RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 NLRP6P59044 892 aa7.96□□□□□ -1.14
SNORA40.15-201ENST00000516884 MFRPQ9BY79 579 aa7.96□□□□□ -1.14
SNORA40.15-201ENST00000516884 ZSWIM6Q9HCJ5 1215 aa7.95□□□□□ -1.14
SNORA40.15-201ENST00000516884 ECM2O94769 699 aaPredicted RBP7.93□□□□□ -1.14
SNORA40.15-201ENST00000516884 RGL2O15211 777 aa7.92□□□□□ -1.14
SNORA40.15-201ENST00000516884 ZNF710Q8N1W2 664 aa7.92□□□□□ -1.14
SNORA40.15-201ENST00000516884 STK24Q9Y6E0 443 aa7.92□□□□□ -1.14
SNORA40.15-201ENST00000516884 STK25O00506 426 aa7.91□□□□□ -1.14
SNORA40.15-201ENST00000516884 RIMBP2O15034 1052 aa7.91□□□□□ -1.14
SNORA40.15-201ENST00000516884 GPR153Q6NV75 609 aa7.91□□□□□ -1.14
SNORA40.15-201ENST00000516884 KIF3CO14782 793 aa7.9□□□□□ -1.14
SNORA40.15-201ENST00000516884 ERBB3P21860 1342 aa7.86□□□□□ -1.15
SNORA40.15-201ENST00000516884 VARS2Q5ST30 1063 aaKnown RBP7.84□□□□□ -1.15
SNORA40.15-201ENST00000516884 C2orf72A6NCS6 295 aa7.83□□□□□ -1.16
SNORA40.15-201ENST00000516884 ZNF687Q8N1G0 1237 aa7.83□□□□□ -1.16
SNORA40.15-201ENST00000516884 SLC34A2O95436 690 aa7.81□□□□□ -1.16
SNORA40.15-201ENST00000516884 ARSIQ5FYB1 569 aa7.81□□□□□ -1.16
SNORA40.15-201ENST00000516884 HS6ST3Q8IZP7 471 aa7.8□□□□□ -1.16
SNORA40.15-201ENST00000516884 PPP1R37O75864 691 aa7.79□□□□□ -1.16
SNORA40.15-201ENST00000516884 ZNF316A6NFI3 1004 aaPredicted RBP7.78□□□□□ -1.16
SNORA40.15-201ENST00000516884 DNAJC5Q9H3Z4 198 aa7.78□□□□□ -1.16
SNORA40.15-201ENST00000516884 KHSRPQ92945 711 aaKnown RBP eCLIP7.77□□□□□ -1.17
SNORA40.15-201ENST00000516884 KDM4FA0A1W2PPD8 638 aa7.74□□□□□ -1.17
SNORA40.15-201ENST00000516884 TMC2Q8TDI7 906 aa7.74□□□□□ -1.17
SNORA40.15-201ENST00000516884 PCDHGA4Q9Y5G9 962 aa7.74□□□□□ -1.17
SNORA40.15-201ENST00000516884 PTGER2P43116 358 aa7.72□□□□□ -1.17
SNORA40.15-201ENST00000516884 NUDT7P0C024 238 aa7.71□□□□□ -1.18
SNORA40.15-201ENST00000516884 PBX2P40425 430 aa7.7□□□□□ -1.18
SNORA40.15-201ENST00000516884 FOXK1P85037 733 aa7.7□□□□□ -1.18
SNORA40.15-201ENST00000516884 POTEEQ6S8J3 1075 aa7.7□□□□□ -1.18
SNORA40.15-201ENST00000516884 PTCD2Q8WV60 388 aaKnown RBP7.7□□□□□ -1.18
SNORA40.15-201ENST00000516884 RNF166Q96A37 237 aaPredicted RBP7.7□□□□□ -1.18
SNORA40.15-201ENST00000516884 MYT1LQ9UL68 1186 aa7.7□□□□□ -1.18
SNORA40.15-201ENST00000516884 LSM11P83369 360 aaKnown RBP eCLIP7.69□□□□□ -1.18
SNORA40.15-201ENST00000516884 NKX1-1Q15270 411 aaPredicted RBP7.69□□□□□ -1.18
SNORA40.15-201ENST00000516884 GPHNQ9NQX3 736 aaPredicted RBP7.69□□□□□ -1.18
SNORA40.15-201ENST00000516884 LHX6Q9UPM6 363 aa7.69□□□□□ -1.18
SNORA40.15-201ENST00000516884 CHGAP10645 457 aaKnown RBP7.65□□□□□ -1.18
SNORA40.15-201ENST00000516884 PLPP6Q8IY26 295 aa7.65□□□□□ -1.18
SNORA40.15-201ENST00000516884 PSDA5PKW4 1024 aaPredicted RBP7.64□□□□□ -1.19
SNORA40.15-201ENST00000516884 DSG2Q14126 1118 aa7.64□□□□□ -1.19
SNORA40.15-201ENST00000516884 CRISPLD2Q9H0B8 497 aa7.63□□□□□ -1.19
SNORA40.15-201ENST00000516884 ANKRD13DQ6ZTN6 518 aa7.62□□□□□ -1.19
SNORA40.15-201ENST00000516884 RYDENQ9NUL5 291 aaKnown RBP7.62□□□□□ -1.19
SNORA40.15-201ENST00000516884 OXER1Q8TDS5 423 aa7.6□□□□□ -1.19
SNORA40.15-201ENST00000516884 AXIN2Q9Y2T1 843 aa7.6□□□□□ -1.19
SNORA40.15-201ENST00000516884 ARHGAP33O14559 1287 aa7.59□□□□□ -1.19
SNORA40.15-201ENST00000516884 TK2O00142 265 aa7.57□□□□□ -1.2
SNORA40.15-201ENST00000516884 GTPBP6O43824 516 aaPredicted RBP7.57□□□□□ -1.2
SNORA40.15-201ENST00000516884 NCKAP5LQ9HCH0 1330 aa7.56□□□□□ -1.2
SNORA40.15-201ENST00000516884 HRO43593 1189 aa7.56□□□□□ -1.2
SNORA40.15-201ENST00000516884 ADGRD1Q6QNK2 874 aa7.56□□□□□ -1.2
SNORA40.15-201ENST00000516884 TBC1D12O60347 775 aa7.55□□□□□ -1.2
SNORA40.15-201ENST00000516884 PPP4R3BQ5MIZ7 849 aa7.54□□□□□ -1.2
SNORA40.15-201ENST00000516884 PPP1R15BQ5SWA1 713 aa7.54□□□□□ -1.2
SNORA40.15-201ENST00000516884 DMRTA1Q5VZB9 504 aa7.54□□□□□ -1.2
SNORA40.15-201ENST00000516884 PSEN2P49810 448 aa7.52□□□□□ -1.21
SNORA40.15-201ENST00000516884 MFSD10Q14728 455 aa7.51□□□□□ -1.21
SNORA40.15-201ENST00000516884 ANO8Q9HCE9 1232 aaPredicted RBP7.51□□□□□ -1.21
SNORA40.15-201ENST00000516884 PDE4AP27815 886 aa7.5□□□□□ -1.21
SNORA40.15-201ENST00000516884 FOSBP53539 338 aa7.49□□□□□ -1.21
SNORA40.15-201ENST00000516884 SLC4A5Q9BY07 1137 aa7.49□□□□□ -1.21
SNORA40.15-201ENST00000516884 BCL2L12Q9HB09 334 aa7.49□□□□□ -1.21
SNORA40.15-201ENST00000516884 UPF1Q92900 1129 aaKnown RBP eCLIP7.48□□□□□ -1.21
SNORA40.15-201ENST00000516884 HCSTQ9UBK5 93 aa7.48□□□□□ -1.21
SNORA40.15-201ENST00000516884 JPH4Q96JJ6 628 aa7.46□□□□□ -1.22
SNORA40.15-201ENST00000516884 KCNK17Q96T54 332 aa7.46□□□□□ -1.22
SNORA40.15-201ENST00000516884 VPS9D1Q9Y2B5 631 aa7.46□□□□□ -1.22
SNORA40.15-201ENST00000516884 DDX27Q96GQ7 796 aaKnown RBP7.45□□□□□ -1.22
SNORA40.15-201ENST00000516884 ZNF454Q8N9F8 522 aa7.44□□□□□ -1.22
SNORA40.15-201ENST00000516884 LARP6Q9BRS8 491 aaKnown RBP7.44□□□□□ -1.22
SNORA40.15-201ENST00000516884 EMILIN3Q9NT22 766 aa7.44□□□□□ -1.22
SNORA40.15-201ENST00000516884 BHMG1C9JSJ3 638 aaPredicted RBP7.43□□□□□ -1.22
SNORA40.15-201ENST00000516884 EVI5O60447 810 aa7.43□□□□□ -1.22
SNORA40.15-201ENST00000516884 CADPS2Q86UW7 1296 aa7.43□□□□□ -1.22
SNORA40.15-201ENST00000516884 KCNH8Q96L42 1107 aa7.42□□□□□ -1.22
SNORA40.15-201ENST00000516884 ZBED2Q9BTP6 218 aa7.41□□□□□ -1.22
SNORA40.15-201ENST00000516884 PTPREP23469 700 aa7.4□□□□□ -1.22
SNORA40.15-201ENST00000516884 CAMK2BQ13554 666 aa7.4□□□□□ -1.22
SNORA40.15-201ENST00000516884 ZDHHC16Q969W1 377 aa7.4□□□□□ -1.22
SNORA40.15-201ENST00000516884 ADAM33Q9BZ11 813 aa7.4□□□□□ -1.22
SNORA40.15-201ENST00000516884 PLA2G2EQ9NZK7 142 aa7.4□□□□□ -1.22
SNORA40.15-201ENST00000516884 KCTD12Q96CX2 325 aaKnown RBP7.38□□□□□ -1.23
SNORA40.15-201ENST00000516884 PCDHGA10Q9Y5H3 936 aa7.37□□□□□ -1.23
SNORA40.15-201ENST00000516884 MAP3K9P80192 1104 aa7.36□□□□□ -1.23
SNORA40.15-201ENST00000516884 PPP1R3GB7ZBB8 358 aa7.34□□□□□ -1.23
SNORA40.15-201ENST00000516884 IFFO2Q5TF58 517 aa7.34□□□□□ -1.23
SNORA40.15-201ENST00000516884 THSD4Q6ZMP0 1018 aa7.34□□□□□ -1.23
SNORA40.15-201ENST00000516884 STAC3Q96MF2 364 aa7.34□□□□□ -1.23
SNORA40.15-201ENST00000516884 PHF14O94880 888 aa7.33□□□□□ -1.24
SNORA40.15-201ENST00000516884 DCAF8L2P0C7V8 631 aa7.33□□□□□ -1.24
SNORA40.15-201ENST00000516884 FBXW7Q969H0 707 aa7.33□□□□□ -1.24
SNORA40.15-201ENST00000516884 TYW1BQ6NUM6 668 aa7.32□□□□□ -1.24
SNORA40.15-201ENST00000516884 BBXQ8WY36 941 aaPredicted RBP7.32□□□□□ -1.24
SNORA40.15-201ENST00000516884 COL9A1P20849 921 aa7.31□□□□□ -1.24
SNORA40.15-201ENST00000516884 NBPF3Q9H094 633 aa7.31□□□□□ -1.24
SNORA40.15-201ENST00000516884 RABGEF1Q9UJ41 708 aa7.31□□□□□ -1.24
SNORA40.15-201ENST00000516884 MRPL50Q8N5N7 158 aaKnown RBP7.3□□□□□ -1.24
SNORA40.15-201ENST00000516884 WNT2BQ93097 391 aa7.29□□□□□ -1.24
SNORA40.15-201ENST00000516884 EPAS1Q99814 870 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms