RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ILDR1Q86SU0 546 aaPredicted RBP3.1□□□□□ -1.91
RNU6-542P-201ENST00000516405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-542P-201ENST00000516405 BOLA1Q9Y3E2 137 aa3.08□□□□□ -1.92
RNU6-542P-201ENST00000516405 TMEM92Q6UXU6 159 aa3.07□□□□□ -1.92
RNU6-542P-201ENST00000516405 MKRN3Q13064 507 aaKnown RBP3.06□□□□□ -1.92
RNU6-542P-201ENST00000516405 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
RNU6-542P-201ENST00000516405 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
RNU6-542P-201ENST00000516405 TK2O00142 265 aa3.05□□□□□ -1.92
RNU6-542P-201ENST00000516405 WIPF1O43516 503 aa3.05□□□□□ -1.92
RNU6-542P-201ENST00000516405 DMRTA1Q5VZB9 504 aa3.05□□□□□ -1.92
RNU6-542P-201ENST00000516405 PSMG3-AS1Q96PY0 264 aa3.05□□□□□ -1.92
RNU6-542P-201ENST00000516405 PCDHB8Q9UN66 801 aa3.05□□□□□ -1.92
RNU6-542P-201ENST00000516405 KRTAP4-8A0A0G2JLE6 195 aa3.04□□□□□ -1.92
RNU6-542P-201ENST00000516405 ARHGAP33O14559 1287 aa3.04□□□□□ -1.92
RNU6-542P-201ENST00000516405 ITGBL1O95965 494 aaPredicted RBP3.03□□□□□ -1.92
RNU6-542P-201ENST00000516405 INSM1Q01101 510 aaPredicted RBP3.03□□□□□ -1.92
RNU6-542P-201ENST00000516405 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
RNU6-542P-201ENST00000516405 THSD4Q6ZMP0 1018 aa3.02□□□□□ -1.93
RNU6-542P-201ENST00000516405 WFS1O76024 890 aa3.01□□□□□ -1.93
RNU6-542P-201ENST00000516405 PSEN2P49810 448 aa3.01□□□□□ -1.93
RNU6-542P-201ENST00000516405 LCE2CQ5TA81 110 aa3.01□□□□□ -1.93
RNU6-542P-201ENST00000516405 EHMT2Q96KQ7 1210 aa3.01□□□□□ -1.93
RNU6-542P-201ENST00000516405 KRTAP17-1Q9BYP8 105 aa3.01□□□□□ -1.93
RNU6-542P-201ENST00000516405 LHX6Q9UPM6 363 aa3.01□□□□□ -1.93
RNU6-542P-201ENST00000516405 G3V3G9 751 aa3□□□□□ -1.93
RNU6-542P-201ENST00000516405 NUBP1P53384 320 aa3□□□□□ -1.93
RNU6-542P-201ENST00000516405 GOLGA2Q08379 1002 aa3□□□□□ -1.93
RNU6-542P-201ENST00000516405 DCAF8Q5TAQ9 597 aa3□□□□□ -1.93
RNU6-542P-201ENST00000516405 NUDT7P0C024 238 aa2.99□□□□□ -1.93
RNU6-542P-201ENST00000516405 NFX1Q12986 1120 aaKnown RBP2.99□□□□□ -1.93
RNU6-542P-201ENST00000516405 SPDYE4A6NLX3 237 aa2.98□□□□□ -1.93
RNU6-542P-201ENST00000516405 PYGBP11216 843 aa2.97□□□□□ -1.93
RNU6-542P-201ENST00000516405 STAC3Q96MF2 364 aa2.97□□□□□ -1.93
RNU6-542P-201ENST00000516405 MYT1Q01538 1121 aa2.96□□□□□ -1.94
RNU6-542P-201ENST00000516405 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
RNU6-542P-201ENST00000516405 KRTAP4-7Q9BYR0 210 aa2.96□□□□□ -1.94
RNU6-542P-201ENST00000516405 PRKD2Q9BZL6 878 aa2.96□□□□□ -1.94
RNU6-542P-201ENST00000516405 PDZRN3Q9UPQ7 1066 aa2.96□□□□□ -1.94
RNU6-542P-201ENST00000516405 SLC4A1APQ9BWU0 796 aaKnown RBP2.95□□□□□ -1.94
RNU6-542P-201ENST00000516405 LORP23490 312 aaPredicted RBP2.94□□□□□ -1.94
RNU6-542P-201ENST00000516405 KCTD17Q8N5Z5 321 aa2.94□□□□□ -1.94
RNU6-542P-201ENST00000516405 MIER1Q8N108 512 aa2.93□□□□□ -1.94
RNU6-542P-201ENST00000516405 BHMG1C9JSJ3 638 aaPredicted RBP2.92□□□□□ -1.94
RNU6-542P-201ENST00000516405 WNT2BQ93097 391 aa2.92□□□□□ -1.94
RNU6-542P-201ENST00000516405 VPS9D1Q9Y2B5 631 aa2.92□□□□□ -1.94
RNU6-542P-201ENST00000516405 KCNC4Q03721 635 aa2.91□□□□□ -1.94
RNU6-542P-201ENST00000516405 FAM212AQ96EL1 285 aa2.91□□□□□ -1.94
RNU6-542P-201ENST00000516405 FAM181BA6NEQ2 426 aa2.9□□□□□ -1.95
RNU6-542P-201ENST00000516405 MICALL2Q8IY33 904 aa2.9□□□□□ -1.95
RNU6-542P-201ENST00000516405 ANO8Q9HCE9 1232 aaPredicted RBP2.9□□□□□ -1.95
RNU6-542P-201ENST00000516405 V9GY48 417 aaPredicted RBP2.9□□□□□ -1.95
RNU6-542P-201ENST00000516405 BTBD11A6QL63 1104 aa2.89□□□□□ -1.95
RNU6-542P-201ENST00000516405 GSK3AP49840 483 aa2.89□□□□□ -1.95
RNU6-542P-201ENST00000516405 PLEKHG5O94827 1062 aa2.88□□□□□ -1.95
RNU6-542P-201ENST00000516405 PSEN1P49768 467 aa2.87□□□□□ -1.95
RNU6-542P-201ENST00000516405 TRIM67Q6ZTA4 783 aa2.87□□□□□ -1.95
RNU6-542P-201ENST00000516405 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
RNU6-542P-201ENST00000516405 PKDCCQ504Y2 493 aa2.86□□□□□ -1.95
RNU6-542P-201ENST00000516405 PCDHGA4Q9Y5G9 962 aa2.86□□□□□ -1.95
RNU6-542P-201ENST00000516405 KDM4FA0A1W2PPD8 638 aa2.85□□□□□ -1.95
RNU6-542P-201ENST00000516405 ST8SIA5O15466 376 aa2.85□□□□□ -1.95
RNU6-542P-201ENST00000516405 DGAT1O75907 488 aa2.85□□□□□ -1.95
RNU6-542P-201ENST00000516405 CABP2Q9NPB3 220 aa2.85□□□□□ -1.95
RNU6-542P-201ENST00000516405 GOLGA8CPA6NN73 597 aa2.84□□□□□ -1.95
RNU6-542P-201ENST00000516405 ZSCAN1Q8NBB4 408 aa2.84□□□□□ -1.95
RNU6-542P-201ENST00000516405 KCNK17Q96T54 332 aa2.84□□□□□ -1.95
RNU6-542P-201ENST00000516405 AAASQ9NRG9 546 aa2.84□□□□□ -1.95
RNU6-542P-201ENST00000516405 PSDA5PKW4 1024 aaPredicted RBP2.83□□□□□ -1.96
RNU6-542P-201ENST00000516405 KCNMA1Q12791 1236 aa2.83□□□□□ -1.96
RNU6-542P-201ENST00000516405 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
RNU6-542P-201ENST00000516405 ZNF467Q7Z7K2 595 aaPredicted RBP2.83□□□□□ -1.96
RNU6-542P-201ENST00000516405 DACH1Q9UI36 760 aa2.83□□□□□ -1.96
RNU6-542P-201ENST00000516405 PPP1R18Q6NYC8 613 aa2.82□□□□□ -1.96
RNU6-542P-201ENST00000516405 PROM2Q8N271 834 aa2.82□□□□□ -1.96
RNU6-542P-201ENST00000516405 MRPL50Q8N5N7 158 aaKnown RBP2.82□□□□□ -1.96
RNU6-542P-201ENST00000516405 TERTO14746 1132 aaKnown RBP2.81□□□□□ -1.96
RNU6-542P-201ENST00000516405 BCAMP50895 628 aa2.81□□□□□ -1.96
RNU6-542P-201ENST00000516405 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
RNU6-542P-201ENST00000516405 SLC4A5Q9BY07 1137 aa2.81□□□□□ -1.96
RNU6-542P-201ENST00000516405 KRTAP4-9Q9BYQ8 210 aa2.81□□□□□ -1.96
RNU6-542P-201ENST00000516405 SLC34A2O95436 690 aa2.8□□□□□ -1.96
RNU6-542P-201ENST00000516405 KRTAP19-1Q8IUB9 90 aa2.8□□□□□ -1.96
RNU6-542P-201ENST00000516405 WBP1LQ9NX94 342 aa2.8□□□□□ -1.96
RNU6-542P-201ENST00000516405 GMPR2Q9P2T1 348 aaKnown RBP2.8□□□□□ -1.96
RNU6-542P-201ENST00000516405 C11orf95C9JLR9 678 aaPredicted RBP2.79□□□□□ -1.96
RNU6-542P-201ENST00000516405 KIF3CO14782 793 aa2.78□□□□□ -1.96
RNU6-542P-201ENST00000516405 PPP4R3BQ5MIZ7 849 aa2.78□□□□□ -1.96
RNU6-542P-201ENST00000516405 NYAP1Q6ZVC0 841 aa2.78□□□□□ -1.96
RNU6-542P-201ENST00000516405 KRTAP9-8Q9BYQ0 159 aa2.78□□□□□ -1.96
RNU6-542P-201ENST00000516405 PLCD3Q8N3E9 789 aa2.77□□□□□ -1.97
RNU6-542P-201ENST00000516405 TMEM151AQ8N4L1 468 aa2.77□□□□□ -1.97
RNU6-542P-201ENST00000516405 FAM187AA6NFU0 413 aa2.76□□□□□ -1.97
RNU6-542P-201ENST00000516405 GDF11O95390 407 aa2.76□□□□□ -1.97
RNU6-542P-201ENST00000516405 GMPRP36959 345 aa2.76□□□□□ -1.97
RNU6-542P-201ENST00000516405 PDAP1Q13442 181 aaKnown RBP2.76□□□□□ -1.97
RNU6-542P-201ENST00000516405 ZBED2Q9BTP6 218 aa2.76□□□□□ -1.97
RNU6-542P-201ENST00000516405 ZBTB47Q9UFB7 747 aaPredicted RBP2.76□□□□□ -1.97
RNU6-542P-201ENST00000516405 SOWAHBA6NEL2 793 aa2.75□□□□□ -1.97
RNU6-542P-201ENST00000516405 RASSF7Q02833 373 aa2.75□□□□□ -1.97
RNU6-542P-201ENST00000516405 Q8N3U1 123 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms