RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 MAGI2Q86UL8 1455 aa17.73■□□□□ 0.43
SCARNA16.1-201ENST00000516133 FRMPD1Q5SYB0 1578 aa17.73■□□□□ 0.43
SCARNA16.1-201ENST00000516133 POGZQ7Z3K3 1410 aa17.72■□□□□ 0.43
SCARNA16.1-201ENST00000516133 RICTORQ6R327 1708 aa17.72■□□□□ 0.43
SCARNA16.1-201ENST00000516133 CCNB3Q8WWL7 1395 aa17.71■□□□□ 0.43
SCARNA16.1-201ENST00000516133 CFDP1Q9UEE9 299 aaPredicted RBP17.71■□□□□ 0.43
SCARNA16.1-201ENST00000516133 AFAP1Q8N556 730 aa17.7■□□□□ 0.42
SCARNA16.1-201ENST00000516133 GPATCH8Q9UKJ3 1502 aaKnown RBP17.7■□□□□ 0.42
SCARNA16.1-201ENST00000516133 ARID4BQ4LE39 1312 aaPredicted RBP17.7■□□□□ 0.42
SCARNA16.1-201ENST00000516133 ZMYM4Q5VZL5 1548 aa17.69■□□□□ 0.42
SCARNA16.1-201ENST00000516133 ZNF777Q9ULD5 760 aaPredicted RBP17.69■□□□□ 0.42
SCARNA16.1-201ENST00000516133 CDC42BPBQ9Y5S2 1711 aa17.69■□□□□ 0.42
SCARNA16.1-201ENST00000516133 ZNF518AQ6AHZ1 1483 aa17.69■□□□□ 0.42
SCARNA16.1-201ENST00000516133 PREX2Q70Z35 1606 aa17.69■□□□□ 0.42
SCARNA16.1-201ENST00000516133 EHBP1L1Q8N3D4 1523 aa17.67■□□□□ 0.42
SCARNA16.1-201ENST00000516133 MYT1LQ9UL68 1186 aa17.66■□□□□ 0.42
SCARNA16.1-201ENST00000516133 CDC42BPAQ5VT25 1732 aa17.66■□□□□ 0.42
SCARNA16.1-201ENST00000516133 APLP2Q06481 763 aa17.65■□□□□ 0.42
SCARNA16.1-201ENST00000516133 ZFYVE16Q7Z3T8 1539 aa17.65■□□□□ 0.42
SCARNA16.1-201ENST00000516133 YEATS2Q9ULM3 1422 aa17.64■□□□□ 0.42
SCARNA16.1-201ENST00000516133 ARHGEF40Q8TER5 1519 aa17.64■□□□□ 0.41
SCARNA16.1-201ENST00000516133 TIAM1Q13009 1591 aa17.63■□□□□ 0.41
SCARNA16.1-201ENST00000516133 MAP3K1Q13233 1512 aa17.62■□□□□ 0.41
SCARNA16.1-201ENST00000516133 HNRNPMP52272 730 aaKnown RBP eCLIP17.62■□□□□ 0.41
SCARNA16.1-201ENST00000516133 KIAA1107Q9UPP5 1409 aa17.62■□□□□ 0.41
SCARNA16.1-201ENST00000516133 TRAPPC8Q9Y2L5 1435 aa17.62■□□□□ 0.41
SCARNA16.1-201ENST00000516133 ATP10AO60312 1499 aa17.62■□□□□ 0.41
SCARNA16.1-201ENST00000516133 PLEKHH2Q8IVE3 1493 aa17.62■□□□□ 0.41
SCARNA16.1-201ENST00000516133 ABCC1P33527 1531 aa17.62■□□□□ 0.41
SCARNA16.1-201ENST00000516133 ARHGEF12Q9NZN5 1544 aa17.62■□□□□ 0.41
SCARNA16.1-201ENST00000516133 MLH3Q9UHC1 1453 aa17.61■□□□□ 0.41
SCARNA16.1-201ENST00000516133 LRRC9Q6ZRR7 1453 aa17.6■□□□□ 0.41
SCARNA16.1-201ENST00000516133 KDM5CP41229 1560 aa17.6■□□□□ 0.41
SCARNA16.1-201ENST00000516133 NCOA2Q15596 1464 aa17.59■□□□□ 0.41
SCARNA16.1-201ENST00000516133 KANK4Q5T7N3 995 aaPredicted RBP17.59■□□□□ 0.41
SCARNA16.1-201ENST00000516133 SPAG9O60271 1321 aaKnown RBP17.57■□□□□ 0.4
SCARNA16.1-201ENST00000516133 SUPT6HQ7KZ85 1726 aaKnown RBP17.57■□□□□ 0.4
SCARNA16.1-201ENST00000516133 SAMD9LQ8IVG5 1584 aa17.57■□□□□ 0.4
SCARNA16.1-201ENST00000516133 C9orf84Q5VXU9 1444 aa17.56■□□□□ 0.4
SCARNA16.1-201ENST00000516133 ZNF644Q9H582 1327 aaPredicted RBP17.56■□□□□ 0.4
SCARNA16.1-201ENST00000516133 ITSN2Q9NZM3 1697 aa17.55■□□□□ 0.4
SCARNA16.1-201ENST00000516133 HECW2Q9P2P5 1572 aa17.55■□□□□ 0.4
SCARNA16.1-201ENST00000516133 RSPH4AQ5TD94 716 aa17.55■□□□□ 0.4
SCARNA16.1-201ENST00000516133 ADAMTSL3P82987 1691 aa17.55■□□□□ 0.4
SCARNA16.1-201ENST00000516133 SYCP2Q9BX26 1530 aa17.54■□□□□ 0.4
SCARNA16.1-201ENST00000516133 BCORL1Q5H9F3 1711 aa17.54■□□□□ 0.4
SCARNA16.1-201ENST00000516133 MLECQ14165 292 aa17.53■□□□□ 0.4
SCARNA16.1-201ENST00000516133 PTPRMP28827 1452 aa17.51■□□□□ 0.39
SCARNA16.1-201ENST00000516133 MBD5Q9P267 1494 aa17.5■□□□□ 0.39
SCARNA16.1-201ENST00000516133 DIP2CQ9Y2E4 1556 aa17.49■□□□□ 0.39
SCARNA16.1-201ENST00000516133 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
SCARNA16.1-201ENST00000516133 KIDINS220Q9ULH0 1771 aa17.48■□□□□ 0.39
SCARNA16.1-201ENST00000516133 SIGLEC1Q9BZZ2 1709 aa17.47■□□□□ 0.39
SCARNA16.1-201ENST00000516133 MADDQ8WXG6 1647 aa17.47■□□□□ 0.39
SCARNA16.1-201ENST00000516133 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
SCARNA16.1-201ENST00000516133 TSPY4P0CV99 314 aa17.46■□□□□ 0.39
SCARNA16.1-201ENST00000516133 TSPY10P0CW01 314 aa17.46■□□□□ 0.39
SCARNA16.1-201ENST00000516133 ABCA6Q8N139 1617 aa17.46■□□□□ 0.39
SCARNA16.1-201ENST00000516133 AGLP35573 1532 aa17.46■□□□□ 0.39
SCARNA16.1-201ENST00000516133 CAMSAP2Q08AD1 1489 aa17.45■□□□□ 0.38
SCARNA16.1-201ENST00000516133 ATP7AQ04656 1500 aa17.45■□□□□ 0.38
SCARNA16.1-201ENST00000516133 RTEL1-TNFRSF6BF6WH68 1400 aa17.45■□□□□ 0.38
SCARNA16.1-201ENST00000516133 MYOM3Q5VTT5 1437 aa17.45■□□□□ 0.38
SCARNA16.1-201ENST00000516133 ESF1Q9H501 851 aaKnown RBP17.44■□□□□ 0.38
SCARNA16.1-201ENST00000516133 CCDC141Q6ZP82 1450 aa17.43■□□□□ 0.38
SCARNA16.1-201ENST00000516133 A2MP01023 1474 aa17.41■□□□□ 0.38
SCARNA16.1-201ENST00000516133 INO80Q9ULG1 1556 aaPredicted RBP17.4■□□□□ 0.38
SCARNA16.1-201ENST00000516133 RIMS1Q86UR5 1692 aaKnown RBP17.4■□□□□ 0.38
SCARNA16.1-201ENST00000516133 PLPPR3Q6T4P5 718 aa17.4■□□□□ 0.38
SCARNA16.1-201ENST00000516133 ARHGEF5Q12774 1597 aa17.38■□□□□ 0.37
SCARNA16.1-201ENST00000516133 DHX29Q7Z478 1369 aaKnown RBP17.38■□□□□ 0.37
SCARNA16.1-201ENST00000516133 FER1L4A9Z1Z3 1794 aa17.38■□□□□ 0.37
SCARNA16.1-201ENST00000516133 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
SCARNA16.1-201ENST00000516133 CEBPAP49715 358 aaPredicted RBP17.35■□□□□ 0.37
SCARNA16.1-201ENST00000516133 GGT6Q6P531 493 aa17.35■□□□□ 0.37
SCARNA16.1-201ENST00000516133 CNTLNQ9NXG0 1405 aa17.35■□□□□ 0.37
SCARNA16.1-201ENST00000516133 ADGBQ8N7X0 1667 aa17.34■□□□□ 0.37
SCARNA16.1-201ENST00000516133 PLXNC1O60486 1568 aa17.33■□□□□ 0.37
SCARNA16.1-201ENST00000516133 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.36
SCARNA16.1-201ENST00000516133 KIF3BO15066 747 aa17.32■□□□□ 0.36
SCARNA16.1-201ENST00000516133 SETD1BQ9UPS6 1966 aaKnown RBP17.29■□□□□ 0.36
SCARNA16.1-201ENST00000516133 PTPN23Q9H3S7 1636 aa17.29■□□□□ 0.36
SCARNA16.1-201ENST00000516133 ZMYM3Q14202 1370 aa17.28■□□□□ 0.36
SCARNA16.1-201ENST00000516133 TCOF1Q13428 1488 aaKnown RBP17.28■□□□□ 0.36
SCARNA16.1-201ENST00000516133 LMTK3Q96Q04 1460 aa17.28■□□□□ 0.36
SCARNA16.1-201ENST00000516133 ABCC5O15440 1437 aa17.28■□□□□ 0.36
SCARNA16.1-201ENST00000516133 MAST1Q9Y2H9 1570 aa17.28■□□□□ 0.36
SCARNA16.1-201ENST00000516133 FAM50AQ14320 339 aaKnown RBP17.26■□□□□ 0.35
SCARNA16.1-201ENST00000516133 WASHC2CQ9Y4E1 1318 aa17.24■□□□□ 0.35
SCARNA16.1-201ENST00000516133 DAPK1P53355 1430 aa17.24■□□□□ 0.35
SCARNA16.1-201ENST00000516133 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
SCARNA16.1-201ENST00000516133 HSPA2P54652 639 aa17.23■□□□□ 0.35
SCARNA16.1-201ENST00000516133 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
SCARNA16.1-201ENST00000516133 C3P01024 1663 aa17.23■□□□□ 0.35
SCARNA16.1-201ENST00000516133 NPATQ14207 1427 aa17.22■□□□□ 0.35
SCARNA16.1-201ENST00000516133 KIF15Q9NS87 1388 aa17.22■□□□□ 0.35
SCARNA16.1-201ENST00000516133 UHRF1BP1Q6BDS2 1440 aa17.21■□□□□ 0.35
SCARNA16.1-201ENST00000516133 MROH2AA6NES4 1674 aa17.21■□□□□ 0.35
SCARNA16.1-201ENST00000516133 ANKRD30AQ9BXX3 1397 aa17.21■□□□□ 0.35
SCARNA16.1-201ENST00000516133 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms