RNA–Protein interactions for RNA: ENST00000516601.1

RNU5B-3P-201, Transcript of RNA, U5B small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU5B-3P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5B-3P-201ENST00000516601 RNF25Q96BH1 459 aaPredicted RBP8□□□□□ -1.13
RNU5B-3P-201ENST00000516601 ZSWIM6Q9HCJ5 1215 aa8□□□□□ -1.13
RNU5B-3P-201ENST00000516601 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.99□□□□□ -1.13
RNU5B-3P-201ENST00000516601 ZFP91Q96JP5 570 aaPredicted RBP7.99□□□□□ -1.13
RNU5B-3P-201ENST00000516601 SOX12O15370 315 aa7.97□□□□□ -1.13
RNU5B-3P-201ENST00000516601 RIOK3O14730 519 aaKnown RBP7.96□□□□□ -1.14
RNU5B-3P-201ENST00000516601 TRIM41Q8WV44 630 aa7.96□□□□□ -1.14
RNU5B-3P-201ENST00000516601 ZNF316A6NFI3 1004 aaPredicted RBP7.94□□□□□ -1.14
RNU5B-3P-201ENST00000516601 VGFO15240 615 aaPredicted RBP7.91□□□□□ -1.14
RNU5B-3P-201ENST00000516601 LSM11P83369 360 aaKnown RBP eCLIP7.91□□□□□ -1.14
RNU5B-3P-201ENST00000516601 PTGER2P43116 358 aa7.9□□□□□ -1.14
RNU5B-3P-201ENST00000516601 NUDT7P0C024 238 aa7.89□□□□□ -1.15
RNU5B-3P-201ENST00000516601 AXIN2Q9Y2T1 843 aa7.89□□□□□ -1.15
RNU5B-3P-201ENST00000516601 POTEEQ6S8J3 1075 aa7.88□□□□□ -1.15
RNU5B-3P-201ENST00000516601 FBXO22Q8NEZ5 403 aa7.88□□□□□ -1.15
RNU5B-3P-201ENST00000516601 NLRP6P59044 892 aa7.87□□□□□ -1.15
RNU5B-3P-201ENST00000516601 C2orf72A6NCS6 295 aa7.86□□□□□ -1.15
RNU5B-3P-201ENST00000516601 BCL11BQ9C0K0 894 aaPredicted RBP7.86□□□□□ -1.15
RNU5B-3P-201ENST00000516601 LHX6Q9UPM6 363 aa7.85□□□□□ -1.15
RNU5B-3P-201ENST00000516601 MFRPQ9BY79 579 aa7.84□□□□□ -1.15
RNU5B-3P-201ENST00000516601 STK24Q9Y6E0 443 aa7.84□□□□□ -1.15
RNU5B-3P-201ENST00000516601 KIF3CO14782 793 aa7.83□□□□□ -1.16
RNU5B-3P-201ENST00000516601 PLA2G2EQ9NZK7 142 aa7.82□□□□□ -1.16
RNU5B-3P-201ENST00000516601 PCDHGA4Q9Y5G9 962 aa7.81□□□□□ -1.16
RNU5B-3P-201ENST00000516601 PBX2P40425 430 aa7.79□□□□□ -1.16
RNU5B-3P-201ENST00000516601 STK25O00506 426 aa7.77□□□□□ -1.17
RNU5B-3P-201ENST00000516601 ADGRD1Q6QNK2 874 aa7.76□□□□□ -1.17
RNU5B-3P-201ENST00000516601 HCSTQ9UBK5 93 aa7.75□□□□□ -1.17
RNU5B-3P-201ENST00000516601 SLC34A2O95436 690 aa7.74□□□□□ -1.17
RNU5B-3P-201ENST00000516601 DMRTA1Q5VZB9 504 aa7.74□□□□□ -1.17
RNU5B-3P-201ENST00000516601 TMC2Q8TDI7 906 aa7.74□□□□□ -1.17
RNU5B-3P-201ENST00000516601 ARHGAP33O14559 1287 aa7.73□□□□□ -1.17
RNU5B-3P-201ENST00000516601 PPP1R37O75864 691 aa7.72□□□□□ -1.17
RNU5B-3P-201ENST00000516601 PSEN2P49810 448 aa7.72□□□□□ -1.17
RNU5B-3P-201ENST00000516601 TAOK2Q9UL54 1235 aa7.71□□□□□ -1.18
RNU5B-3P-201ENST00000516601 ECM2O94769 699 aaPredicted RBP7.69□□□□□ -1.18
RNU5B-3P-201ENST00000516601 KCTD12Q96CX2 325 aaKnown RBP7.69□□□□□ -1.18
RNU5B-3P-201ENST00000516601 KDM4FA0A1W2PPD8 638 aa7.68□□□□□ -1.18
RNU5B-3P-201ENST00000516601 HRO43593 1189 aa7.68□□□□□ -1.18
RNU5B-3P-201ENST00000516601 RGL2O15211 777 aa7.67□□□□□ -1.18
RNU5B-3P-201ENST00000516601 PSDA5PKW4 1024 aaPredicted RBP7.64□□□□□ -1.19
RNU5B-3P-201ENST00000516601 TK2O00142 265 aa7.64□□□□□ -1.19
RNU5B-3P-201ENST00000516601 PTCD2Q8WV60 388 aaKnown RBP7.64□□□□□ -1.19
RNU5B-3P-201ENST00000516601 PLPP6Q8IY26 295 aa7.63□□□□□ -1.19
RNU5B-3P-201ENST00000516601 KCNK17Q96T54 332 aa7.63□□□□□ -1.19
RNU5B-3P-201ENST00000516601 PTPN5P54829 565 aa7.62□□□□□ -1.19
RNU5B-3P-201ENST00000516601 PPP4R3BQ5MIZ7 849 aa7.61□□□□□ -1.19
RNU5B-3P-201ENST00000516601 STAC3Q96MF2 364 aa7.61□□□□□ -1.19
RNU5B-3P-201ENST00000516601 PKD2Q13563 968 aa7.6□□□□□ -1.19
RNU5B-3P-201ENST00000516601 DSG2Q14126 1118 aa7.6□□□□□ -1.19
RNU5B-3P-201ENST00000516601 FOXK1P85037 733 aa7.59□□□□□ -1.19
RNU5B-3P-201ENST00000516601 GPHNQ9NQX3 736 aaPredicted RBP7.57□□□□□ -1.2
RNU5B-3P-201ENST00000516601 VPS9D1Q9Y2B5 631 aa7.57□□□□□ -1.2
RNU5B-3P-201ENST00000516601 UPF1Q92900 1129 aaKnown RBP eCLIP7.55□□□□□ -1.2
RNU5B-3P-201ENST00000516601 TBC1D12O60347 775 aa7.54□□□□□ -1.2
RNU5B-3P-201ENST00000516601 ZNF454Q8N9F8 522 aa7.53□□□□□ -1.2
RNU5B-3P-201ENST00000516601 KCNH8Q96L42 1107 aa7.53□□□□□ -1.2
RNU5B-3P-201ENST00000516601 THSD4Q6ZMP0 1018 aa7.5□□□□□ -1.21
RNU5B-3P-201ENST00000516601 OXER1Q8TDS5 423 aa7.5□□□□□ -1.21
RNU5B-3P-201ENST00000516601 IRX2Q9BZI1 471 aaPredicted RBP7.5□□□□□ -1.21
RNU5B-3P-201ENST00000516601 BHMG1C9JSJ3 638 aaPredicted RBP7.48□□□□□ -1.21
RNU5B-3P-201ENST00000516601 WNT2BQ93097 391 aa7.48□□□□□ -1.21
RNU5B-3P-201ENST00000516601 BCL2L12Q9HB09 334 aa7.48□□□□□ -1.21
RNU5B-3P-201ENST00000516601 A0A0G2JS52 829 aa7.47□□□□□ -1.21
RNU5B-3P-201ENST00000516601 GOLGA8CPA6NN73 597 aa7.47□□□□□ -1.21
RNU5B-3P-201ENST00000516601 ZBED2Q9BTP6 218 aa7.46□□□□□ -1.22
RNU5B-3P-201ENST00000516601 PTPREP23469 700 aa7.45□□□□□ -1.22
RNU5B-3P-201ENST00000516601 FOSBP53539 338 aa7.45□□□□□ -1.22
RNU5B-3P-201ENST00000516601 IFFO2Q5TF58 517 aa7.45□□□□□ -1.22
RNU5B-3P-201ENST00000516601 MRPL50Q8N5N7 158 aaKnown RBP7.45□□□□□ -1.22
RNU5B-3P-201ENST00000516601 SLC4A5Q9BY07 1137 aa7.45□□□□□ -1.22
RNU5B-3P-201ENST00000516601 RGS20O76081 388 aa7.44□□□□□ -1.22
RNU5B-3P-201ENST00000516601 HS6ST3Q8IZP7 471 aa7.44□□□□□ -1.22
RNU5B-3P-201ENST00000516601 PPP1R15BQ5SWA1 713 aa7.43□□□□□ -1.22
RNU5B-3P-201ENST00000516601 ADAM33Q9BZ11 813 aa7.43□□□□□ -1.22
RNU5B-3P-201ENST00000516601 CHGAP10645 457 aaKnown RBP7.42□□□□□ -1.22
RNU5B-3P-201ENST00000516601 NKX1-1Q15270 411 aaPredicted RBP7.42□□□□□ -1.22
RNU5B-3P-201ENST00000516601 CRISPLD2Q9H0B8 497 aa7.42□□□□□ -1.22
RNU5B-3P-201ENST00000516601 EVI5O60447 810 aa7.4□□□□□ -1.22
RNU5B-3P-201ENST00000516601 NCKAP5LQ9HCH0 1330 aa7.39□□□□□ -1.23
RNU5B-3P-201ENST00000516601 ZDHHC16Q969W1 377 aa7.39□□□□□ -1.23
RNU5B-3P-201ENST00000516601 JPH4Q96JJ6 628 aa7.39□□□□□ -1.23
RNU5B-3P-201ENST00000516601 PROX2Q3B8N5 592 aa7.38□□□□□ -1.23
RNU5B-3P-201ENST00000516601 NBPF3Q9H094 633 aa7.38□□□□□ -1.23
RNU5B-3P-201ENST00000516601 ANO8Q9HCE9 1232 aaPredicted RBP7.38□□□□□ -1.23
RNU5B-3P-201ENST00000516601 BCAMP50895 628 aa7.37□□□□□ -1.23
RNU5B-3P-201ENST00000516601 COL9A1P20849 921 aa7.36□□□□□ -1.23
RNU5B-3P-201ENST00000516601 Q6ZNB5 142 aa7.35□□□□□ -1.23
RNU5B-3P-201ENST00000516601 ANKK1Q8NFD2 765 aa7.34□□□□□ -1.23
RNU5B-3P-201ENST00000516601 ITGBL1O95965 494 aaPredicted RBP7.33□□□□□ -1.24
RNU5B-3P-201ENST00000516601 PDE4AP27815 886 aa7.33□□□□□ -1.24
RNU5B-3P-201ENST00000516601 LARP6Q9BRS8 491 aaKnown RBP7.33□□□□□ -1.24
RNU5B-3P-201ENST00000516601 PCDHGA10Q9Y5H3 936 aa7.33□□□□□ -1.24
RNU5B-3P-201ENST00000516601 PPP1R3GB7ZBB8 358 aa7.32□□□□□ -1.24
RNU5B-3P-201ENST00000516601 MAP3K9P80192 1104 aa7.32□□□□□ -1.24
RNU5B-3P-201ENST00000516601 RABGEF1Q9UJ41 708 aa7.32□□□□□ -1.24
RNU5B-3P-201ENST00000516601 WBP1LQ9NX94 342 aa7.31□□□□□ -1.24
RNU5B-3P-201ENST00000516601 EMILIN3Q9NT22 766 aa7.3□□□□□ -1.24
RNU5B-3P-201ENST00000516601 SOWAHBA6NEL2 793 aa7.29□□□□□ -1.24
RNU5B-3P-201ENST00000516601 DDX27Q96GQ7 796 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms