□□□ -0.25
CTNNA1-203ENST00000517534 NPATQ14207 1427 aa13.47□□□□□ -0.25
CTNNA1-203ENST00000517534 GGT6Q6P531 493 aa13.46□□□□□ -0.25
CTNNA1-203ENST00000517534 MBD5Q9P267 1494 aa13.46□□□□□ -0.25
CTNNA1-203ENST00000517534 NCOA1Q15788 1441 aa13.46□□□□□ -0.26
CTNNA1-203ENST00000517534 ATP7AQ04656 1500 aa13.45□□□□□ -0.26
CTNNA1-203ENST00000517534 PLXNC1O60486 1568 aa13.45□□□□□ -0.26
CTNNA1-203ENST00000517534 CEP162Q5TB80 1403 aa13.44□□□□□ -0.26
CTNNA1-203ENST00000517534 PTPRKQ15262 1439 aa13.43□□□□□ -0.26
CTNNA1-203ENST00000517534 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
CTNNA1-203ENST00000517534 INO80Q9ULG1 1556 aaPredicted RBP13.42□□□□□ -0.26
CTNNA1-203ENST00000517534 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
CTNNA1-203ENST00000517534 RTEL1-TNFRSF6BF6WH68 1400 aa13.41□□□□□ -0.26
CTNNA1-203ENST00000517534 LTBP4Q8N2S1 1624 aa13.41□□□□□ -0.26
CTNNA1-203ENST00000517534 DHX29Q7Z478 1369 aaKnown RBP13.41□□□□□ -0.26
CTNNA1-203ENST00000517534 EHBP1L1Q8N3D4 1523 aa13.4□□□□□ -0.26
CTNNA1-203ENST00000517534 MROH2AA6NES4 1674 aa13.4□□□□□ -0.26
CTNNA1-203ENST00000517534 SUPT6HQ7KZ85 1726 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-203ENST00000517534 CAMSAP1Q5T5Y3 1602 aa13.39□□□□□ -0.27
CTNNA1-203ENST00000517534 PKD2Q13563 968 aa13.38□□□□□ -0.27
CTNNA1-203ENST00000517534 RSPH4AQ5TD94 716 aa13.38□□□□□ -0.27
CTNNA1-203ENST00000517534 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
CTNNA1-203ENST00000517534 KIF3BO15066 747 aa13.36□□□□□ -0.27
CTNNA1-203ENST00000517534 FBXO31Q5XUX0 539 aaPredicted RBP13.36□□□□□ -0.27
CTNNA1-203ENST00000517534 ZNF335Q9H4Z2 1342 aaPredicted RBP13.36□□□□□ -0.27
CTNNA1-203ENST00000517534 PLA2R1Q13018 1463 aa13.36□□□□□ -0.27
CTNNA1-203ENST00000517534 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
CTNNA1-203ENST00000517534 CLTCQ00610 1675 aaKnown RBP13.35□□□□□ -0.27
CTNNA1-203ENST00000517534 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
CTNNA1-203ENST00000517534 IQSEC2Q5JU85 1478 aa13.35□□□□□ -0.27
CTNNA1-203ENST00000517534 CCDC141Q6ZP82 1450 aa13.34□□□□□ -0.27
CTNNA1-203ENST00000517534 CAMSAP2Q08AD1 1489 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms