RNA–Protein interactions for RNA: ENST00000515877.5

GPN1-210, Transcript of GPN-loop GTPase 1, humanhuman

TSL 5 BASIC

Gene GPN1, Length 1,646 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-210ENST00000515877 RAPGEF6Q8TEU7 1601 aa12.79□□□□□ -0.36
GPN1-210ENST00000515877 MTUS2Q5JR59 1369 aa12.79□□□□□ -0.36
GPN1-210ENST00000515877 CCER1Q8TC90 406 aaPredicted RBP12.79□□□□□ -0.36
GPN1-210ENST00000515877 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
GPN1-210ENST00000515877 PHLDB1Q86UU1 1377 aa12.77□□□□□ -0.37
GPN1-210ENST00000515877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.76□□□□□ -0.37
GPN1-210ENST00000515877 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
GPN1-210ENST00000515877 SPRYD3Q8NCJ5 442 aa12.74□□□□□ -0.37
GPN1-210ENST00000515877 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
GPN1-210ENST00000515877 SHROOM2Q13796 1616 aa12.74□□□□□ -0.37
GPN1-210ENST00000515877 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
GPN1-210ENST00000515877 NCOA2Q15596 1464 aa12.72□□□□□ -0.37
GPN1-210ENST00000515877 TIMELESSQ9UNS1 1208 aa12.72□□□□□ -0.37
GPN1-210ENST00000515877 CDK13Q14004 1512 aaKnown RBP12.71□□□□□ -0.37
GPN1-210ENST00000515877 MAGI3Q5TCQ9 1506 aa12.71□□□□□ -0.37
GPN1-210ENST00000515877 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
GPN1-210ENST00000515877 NUP153P49790 1475 aaKnown RBP12.71□□□□□ -0.37
GPN1-210ENST00000515877 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.38
GPN1-210ENST00000515877 TSHZ2Q9NRE2 1034 aa12.7□□□□□ -0.38
GPN1-210ENST00000515877 MYOM3Q5VTT5 1437 aa12.7□□□□□ -0.38
GPN1-210ENST00000515877 ABCA8O94911 1581 aa12.69□□□□□ -0.38
GPN1-210ENST00000515877 NBR1Q14596 966 aa12.68□□□□□ -0.38
GPN1-210ENST00000515877 CDK11AQ9UQ88 783 aaPredicted RBP12.68□□□□□ -0.38
GPN1-210ENST00000515877 TULP1O00294 542 aaPredicted RBP12.67□□□□□ -0.38
GPN1-210ENST00000515877 PRG4Q92954 1404 aaPredicted RBP12.67□□□□□ -0.38
GPN1-210ENST00000515877 PTPN23Q9H3S7 1636 aa12.67□□□□□ -0.38
GPN1-210ENST00000515877 ADCY10Q96PN6 1610 aa12.66□□□□□ -0.38
GPN1-210ENST00000515877 FAM50AQ14320 339 aaKnown RBP12.66□□□□□ -0.38
GPN1-210ENST00000515877 PLB1Q6P1J6 1458 aa12.66□□□□□ -0.38
GPN1-210ENST00000515877 CLASP1Q7Z460 1538 aa12.65□□□□□ -0.38
GPN1-210ENST00000515877 CLSPNQ9HAW4 1339 aa12.65□□□□□ -0.38
GPN1-210ENST00000515877 MIA2Q96PC5 1412 aa12.64□□□□□ -0.39
GPN1-210ENST00000515877 TCOF1Q13428 1488 aaKnown RBP12.64□□□□□ -0.39
GPN1-210ENST00000515877 ITSN2Q9NZM3 1697 aa12.63□□□□□ -0.39
GPN1-210ENST00000515877 RGL2O15211 777 aa12.62□□□□□ -0.39
GPN1-210ENST00000515877 PTPRGP23470 1445 aa12.62□□□□□ -0.39
GPN1-210ENST00000515877 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
GPN1-210ENST00000515877 SETD5Q9C0A6 1442 aa12.62□□□□□ -0.39
GPN1-210ENST00000515877 ITGAEP38570 1179 aa12.62□□□□□ -0.39
GPN1-210ENST00000515877 DHX57Q6P158 1386 aaKnown RBP12.59□□□□□ -0.39
GPN1-210ENST00000515877 RAB3GAP2Q9H2M9 1393 aa12.59□□□□□ -0.39
GPN1-210ENST00000515877 ARXQ96QS3 562 aa12.59□□□□□ -0.39
GPN1-210ENST00000515877 ERICH6Q7L0X2 663 aa12.58□□□□□ -0.4
GPN1-210ENST00000515877 DAXXQ9UER7 740 aaPredicted RBP12.58□□□□□ -0.4
GPN1-210ENST00000515877 GTF3C3Q9Y5Q9 886 aa12.58□□□□□ -0.4
GPN1-210ENST00000515877 KIF14Q15058 1648 aa12.58□□□□□ -0.4
GPN1-210ENST00000515877 ATP10BO94823 1461 aa12.57□□□□□ -0.4
GPN1-210ENST00000515877 ARID3CA6NKF2 412 aa12.57□□□□□ -0.4
GPN1-210ENST00000515877 UACAQ9BZF9 1416 aa12.57□□□□□ -0.4
GPN1-210ENST00000515877 GCC2Q8IWJ2 1684 aa12.55□□□□□ -0.4
GPN1-210ENST00000515877 ABCC2Q92887 1545 aa12.55□□□□□ -0.4
GPN1-210ENST00000515877 HFM1A2PYH4 1435 aa12.55□□□□□ -0.4
GPN1-210ENST00000515877 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
GPN1-210ENST00000515877 ERCC6L2Q5T890 1561 aa12.54□□□□□ -0.4
GPN1-210ENST00000515877 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
GPN1-210ENST00000515877 DNAJC5Q9H3Z4 198 aa12.54□□□□□ -0.4
GPN1-210ENST00000515877 DNMT1P26358 1616 aaKnown RBP12.53□□□□□ -0.4
GPN1-210ENST00000515877 CDC42BPAQ5VT25 1732 aa12.53□□□□□ -0.4
GPN1-210ENST00000515877 PTPRKQ15262 1439 aa12.52□□□□□ -0.41
GPN1-210ENST00000515877 CHGAP10645 457 aaKnown RBP12.51□□□□□ -0.41
GPN1-210ENST00000515877 UHRF1BP1LA0JNW5 1464 aa12.51□□□□□ -0.41
GPN1-210ENST00000515877 GPATCH8Q9UKJ3 1502 aaKnown RBP12.51□□□□□ -0.41
GPN1-210ENST00000515877 ACIN1Q9UKV3 1341 aaKnown RBP12.5□□□□□ -0.41
GPN1-210ENST00000515877 ADGBQ8N7X0 1667 aa12.49□□□□□ -0.41
GPN1-210ENST00000515877 ABCC10Q5T3U5 1492 aa12.49□□□□□ -0.41
GPN1-210ENST00000515877 NAIPQ13075 1403 aa12.49□□□□□ -0.41
GPN1-210ENST00000515877 CROCC2H7BZ55 1655 aa12.49□□□□□ -0.41
GPN1-210ENST00000515877 CAMSAP2Q08AD1 1489 aa12.48□□□□□ -0.41
GPN1-210ENST00000515877 POLA2Q14181 598 aa12.48□□□□□ -0.41
GPN1-210ENST00000515877 DAPK1P53355 1430 aa12.48□□□□□ -0.41
GPN1-210ENST00000515877 ZCCHC11Q5TAX3 1644 aaKnown RBP12.47□□□□□ -0.41
GPN1-210ENST00000515877 ROCK1Q13464 1354 aa12.47□□□□□ -0.41
GPN1-210ENST00000515877 CFDP1Q9UEE9 299 aaPredicted RBP12.47□□□□□ -0.41
GPN1-210ENST00000515877 PREX2Q70Z35 1606 aa12.47□□□□□ -0.41
GPN1-210ENST00000515877 MAPKBP1O60336 1514 aa12.46□□□□□ -0.41
GPN1-210ENST00000515877 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
GPN1-210ENST00000515877 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.41
GPN1-210ENST00000515877 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
GPN1-210ENST00000515877 KDM5BQ9UGL1 1544 aa12.45□□□□□ -0.42
GPN1-210ENST00000515877 ABCC5O15440 1437 aa12.45□□□□□ -0.42
GPN1-210ENST00000515877 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
GPN1-210ENST00000515877 CDC42BPBQ9Y5S2 1711 aa12.44□□□□□ -0.42
GPN1-210ENST00000515877 ARHGEF5Q12774 1597 aa12.42□□□□□ -0.42
GPN1-210ENST00000515877 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
GPN1-210ENST00000515877 ADGRL2O95490 1459 aa12.41□□□□□ -0.42
GPN1-210ENST00000515877 SHANK2Q9UPX8 1470 aa12.41□□□□□ -0.42
GPN1-210ENST00000515877 TTC37Q6PGP7 1564 aa12.4□□□□□ -0.42
GPN1-210ENST00000515877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.4□□□□□ -0.42
GPN1-210ENST00000515877 ZNF644Q9H582 1327 aaPredicted RBP12.4□□□□□ -0.42
GPN1-210ENST00000515877 RRP7BPQ9NSQ0 103 aa12.39□□□□□ -0.43
GPN1-210ENST00000515877 CHIC2Q9UKJ5 165 aa12.39□□□□□ -0.43
GPN1-210ENST00000515877 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
GPN1-210ENST00000515877 SAMD9LQ8IVG5 1584 aa12.38□□□□□ -0.43
GPN1-210ENST00000515877 KDM6BO15054 1643 aa12.37□□□□□ -0.43
GPN1-210ENST00000515877 ZNF777Q9ULD5 760 aaPredicted RBP12.37□□□□□ -0.43
GPN1-210ENST00000515877 CIZ1Q9ULV3 898 aaPredicted RBP12.37□□□□□ -0.43
GPN1-210ENST00000515877 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
GPN1-210ENST00000515877 ARHGAP5Q13017 1502 aa12.36□□□□□ -0.43
GPN1-210ENST00000515877 ZNF316A6NFI3 1004 aaPredicted RBP12.36□□□□□ -0.43
GPN1-210ENST00000515877 TMEM132AQ24JP5 1023 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms