RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 RIOK3O14730 519 aaKnown RBP8.58□□□□□ -1.04
RNU2-53P-201ENST00000516257 SOX12O15370 315 aa8.58□□□□□ -1.04
RNU2-53P-201ENST00000516257 ZNF687Q8N1G0 1237 aa8.58□□□□□ -1.04
RNU2-53P-201ENST00000516257 MYT1LQ9UL68 1186 aa8.58□□□□□ -1.04
RNU2-53P-201ENST00000516257 ARSIQ5FYB1 569 aa8.55□□□□□ -1.04
RNU2-53P-201ENST00000516257 KHSRPQ92945 711 aaKnown RBP eCLIP8.54□□□□□ -1.04
RNU2-53P-201ENST00000516257 VGFO15240 615 aaPredicted RBP8.53□□□□□ -1.04
RNU2-53P-201ENST00000516257 ZNF316A6NFI3 1004 aaPredicted RBP8.49□□□□□ -1.05
RNU2-53P-201ENST00000516257 ANKRD13DQ6ZTN6 518 aa8.49□□□□□ -1.05
RNU2-53P-201ENST00000516257 FBXO22Q8NEZ5 403 aa8.49□□□□□ -1.05
RNU2-53P-201ENST00000516257 PTGER2P43116 358 aa8.46□□□□□ -1.06
RNU2-53P-201ENST00000516257 NLRP6P59044 892 aa8.46□□□□□ -1.06
RNU2-53P-201ENST00000516257 BCL11BQ9C0K0 894 aaPredicted RBP8.46□□□□□ -1.06
RNU2-53P-201ENST00000516257 LSM11P83369 360 aaKnown RBP eCLIP8.45□□□□□ -1.06
RNU2-53P-201ENST00000516257 MFRPQ9BY79 579 aa8.44□□□□□ -1.06
RNU2-53P-201ENST00000516257 NUDT7P0C024 238 aa8.43□□□□□ -1.06
RNU2-53P-201ENST00000516257 C2orf72A6NCS6 295 aa8.42□□□□□ -1.06
RNU2-53P-201ENST00000516257 KIF3CO14782 793 aa8.42□□□□□ -1.06
RNU2-53P-201ENST00000516257 POTEEQ6S8J3 1075 aa8.42□□□□□ -1.06
RNU2-53P-201ENST00000516257 STK24Q9Y6E0 443 aa8.42□□□□□ -1.06
RNU2-53P-201ENST00000516257 LHX6Q9UPM6 363 aa8.39□□□□□ -1.07
RNU2-53P-201ENST00000516257 AXIN2Q9Y2T1 843 aa8.39□□□□□ -1.07
RNU2-53P-201ENST00000516257 STK25O00506 426 aa8.36□□□□□ -1.07
RNU2-53P-201ENST00000516257 PBX2P40425 430 aa8.36□□□□□ -1.07
RNU2-53P-201ENST00000516257 PCDHGA4Q9Y5G9 962 aa8.36□□□□□ -1.07
RNU2-53P-201ENST00000516257 TAOK2Q9UL54 1235 aa8.34□□□□□ -1.07
RNU2-53P-201ENST00000516257 SLC34A2O95436 690 aa8.33□□□□□ -1.08
RNU2-53P-201ENST00000516257 TMC2Q8TDI7 906 aa8.3□□□□□ -1.08
RNU2-53P-201ENST00000516257 PLA2G2EQ9NZK7 142 aa8.3□□□□□ -1.08
RNU2-53P-201ENST00000516257 PPP1R37O75864 691 aa8.29□□□□□ -1.08
RNU2-53P-201ENST00000516257 ECM2O94769 699 aaPredicted RBP8.29□□□□□ -1.08
RNU2-53P-201ENST00000516257 ADGRD1Q6QNK2 874 aa8.29□□□□□ -1.08
RNU2-53P-201ENST00000516257 RGL2O15211 777 aa8.27□□□□□ -1.09
RNU2-53P-201ENST00000516257 ARHGAP33O14559 1287 aa8.26□□□□□ -1.09
RNU2-53P-201ENST00000516257 HCSTQ9UBK5 93 aa8.26□□□□□ -1.09
RNU2-53P-201ENST00000516257 KDM4FA0A1W2PPD8 638 aa8.25□□□□□ -1.09
RNU2-53P-201ENST00000516257 DMRTA1Q5VZB9 504 aa8.25□□□□□ -1.09
RNU2-53P-201ENST00000516257 PSEN2P49810 448 aa8.24□□□□□ -1.09
RNU2-53P-201ENST00000516257 HRO43593 1189 aa8.23□□□□□ -1.09
RNU2-53P-201ENST00000516257 PKD2Q13563 968 aa8.22□□□□□ -1.09
RNU2-53P-201ENST00000516257 PSDA5PKW4 1024 aaPredicted RBP8.21□□□□□ -1.1
RNU2-53P-201ENST00000516257 PTCD2Q8WV60 388 aaKnown RBP8.21□□□□□ -1.1
RNU2-53P-201ENST00000516257 TK2O00142 265 aa8.2□□□□□ -1.1
RNU2-53P-201ENST00000516257 PLPP6Q8IY26 295 aa8.18□□□□□ -1.1
RNU2-53P-201ENST00000516257 KCTD12Q96CX2 325 aaKnown RBP8.18□□□□□ -1.1
RNU2-53P-201ENST00000516257 FOXK1P85037 733 aa8.17□□□□□ -1.1
RNU2-53P-201ENST00000516257 PPP4R3BQ5MIZ7 849 aa8.16□□□□□ -1.1
RNU2-53P-201ENST00000516257 DSG2Q14126 1118 aa8.15□□□□□ -1.1
RNU2-53P-201ENST00000516257 KCNK17Q96T54 332 aa8.14□□□□□ -1.11
RNU2-53P-201ENST00000516257 GPHNQ9NQX3 736 aaPredicted RBP8.14□□□□□ -1.11
RNU2-53P-201ENST00000516257 STAC3Q96MF2 364 aa8.1□□□□□ -1.11
RNU2-53P-201ENST00000516257 TBC1D12O60347 775 aa8.09□□□□□ -1.11
RNU2-53P-201ENST00000516257 PTPN5P54829 565 aa8.09□□□□□ -1.11
RNU2-53P-201ENST00000516257 VPS9D1Q9Y2B5 631 aa8.09□□□□□ -1.11
RNU2-53P-201ENST00000516257 UPF1Q92900 1129 aaKnown RBP eCLIP8.08□□□□□ -1.12
RNU2-53P-201ENST00000516257 OXER1Q8TDS5 423 aa8.07□□□□□ -1.12
RNU2-53P-201ENST00000516257 KCNH8Q96L42 1107 aa8.07□□□□□ -1.12
RNU2-53P-201ENST00000516257 HS6ST3Q8IZP7 471 aa8.06□□□□□ -1.12
RNU2-53P-201ENST00000516257 ZNF454Q8N9F8 522 aa8.06□□□□□ -1.12
RNU2-53P-201ENST00000516257 BCL2L12Q9HB09 334 aa8.04□□□□□ -1.12
RNU2-53P-201ENST00000516257 BHMG1C9JSJ3 638 aaPredicted RBP8.02□□□□□ -1.13
RNU2-53P-201ENST00000516257 THSD4Q6ZMP0 1018 aa8.02□□□□□ -1.13
RNU2-53P-201ENST00000516257 SLC4A5Q9BY07 1137 aa8.02□□□□□ -1.13
RNU2-53P-201ENST00000516257 FOSBP53539 338 aa8.01□□□□□ -1.13
RNU2-53P-201ENST00000516257 CRISPLD2Q9H0B8 497 aa8.01□□□□□ -1.13
RNU2-53P-201ENST00000516257 NKX1-1Q15270 411 aaPredicted RBP8□□□□□ -1.13
RNU2-53P-201ENST00000516257 PPP1R15BQ5SWA1 713 aa8□□□□□ -1.13
RNU2-53P-201ENST00000516257 ZBED2Q9BTP6 218 aa8□□□□□ -1.13
RNU2-53P-201ENST00000516257 PTPREP23469 700 aa7.99□□□□□ -1.13
RNU2-53P-201ENST00000516257 IFFO2Q5TF58 517 aa7.99□□□□□ -1.13
RNU2-53P-201ENST00000516257 WNT2BQ93097 391 aa7.99□□□□□ -1.13
RNU2-53P-201ENST00000516257 A0A0G2JS52 829 aa7.98□□□□□ -1.13
RNU2-53P-201ENST00000516257 CHGAP10645 457 aaKnown RBP7.98□□□□□ -1.13
RNU2-53P-201ENST00000516257 MRPL50Q8N5N7 158 aaKnown RBP7.97□□□□□ -1.13
RNU2-53P-201ENST00000516257 GOLGA8CPA6NN73 597 aa7.96□□□□□ -1.14
RNU2-53P-201ENST00000516257 RGS20O76081 388 aa7.96□□□□□ -1.14
RNU2-53P-201ENST00000516257 ADAM33Q9BZ11 813 aa7.96□□□□□ -1.14
RNU2-53P-201ENST00000516257 IRX2Q9BZI1 471 aaPredicted RBP7.96□□□□□ -1.14
RNU2-53P-201ENST00000516257 NCKAP5LQ9HCH0 1330 aa7.96□□□□□ -1.14
RNU2-53P-201ENST00000516257 JPH4Q96JJ6 628 aa7.95□□□□□ -1.14
RNU2-53P-201ENST00000516257 EVI5O60447 810 aa7.94□□□□□ -1.14
RNU2-53P-201ENST00000516257 ANO8Q9HCE9 1232 aaPredicted RBP7.94□□□□□ -1.14
RNU2-53P-201ENST00000516257 ZDHHC16Q969W1 377 aa7.93□□□□□ -1.14
RNU2-53P-201ENST00000516257 DNAJC5Q9H3Z4 198 aa7.93□□□□□ -1.14
RNU2-53P-201ENST00000516257 NBPF3Q9H094 633 aa7.91□□□□□ -1.14
RNU2-53P-201ENST00000516257 PROX2Q3B8N5 592 aa7.9□□□□□ -1.14
RNU2-53P-201ENST00000516257 PDE4AP27815 886 aa7.89□□□□□ -1.15
RNU2-53P-201ENST00000516257 PPP1R3GB7ZBB8 358 aa7.87□□□□□ -1.15
RNU2-53P-201ENST00000516257 COL9A1P20849 921 aa7.87□□□□□ -1.15
RNU2-53P-201ENST00000516257 BCAMP50895 628 aa7.87□□□□□ -1.15
RNU2-53P-201ENST00000516257 LARP6Q9BRS8 491 aaKnown RBP7.87□□□□□ -1.15
RNU2-53P-201ENST00000516257 RYDENQ9NUL5 291 aaKnown RBP7.87□□□□□ -1.15
RNU2-53P-201ENST00000516257 ITGBL1O95965 494 aaPredicted RBP7.86□□□□□ -1.15
RNU2-53P-201ENST00000516257 DDX27Q96GQ7 796 aaKnown RBP7.86□□□□□ -1.15
RNU2-53P-201ENST00000516257 EMILIN3Q9NT22 766 aa7.86□□□□□ -1.15
RNU2-53P-201ENST00000516257 RABGEF1Q9UJ41 708 aa7.86□□□□□ -1.15
RNU2-53P-201ENST00000516257 PCDHGA10Q9Y5H3 936 aa7.86□□□□□ -1.15
RNU2-53P-201ENST00000516257 MAP3K9P80192 1104 aa7.85□□□□□ -1.15
RNU2-53P-201ENST00000516257 ANKK1Q8NFD2 765 aa7.85□□□□□ -1.15
RNU2-53P-201ENST00000516257 MFSD10Q14728 455 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms