RNA–Protein interactions for RNA: ENST00000516549.1

RN7SKP135-201, Transcript of RNA, 7SK small nuclear pseudogene 135, humanhuman

BASIC

Gene RN7SKP135, Length 247 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP135-201ENST00000516549 TROQ12816 1431 aaPredicted RBP17.4■□□□□ 0.38
RN7SKP135-201ENST00000516549 RNF216Q9NWF9 866 aaPredicted RBP17.4■□□□□ 0.38
RN7SKP135-201ENST00000516549 ARAP3Q8WWN8 1544 aa17.39■□□□□ 0.37
RN7SKP135-201ENST00000516549 TTC37Q6PGP7 1564 aa17.39■□□□□ 0.37
RN7SKP135-201ENST00000516549 COL17A1Q9UMD9 1497 aaPredicted RBP17.38■□□□□ 0.37
RN7SKP135-201ENST00000516549 CNKSR2Q8WXI2 1034 aa17.38■□□□□ 0.37
RN7SKP135-201ENST00000516549 MYO5CQ9NQX4 1742 aa17.37■□□□□ 0.37
RN7SKP135-201ENST00000516549 LOC105371045A0A1W2PR82 267 aa17.35■□□□□ 0.37
RN7SKP135-201ENST00000516549 FANCAO15360 1455 aa17.35■□□□□ 0.37
RN7SKP135-201ENST00000516549 PLCH2O75038 1416 aa17.32■□□□□ 0.36
RN7SKP135-201ENST00000516549 AKNAQ7Z591 1439 aa17.3■□□□□ 0.36
RN7SKP135-201ENST00000516549 EFCAB2Q5VUJ9 269 aa17.28■□□□□ 0.36
RN7SKP135-201ENST00000516549 DENND4BO75064 1496 aaPredicted RBP17.28■□□□□ 0.36
RN7SKP135-201ENST00000516549 ARHGAP5Q13017 1502 aa17.26■□□□□ 0.35
RN7SKP135-201ENST00000516549 VPS8Q8N3P4 1428 aa17.26■□□□□ 0.35
RN7SKP135-201ENST00000516549 MTUS2Q5JR59 1369 aa17.26■□□□□ 0.35
RN7SKP135-201ENST00000516549 PREX2Q70Z35 1606 aa17.25■□□□□ 0.35
RN7SKP135-201ENST00000516549 ADGRL1O94910 1474 aa17.25■□□□□ 0.35
RN7SKP135-201ENST00000516549 RICTORQ6R327 1708 aa17.25■□□□□ 0.35
RN7SKP135-201ENST00000516549 RAPGEF3O95398 923 aa17.24■□□□□ 0.35
RN7SKP135-201ENST00000516549 FRMPD1Q5SYB0 1578 aa17.23■□□□□ 0.35
RN7SKP135-201ENST00000516549 EHBP1L1Q8N3D4 1523 aa17.23■□□□□ 0.35
RN7SKP135-201ENST00000516549 CDC42BPBQ9Y5S2 1711 aa17.23■□□□□ 0.35
RN7SKP135-201ENST00000516549 CDC42BPAQ5VT25 1732 aa17.22■□□□□ 0.35
RN7SKP135-201ENST00000516549 ZMYM4Q5VZL5 1548 aa17.21■□□□□ 0.34
RN7SKP135-201ENST00000516549 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.34
RN7SKP135-201ENST00000516549 POGZQ7Z3K3 1410 aa17.19■□□□□ 0.34
RN7SKP135-201ENST00000516549 TIAM1Q13009 1591 aa17.19■□□□□ 0.34
RN7SKP135-201ENST00000516549 MAGI2Q86UL8 1455 aa17.18■□□□□ 0.34
RN7SKP135-201ENST00000516549 ARHGEF40Q8TER5 1519 aa17.18■□□□□ 0.34
RN7SKP135-201ENST00000516549 CCNB3Q8WWL7 1395 aa17.17■□□□□ 0.34
RN7SKP135-201ENST00000516549 ZNF518AQ6AHZ1 1483 aa17.17■□□□□ 0.34
RN7SKP135-201ENST00000516549 ITSN2Q9NZM3 1697 aa17.16■□□□□ 0.34
RN7SKP135-201ENST00000516549 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
RN7SKP135-201ENST00000516549 ZFYVE16Q7Z3T8 1539 aa17.16■□□□□ 0.34
RN7SKP135-201ENST00000516549 ABCC1P33527 1531 aa17.15■□□□□ 0.34
RN7SKP135-201ENST00000516549 MAP3K1Q13233 1512 aa17.15■□□□□ 0.34
RN7SKP135-201ENST00000516549 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
RN7SKP135-201ENST00000516549 KDM4FA0A1W2PPD8 638 aa17.14■□□□□ 0.33
RN7SKP135-201ENST00000516549 PLEKHH2Q8IVE3 1493 aa17.12■□□□□ 0.33
RN7SKP135-201ENST00000516549 APLP2Q06481 763 aa17.12■□□□□ 0.33
RN7SKP135-201ENST00000516549 CFDP1Q9UEE9 299 aaPredicted RBP17.12■□□□□ 0.33
RN7SKP135-201ENST00000516549 KDM5CP41229 1560 aa17.11■□□□□ 0.33
RN7SKP135-201ENST00000516549 LRRC9Q6ZRR7 1453 aa17.1■□□□□ 0.33
RN7SKP135-201ENST00000516549 HECW2Q9P2P5 1572 aa17.1■□□□□ 0.33
RN7SKP135-201ENST00000516549 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
RN7SKP135-201ENST00000516549 SAMD9LQ8IVG5 1584 aa17.09■□□□□ 0.33
RN7SKP135-201ENST00000516549 NCOA2Q15596 1464 aa17.08■□□□□ 0.32
RN7SKP135-201ENST00000516549 ARID4BQ4LE39 1312 aaPredicted RBP17.08■□□□□ 0.32
RN7SKP135-201ENST00000516549 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.32
RN7SKP135-201ENST00000516549 SYCP2Q9BX26 1530 aa17.06■□□□□ 0.32
RN7SKP135-201ENST00000516549 YEATS2Q9ULM3 1422 aa17.06■□□□□ 0.32
RN7SKP135-201ENST00000516549 KIAA1107Q9UPP5 1409 aa17.06■□□□□ 0.32
RN7SKP135-201ENST00000516549 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
RN7SKP135-201ENST00000516549 ATP10AO60312 1499 aa17.05■□□□□ 0.32
RN7SKP135-201ENST00000516549 MLH3Q9UHC1 1453 aa17.05■□□□□ 0.32
RN7SKP135-201ENST00000516549 BCORL1Q5H9F3 1711 aa17.05■□□□□ 0.32
RN7SKP135-201ENST00000516549 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
RN7SKP135-201ENST00000516549 C9orf84Q5VXU9 1444 aa17.04■□□□□ 0.32
RN7SKP135-201ENST00000516549 TRAPPC8Q9Y2L5 1435 aa17.04■□□□□ 0.32
RN7SKP135-201ENST00000516549 ADAMTSL3P82987 1691 aa17.03■□□□□ 0.32
RN7SKP135-201ENST00000516549 REREQ9P2R6 1566 aa17.01■□□□□ 0.31
RN7SKP135-201ENST00000516549 DIP2CQ9Y2E4 1556 aa17.01■□□□□ 0.31
RN7SKP135-201ENST00000516549 HNRNPMP52272 730 aaKnown RBP eCLIP17■□□□□ 0.31
RN7SKP135-201ENST00000516549 KIDINS220Q9ULH0 1771 aa17■□□□□ 0.31
RN7SKP135-201ENST00000516549 ABCA6Q8N139 1617 aa16.99■□□□□ 0.31
RN7SKP135-201ENST00000516549 SPAG9O60271 1321 aaKnown RBP16.99■□□□□ 0.31
RN7SKP135-201ENST00000516549 CAMSAP2Q08AD1 1489 aa16.98■□□□□ 0.31
RN7SKP135-201ENST00000516549 KANK4Q5T7N3 995 aaPredicted RBP16.97■□□□□ 0.31
RN7SKP135-201ENST00000516549 RSPH4AQ5TD94 716 aa16.97■□□□□ 0.31
RN7SKP135-201ENST00000516549 ATP7AQ04656 1500 aa16.96■□□□□ 0.31
RN7SKP135-201ENST00000516549 MADDQ8WXG6 1647 aa16.96■□□□□ 0.31
RN7SKP135-201ENST00000516549 INO80Q9ULG1 1556 aaPredicted RBP16.96■□□□□ 0.31
RN7SKP135-201ENST00000516549 SIGLEC1Q9BZZ2 1709 aa16.96■□□□□ 0.3
RN7SKP135-201ENST00000516549 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.3
RN7SKP135-201ENST00000516549 MIA2Q96PC5 1412 aa16.95■□□□□ 0.3
RN7SKP135-201ENST00000516549 ZNF644Q9H582 1327 aaPredicted RBP16.95■□□□□ 0.3
RN7SKP135-201ENST00000516549 FER1L4A9Z1Z3 1794 aa16.94■□□□□ 0.3
RN7SKP135-201ENST00000516549 CCDC141Q6ZP82 1450 aa16.94■□□□□ 0.3
RN7SKP135-201ENST00000516549 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
RN7SKP135-201ENST00000516549 AGLP35573 1532 aa16.94■□□□□ 0.3
RN7SKP135-201ENST00000516549 RIMS1Q86UR5 1692 aaKnown RBP16.94■□□□□ 0.3
RN7SKP135-201ENST00000516549 PTPRMP28827 1452 aa16.93■□□□□ 0.3
RN7SKP135-201ENST00000516549 ARHGEF5Q12774 1597 aa16.93■□□□□ 0.3
RN7SKP135-201ENST00000516549 ADGBQ8N7X0 1667 aa16.92■□□□□ 0.3
RN7SKP135-201ENST00000516549 RTEL1-TNFRSF6BF6WH68 1400 aa16.92■□□□□ 0.3
RN7SKP135-201ENST00000516549 MLECQ14165 292 aa16.91■□□□□ 0.3
RN7SKP135-201ENST00000516549 A2MP01023 1474 aa16.88■□□□□ 0.29
RN7SKP135-201ENST00000516549 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
RN7SKP135-201ENST00000516549 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
RN7SKP135-201ENST00000516549 PLXNC1O60486 1568 aa16.86■□□□□ 0.29
RN7SKP135-201ENST00000516549 ESF1Q9H501 851 aaKnown RBP16.86■□□□□ 0.29
RN7SKP135-201ENST00000516549 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
RN7SKP135-201ENST00000516549 MAST1Q9Y2H9 1570 aa16.84■□□□□ 0.29
RN7SKP135-201ENST00000516549 FGD6Q6ZV73 1430 aa16.83■□□□□ 0.28
RN7SKP135-201ENST00000516549 CNTLNQ9NXG0 1405 aa16.83■□□□□ 0.28
RN7SKP135-201ENST00000516549 TCOF1Q13428 1488 aaKnown RBP16.8■□□□□ 0.28
RN7SKP135-201ENST00000516549 DHX29Q7Z478 1369 aaKnown RBP16.8■□□□□ 0.28
RN7SKP135-201ENST00000516549 CROCC2H7BZ55 1655 aa16.79■□□□□ 0.28
RN7SKP135-201ENST00000516549 SHANK2Q9UPX8 1470 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms