RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 CFDP1Q9UEE9 299 aaPredicted RBP8.79□□□□□ -1
RN7SKP288-201ENST00000516227 CHIC2Q9UKJ5 165 aa8.79□□□□□ -1
RN7SKP288-201ENST00000516227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.79□□□□□ -1
RN7SKP288-201ENST00000516227 SAMD9LQ8IVG5 1584 aa8.78□□□□□ -1
RN7SKP288-201ENST00000516227 KDM6BO15054 1643 aa8.78□□□□□ -1
RN7SKP288-201ENST00000516227 ARHGAP5Q13017 1502 aa8.78□□□□□ -1
RN7SKP288-201ENST00000516227 DAPK1P53355 1430 aa8.78□□□□□ -1
RN7SKP288-201ENST00000516227 PTPRKQ15262 1439 aa8.78□□□□□ -1
RN7SKP288-201ENST00000516227 TSPOAP1O95153 1857 aa8.77□□□□□ -1.01
RN7SKP288-201ENST00000516227 KDM5BQ9UGL1 1544 aa8.77□□□□□ -1.01
RN7SKP288-201ENST00000516227 KCNH8Q96L42 1107 aa8.76□□□□□ -1.01
RN7SKP288-201ENST00000516227 RRP7BPQ9NSQ0 103 aa8.76□□□□□ -1.01
RN7SKP288-201ENST00000516227 HFM1A2PYH4 1435 aa8.76□□□□□ -1.01
RN7SKP288-201ENST00000516227 ARHGEF5Q12774 1597 aa8.76□□□□□ -1.01
RN7SKP288-201ENST00000516227 ZNF644Q9H582 1327 aaPredicted RBP8.76□□□□□ -1.01
RN7SKP288-201ENST00000516227 CLSPNQ9HAW4 1339 aa8.76□□□□□ -1.01
RN7SKP288-201ENST00000516227 RIMBP3CA6NJZ7 1639 aa8.76□□□□□ -1.01
RN7SKP288-201ENST00000516227 RIMBP3BA6NNM3 1639 aa8.76□□□□□ -1.01
RN7SKP288-201ENST00000516227 RIMBP3Q9UFD9 1639 aa8.76□□□□□ -1.01
RN7SKP288-201ENST00000516227 CFAP65Q6ZU64 1925 aaKnown RBP8.75□□□□□ -1.01
RN7SKP288-201ENST00000516227 NAIPQ13075 1403 aa8.74□□□□□ -1.01
RN7SKP288-201ENST00000516227 ABCA9Q8IUA7 1624 aa8.74□□□□□ -1.01
RN7SKP288-201ENST00000516227 MAPKBP1O60336 1514 aa8.74□□□□□ -1.01
RN7SKP288-201ENST00000516227 ABCC5O15440 1437 aa8.73□□□□□ -1.01
RN7SKP288-201ENST00000516227 AKNAQ7Z591 1439 aa8.72□□□□□ -1.01
RN7SKP288-201ENST00000516227 SYCP2Q9BX26 1530 aa8.72□□□□□ -1.01
RN7SKP288-201ENST00000516227 NPM1P06748 294 aaKnown RBP eCLIP8.72□□□□□ -1.01
RN7SKP288-201ENST00000516227 TRIM52Q96A61 297 aa8.72□□□□□ -1.01
RN7SKP288-201ENST00000516227 CFAP74Q9C0B2 1584 aa8.72□□□□□ -1.01
RN7SKP288-201ENST00000516227 WDR7Q9Y4E6 1490 aa8.7□□□□□ -1.02
RN7SKP288-201ENST00000516227 MAST1Q9Y2H9 1570 aa8.7□□□□□ -1.02
RN7SKP288-201ENST00000516227 ROCK1Q13464 1354 aa8.7□□□□□ -1.02
RN7SKP288-201ENST00000516227 SHANK2Q9UPX8 1470 aa8.7□□□□□ -1.02
RN7SKP288-201ENST00000516227 HNRNPMP52272 730 aaKnown RBP eCLIP8.69□□□□□ -1.02
RN7SKP288-201ENST00000516227 ADGRL2O95490 1459 aa8.69□□□□□ -1.02
RN7SKP288-201ENST00000516227 CCDC141Q6ZP82 1450 aa8.69□□□□□ -1.02
RN7SKP288-201ENST00000516227 PLEKHH2Q8IVE3 1493 aa8.69□□□□□ -1.02
RN7SKP288-201ENST00000516227 TSPY4P0CV99 314 aa8.68□□□□□ -1.02
RN7SKP288-201ENST00000516227 TSPY10P0CW01 314 aa8.68□□□□□ -1.02
RN7SKP288-201ENST00000516227 NEUROD1Q13562 356 aa8.68□□□□□ -1.02
RN7SKP288-201ENST00000516227 ANKRD30AQ9BXX3 1397 aa8.68□□□□□ -1.02
RN7SKP288-201ENST00000516227 C9orf84Q5VXU9 1444 aa8.68□□□□□ -1.02
RN7SKP288-201ENST00000516227 ABCC1P33527 1531 aa8.68□□□□□ -1.02
RN7SKP288-201ENST00000516227 PLXNC1O60486 1568 aa8.68□□□□□ -1.02
RN7SKP288-201ENST00000516227 PLCH2O75038 1416 aa8.67□□□□□ -1.02
RN7SKP288-201ENST00000516227 ASXL2Q76L83 1435 aa8.67□□□□□ -1.02
RN7SKP288-201ENST00000516227 ARAP3Q8WWN8 1544 aa8.67□□□□□ -1.02
RN7SKP288-201ENST00000516227 KIF13AQ9H1H9 1805 aa8.66□□□□□ -1.02
RN7SKP288-201ENST00000516227 NCOA1Q15788 1441 aa8.66□□□□□ -1.02
RN7SKP288-201ENST00000516227 ACIN1Q9UKV3 1341 aaKnown RBP8.66□□□□□ -1.02
RN7SKP288-201ENST00000516227 EFCAB2Q5VUJ9 269 aa8.66□□□□□ -1.02
RN7SKP288-201ENST00000516227 SIN3AQ96ST3 1273 aa8.66□□□□□ -1.02
RN7SKP288-201ENST00000516227 MBD5Q9P267 1494 aa8.64□□□□□ -1.03
RN7SKP288-201ENST00000516227 RSPH4AQ5TD94 716 aa8.64□□□□□ -1.03
RN7SKP288-201ENST00000516227 MAP3K4Q9Y6R4 1608 aa8.64□□□□□ -1.03
RN7SKP288-201ENST00000516227 UNC13BO14795 1591 aa8.64□□□□□ -1.03
RN7SKP288-201ENST00000516227 KIDINS220Q9ULH0 1771 aa8.63□□□□□ -1.03
RN7SKP288-201ENST00000516227 FANCAO15360 1455 aa8.63□□□□□ -1.03
RN7SKP288-201ENST00000516227 CEP152O94986 1710 aa8.63□□□□□ -1.03
RN7SKP288-201ENST00000516227 POLR1AO95602 1720 aaPredicted RBP8.63□□□□□ -1.03
RN7SKP288-201ENST00000516227 ANKRD50Q9ULJ7 1429 aa8.63□□□□□ -1.03
RN7SKP288-201ENST00000516227 KIF1BO60333 1816 aa8.62□□□□□ -1.03
RN7SKP288-201ENST00000516227 ZNF316A6NFI3 1004 aaPredicted RBP8.62□□□□□ -1.03
RN7SKP288-201ENST00000516227 MPHOSPH9Q99550 1183 aa8.62□□□□□ -1.03
RN7SKP288-201ENST00000516227 ARHGEF12Q9NZN5 1544 aa8.62□□□□□ -1.03
RN7SKP288-201ENST00000516227 KIAA1107Q9UPP5 1409 aa8.62□□□□□ -1.03
RN7SKP288-201ENST00000516227 IQGAP3Q86VI3 1631 aa8.62□□□□□ -1.03
RN7SKP288-201ENST00000516227 TONSLQ96HA7 1378 aa8.61□□□□□ -1.03
RN7SKP288-201ENST00000516227 KIF15Q9NS87 1388 aa8.61□□□□□ -1.03
RN7SKP288-201ENST00000516227 INO80Q9ULG1 1556 aaPredicted RBP8.61□□□□□ -1.03
RN7SKP288-201ENST00000516227 DUOX2Q9NRD8 1548 aa8.61□□□□□ -1.03
RN7SKP288-201ENST00000516227 RICTORQ6R327 1708 aa8.61□□□□□ -1.03
RN7SKP288-201ENST00000516227 CYB5RLQ6IPT4 315 aa8.61□□□□□ -1.03
RN7SKP288-201ENST00000516227 SLC4A1APQ9BWU0 796 aaKnown RBP8.61□□□□□ -1.03
RN7SKP288-201ENST00000516227 MYT1LQ9UL68 1186 aa8.61□□□□□ -1.03
RN7SKP288-201ENST00000516227 SPHKAPQ2M3C7 1700 aa8.6□□□□□ -1.03
RN7SKP288-201ENST00000516227 ATP7AQ04656 1500 aa8.6□□□□□ -1.03
RN7SKP288-201ENST00000516227 ADGRL1O94910 1474 aa8.6□□□□□ -1.03
RN7SKP288-201ENST00000516227 PZPP20742 1482 aa8.59□□□□□ -1.03
RN7SKP288-201ENST00000516227 EIF2AK4Q9P2K8 1649 aaKnown RBP8.59□□□□□ -1.03
RN7SKP288-201ENST00000516227 ZFYVE16Q7Z3T8 1539 aa8.59□□□□□ -1.03
RN7SKP288-201ENST00000516227 KDM5DQ9BY66 1539 aa8.59□□□□□ -1.03
RN7SKP288-201ENST00000516227 E9PCH4 1651 aa8.59□□□□□ -1.03
RN7SKP288-201ENST00000516227 DENND4BO75064 1496 aaPredicted RBP8.58□□□□□ -1.04
RN7SKP288-201ENST00000516227 HECW2Q9P2P5 1572 aa8.58□□□□□ -1.04
RN7SKP288-201ENST00000516227 CD109Q6YHK3 1445 aa8.58□□□□□ -1.04
RN7SKP288-201ENST00000516227 TRAPPC8Q9Y2L5 1435 aa8.58□□□□□ -1.04
RN7SKP288-201ENST00000516227 FOXD1Q16676 465 aa8.58□□□□□ -1.04
RN7SKP288-201ENST00000516227 TIMELESSQ9UNS1 1208 aa8.58□□□□□ -1.04
RN7SKP288-201ENST00000516227 PPRC1Q5VV67 1664 aaKnown RBP8.58□□□□□ -1.04
RN7SKP288-201ENST00000516227 NUP155O75694 1391 aa8.58□□□□□ -1.04
RN7SKP288-201ENST00000516227 DEPDC5O75140 1603 aa8.58□□□□□ -1.04
RN7SKP288-201ENST00000516227 SPAG9O60271 1321 aaKnown RBP8.57□□□□□ -1.04
RN7SKP288-201ENST00000516227 GLI2P10070 1586 aa8.57□□□□□ -1.04
RN7SKP288-201ENST00000516227 DIP2BQ9P265 1576 aa8.57□□□□□ -1.04
RN7SKP288-201ENST00000516227 SCAPERQ9BY12 1400 aa8.57□□□□□ -1.04
RN7SKP288-201ENST00000516227 TET3O43151 1660 aa8.56□□□□□ -1.04
RN7SKP288-201ENST00000516227 FAM135AQ9P2D6 1515 aa8.56□□□□□ -1.04
RN7SKP288-201ENST00000516227 DIEXFQ68CQ4 756 aaKnown RBP8.56□□□□□ -1.04
RN7SKP288-201ENST00000516227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms