RNA–Protein interactions for RNA: ENST00000515731.1

SDHC-209, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 3

Gene SDHC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-209ENST00000515731 LRRIQ1Q96JM4 1722 aa26.57■■□□□ 1.84
SDHC-209ENST00000515731 SCAPERQ9BY12 1400 aa26.56■■□□□ 1.84
SDHC-209ENST00000515731 CDK11AQ9UQ88 783 aaPredicted RBP26.56■■□□□ 1.84
SDHC-209ENST00000515731 LMTK3Q96Q04 1460 aa26.55■■□□□ 1.84
SDHC-209ENST00000515731 KIF14Q15058 1648 aa26.54■■□□□ 1.84
SDHC-209ENST00000515731 TROQ12816 1431 aaPredicted RBP26.52■■□□□ 1.84
SDHC-209ENST00000515731 EFCAB2Q5VUJ9 269 aa26.52■■□□□ 1.84
SDHC-209ENST00000515731 FER1L4A9Z1Z3 1794 aa26.5■■□□□ 1.83
SDHC-209ENST00000515731 ATP1B4Q9UN42 357 aaPredicted RBP26.48■■□□□ 1.83
SDHC-209ENST00000515731 ATP10AO60312 1499 aa26.48■■□□□ 1.83
SDHC-209ENST00000515731 EHMT2Q96KQ7 1210 aa26.46■■□□□ 1.83
SDHC-209ENST00000515731 KDM5CP41229 1560 aa26.46■■□□□ 1.83
SDHC-209ENST00000515731 CDC42BPBQ9Y5S2 1711 aa26.45■■□□□ 1.83
SDHC-209ENST00000515731 CLIP1P30622 1438 aa26.44■■□□□ 1.82
SDHC-209ENST00000515731 ARHGEF12Q9NZN5 1544 aa26.44■■□□□ 1.82
SDHC-209ENST00000515731 ZNF518AQ6AHZ1 1483 aa26.43■■□□□ 1.82
SDHC-209ENST00000515731 C9orf84Q5VXU9 1444 aa26.43■■□□□ 1.82
SDHC-209ENST00000515731 FBXO41Q8TF61 875 aa26.42■■□□□ 1.82
SDHC-209ENST00000515731 ARHGAP5Q13017 1502 aa26.41■■□□□ 1.82
SDHC-209ENST00000515731 CASKIN1Q8WXD9 1431 aa26.39■■□□□ 1.82
SDHC-209ENST00000515731 CCDC18Q5T9S5 1454 aa26.38■■□□□ 1.81
SDHC-209ENST00000515731 PREX2Q70Z35 1606 aa26.38■■□□□ 1.81
SDHC-209ENST00000515731 REREQ9P2R6 1566 aa26.37■■□□□ 1.81
SDHC-209ENST00000515731 MLECQ14165 292 aa26.34■■□□□ 1.81
SDHC-209ENST00000515731 DIP2CQ9Y2E4 1556 aa26.33■■□□□ 1.81
SDHC-209ENST00000515731 AFAP1Q8N556 730 aa26.33■■□□□ 1.81
SDHC-209ENST00000515731 MLH3Q9UHC1 1453 aa26.33■■□□□ 1.81
SDHC-209ENST00000515731 PREX1Q8TCU6 1659 aa26.32■■□□□ 1.8
SDHC-209ENST00000515731 CDC42BPAQ5VT25 1732 aa26.32■■□□□ 1.8
SDHC-209ENST00000515731 SETD1BQ9UPS6 1966 aaKnown RBP26.32■■□□□ 1.8
SDHC-209ENST00000515731 ITSN2Q9NZM3 1697 aa26.31■■□□□ 1.8
SDHC-209ENST00000515731 ABCC1P33527 1531 aa26.3■■□□□ 1.8
SDHC-209ENST00000515731 HSPA2P54652 639 aa26.29■■□□□ 1.8
SDHC-209ENST00000515731 FYCO1Q9BQS8 1478 aa26.29■■□□□ 1.8
SDHC-209ENST00000515731 ABCA6Q8N139 1617 aa26.28■■□□□ 1.8
SDHC-209ENST00000515731 AGLP35573 1532 aa26.26■■□□□ 1.79
SDHC-209ENST00000515731 PLPPR3Q6T4P5 718 aa26.24■■□□□ 1.79
SDHC-209ENST00000515731 KIDINS220Q9ULH0 1771 aa26.24■■□□□ 1.79
SDHC-209ENST00000515731 TRAPPC8Q9Y2L5 1435 aa26.23■■□□□ 1.79
SDHC-209ENST00000515731 C3P01024 1663 aa26.19■■□□□ 1.78
SDHC-209ENST00000515731 CEBPAP49715 358 aaPredicted RBP26.18■■□□□ 1.78
SDHC-209ENST00000515731 STRCQ7RTU9 1775 aa26.18■■□□□ 1.78
SDHC-209ENST00000515731 MYT1LQ9UL68 1186 aa26.16■■□□□ 1.78
SDHC-209ENST00000515731 SAMD9LQ8IVG5 1584 aa26.15■■□□□ 1.78
SDHC-209ENST00000515731 GPATCH8Q9UKJ3 1502 aaKnown RBP26.14■■□□□ 1.78
SDHC-209ENST00000515731 UHRF1BP1Q6BDS2 1440 aa26.12■■□□□ 1.77
SDHC-209ENST00000515731 CERKQ8TCT0 537 aa26.09■■□□□ 1.77
SDHC-209ENST00000515731 KIAA1107Q9UPP5 1409 aa26.08■■□□□ 1.77
SDHC-209ENST00000515731 MROH2AA6NES4 1674 aa26.08■■□□□ 1.77
SDHC-209ENST00000515731 SYCP2Q9BX26 1530 aa26.08■■□□□ 1.77
SDHC-209ENST00000515731 CNTLNQ9NXG0 1405 aa26.07■■□□□ 1.76
SDHC-209ENST00000515731 DMRT2Q9Y5R5 561 aa26.07■■□□□ 1.76
SDHC-209ENST00000515731 PLEKHH2Q8IVE3 1493 aa26.05■■□□□ 1.76
SDHC-209ENST00000515731 INO80Q9ULG1 1556 aaPredicted RBP26.03■■□□□ 1.76
SDHC-209ENST00000515731 ESF1Q9H501 851 aaKnown RBP26.02■■□□□ 1.76
SDHC-209ENST00000515731 SPAG9O60271 1321 aaKnown RBP26.01■■□□□ 1.75
SDHC-209ENST00000515731 PLXNC1O60486 1568 aa26.01■■□□□ 1.75
SDHC-209ENST00000515731 ATP7AQ04656 1500 aa26.01■■□□□ 1.75
SDHC-209ENST00000515731 SUPT6HQ7KZ85 1726 aaKnown RBP26.01■■□□□ 1.75
SDHC-209ENST00000515731 ZNF777Q9ULD5 760 aaPredicted RBP26.01■■□□□ 1.75
SDHC-209ENST00000515731 HNRNPMP52272 730 aaKnown RBP eCLIP26■■□□□ 1.75
SDHC-209ENST00000515731 PTPRTO14522 1441 aa25.99■■□□□ 1.75
SDHC-209ENST00000515731 CFDP1Q9UEE9 299 aaPredicted RBP25.99■■□□□ 1.75
SDHC-209ENST00000515731 CCNB3Q8WWL7 1395 aa25.98■■□□□ 1.75
SDHC-209ENST00000515731 NPATQ14207 1427 aa25.97■■□□□ 1.75
SDHC-209ENST00000515731 MTUS2Q5JR59 1369 aa25.96■■□□□ 1.75
SDHC-209ENST00000515731 ADGBQ8N7X0 1667 aa25.95■■□□□ 1.74
SDHC-209ENST00000515731 TIAM1Q13009 1591 aa25.95■■□□□ 1.74
SDHC-209ENST00000515731 A2MP01023 1474 aa25.93■■□□□ 1.74
SDHC-209ENST00000515731 ZMYM3Q14202 1370 aa25.93■■□□□ 1.74
SDHC-209ENST00000515731 EHBP1L1Q8N3D4 1523 aa25.93■■□□□ 1.74
SDHC-209ENST00000515731 CLTCQ00610 1675 aaKnown RBP25.92■■□□□ 1.74
SDHC-209ENST00000515731 NCOA1Q15788 1441 aa25.9■■□□□ 1.74
SDHC-209ENST00000515731 MBD5Q9P267 1494 aa25.9■■□□□ 1.74
SDHC-209ENST00000515731 CEP162Q5TB80 1403 aa25.89■■□□□ 1.74
SDHC-209ENST00000515731 ZNF142P52746 1687 aaPredicted RBP25.87■■□□□ 1.73
SDHC-209ENST00000515731 PPP6R1Q9UPN7 881 aa25.87■■□□□ 1.73
SDHC-209ENST00000515731 RTEL1-TNFRSF6BF6WH68 1400 aa25.87■■□□□ 1.73
SDHC-209ENST00000515731 LTBP4Q8N2S1 1624 aa25.85■■□□□ 1.73
SDHC-209ENST00000515731 CAMSAP1Q5T5Y3 1602 aa25.84■■□□□ 1.73
SDHC-209ENST00000515731 ZNF644Q9H582 1327 aaPredicted RBP25.83■■□□□ 1.73
SDHC-209ENST00000515731 MYO3AQ8NEV4 1616 aa25.82■■□□□ 1.72
SDHC-209ENST00000515731 IQSEC2Q5JU85 1478 aa25.82■■□□□ 1.72
SDHC-209ENST00000515731 PTPRKQ15262 1439 aa25.81■■□□□ 1.72
SDHC-209ENST00000515731 PLA2R1Q13018 1463 aa25.78■■□□□ 1.72
SDHC-209ENST00000515731 GGT6Q6P531 493 aa25.77■■□□□ 1.72
SDHC-209ENST00000515731 DHX29Q7Z478 1369 aaKnown RBP25.77■■□□□ 1.72
SDHC-209ENST00000515731 CEP170BQ9Y4F5 1589 aaPredicted RBP25.77■■□□□ 1.72
SDHC-209ENST00000515731 RSPH4AQ5TD94 716 aa25.75■■□□□ 1.71
SDHC-209ENST00000515731 NCOA2Q15596 1464 aa25.74■■□□□ 1.71
SDHC-209ENST00000515731 FAM135AQ9P2D6 1515 aa25.73■■□□□ 1.71
SDHC-209ENST00000515731 CCDC141Q6ZP82 1450 aa25.73■■□□□ 1.71
SDHC-209ENST00000515731 TCOF1Q13428 1488 aaKnown RBP25.72■■□□□ 1.71
SDHC-209ENST00000515731 PKD2Q13563 968 aa25.71■■□□□ 1.71
SDHC-209ENST00000515731 CAMSAP2Q08AD1 1489 aa25.71■■□□□ 1.71
SDHC-209ENST00000515731 ARHGEF5Q12774 1597 aa25.7■■□□□ 1.71
SDHC-209ENST00000515731 NCKAP5LQ9HCH0 1330 aa25.67■■□□□ 1.7
SDHC-209ENST00000515731 DNMT1P26358 1616 aaKnown RBP25.67■■□□□ 1.7
SDHC-209ENST00000515731 A2ML1A8K2U0 1454 aa25.66■■□□□ 1.7
SDHC-209ENST00000515731 KDM5DQ9BY66 1539 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 1622.1 ms