RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 CDC42BPBQ9Y5S2 1711 aa20.93■□□□□ 0.94
CDK7-212ENST00000515180 YEATS2Q9ULM3 1422 aa20.9■□□□□ 0.94
CDK7-212ENST00000515180 POGZQ7Z3K3 1410 aa20.89■□□□□ 0.94
CDK7-212ENST00000515180 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.93
CDK7-212ENST00000515180 PREX2Q70Z35 1606 aa20.89■□□□□ 0.93
CDK7-212ENST00000515180 ZMYM4Q5VZL5 1548 aa20.88■□□□□ 0.93
CDK7-212ENST00000515180 ARHGEF40Q8TER5 1519 aa20.88■□□□□ 0.93
CDK7-212ENST00000515180 CDC42BPAQ5VT25 1732 aa20.87■□□□□ 0.93
CDK7-212ENST00000515180 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
CDK7-212ENST00000515180 AFAP1Q8N556 730 aa20.86■□□□□ 0.93
CDK7-212ENST00000515180 ZFYVE16Q7Z3T8 1539 aa20.86■□□□□ 0.93
CDK7-212ENST00000515180 ZNF777Q9ULD5 760 aaPredicted RBP20.84■□□□□ 0.93
CDK7-212ENST00000515180 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.93
CDK7-212ENST00000515180 GPATCH8Q9UKJ3 1502 aaKnown RBP20.83■□□□□ 0.92
CDK7-212ENST00000515180 SIGLEC1Q9BZZ2 1709 aa20.82■□□□□ 0.92
CDK7-212ENST00000515180 MAGI2Q86UL8 1455 aa20.81■□□□□ 0.92
CDK7-212ENST00000515180 ADAMTSL3P82987 1691 aa20.81■□□□□ 0.92
CDK7-212ENST00000515180 BCORL1Q5H9F3 1711 aa20.81■□□□□ 0.92
CDK7-212ENST00000515180 TRAPPC8Q9Y2L5 1435 aa20.8■□□□□ 0.92
CDK7-212ENST00000515180 ABCC1P33527 1531 aa20.8■□□□□ 0.92
CDK7-212ENST00000515180 MYT1LQ9UL68 1186 aa20.8■□□□□ 0.92
CDK7-212ENST00000515180 ZNF518AQ6AHZ1 1483 aa20.8■□□□□ 0.92
CDK7-212ENST00000515180 VPS8Q8N3P4 1428 aa20.79■□□□□ 0.92
CDK7-212ENST00000515180 CCNB3Q8WWL7 1395 aa20.79■□□□□ 0.92
CDK7-212ENST00000515180 EHBP1L1Q8N3D4 1523 aa20.78■□□□□ 0.92
CDK7-212ENST00000515180 ITSN2Q9NZM3 1697 aa20.77■□□□□ 0.92
CDK7-212ENST00000515180 KDM5CP41229 1560 aa20.77■□□□□ 0.92
CDK7-212ENST00000515180 SAMD9LQ8IVG5 1584 aa20.77■□□□□ 0.92
CDK7-212ENST00000515180 MLECQ14165 292 aa20.77■□□□□ 0.92
CDK7-212ENST00000515180 CFDP1Q9UEE9 299 aaPredicted RBP20.77■□□□□ 0.92
CDK7-212ENST00000515180 ATP10AO60312 1499 aa20.75■□□□□ 0.91
CDK7-212ENST00000515180 MADDQ8WXG6 1647 aa20.75■□□□□ 0.91
CDK7-212ENST00000515180 HNRNPMP52272 730 aaKnown RBP eCLIP20.75■□□□□ 0.912e-9■■■■■ 32.2
CDK7-212ENST00000515180 TIAM1Q13009 1591 aa20.74■□□□□ 0.91
CDK7-212ENST00000515180 HECW2Q9P2P5 1572 aa20.73■□□□□ 0.91
CDK7-212ENST00000515180 PTPRMP28827 1452 aa20.73■□□□□ 0.91
CDK7-212ENST00000515180 SYCP2Q9BX26 1530 aa20.73■□□□□ 0.91
CDK7-212ENST00000515180 C9orf84Q5VXU9 1444 aa20.72■□□□□ 0.91
CDK7-212ENST00000515180 ZNF644Q9H582 1327 aaPredicted RBP20.72■□□□□ 0.91
CDK7-212ENST00000515180 MLH3Q9UHC1 1453 aa20.7■□□□□ 0.9
CDK7-212ENST00000515180 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
CDK7-212ENST00000515180 DIP2CQ9Y2E4 1556 aa20.7■□□□□ 0.9
CDK7-212ENST00000515180 ABCA6Q8N139 1617 aa20.7■□□□□ 0.9
CDK7-212ENST00000515180 RIMS1Q86UR5 1692 aaKnown RBP20.7■□□□□ 0.9
CDK7-212ENST00000515180 NCOA2Q15596 1464 aa20.69■□□□□ 0.9
CDK7-212ENST00000515180 KANK4Q5T7N3 995 aaPredicted RBP20.68■□□□□ 0.9
CDK7-212ENST00000515180 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
CDK7-212ENST00000515180 KIDINS220Q9ULH0 1771 aa20.67■□□□□ 0.9
CDK7-212ENST00000515180 LRRC9Q6ZRR7 1453 aa20.66■□□□□ 0.9
CDK7-212ENST00000515180 KIAA1107Q9UPP5 1409 aa20.65■□□□□ 0.9
CDK7-212ENST00000515180 PLEKHH2Q8IVE3 1493 aa20.64■□□□□ 0.89
CDK7-212ENST00000515180 SPAG9O60271 1321 aaKnown RBP20.64■□□□□ 0.89
CDK7-212ENST00000515180 FER1L4A9Z1Z3 1794 aa20.62■□□□□ 0.89
CDK7-212ENST00000515180 MAP3K1Q13233 1512 aa20.6■□□□□ 0.89
CDK7-212ENST00000515180 REREQ9P2R6 1566 aa20.59■□□□□ 0.89
CDK7-212ENST00000515180 MBD5Q9P267 1494 aa20.59■□□□□ 0.89
CDK7-212ENST00000515180 ATP7AQ04656 1500 aa20.58■□□□□ 0.89
CDK7-212ENST00000515180 CAMSAP2Q08AD1 1489 aa20.56■□□□□ 0.88
CDK7-212ENST00000515180 INO80Q9ULG1 1556 aaPredicted RBP20.56■□□□□ 0.88
CDK7-212ENST00000515180 CEBPAP49715 358 aaPredicted RBP20.56■□□□□ 0.88
CDK7-212ENST00000515180 APLP2Q06481 763 aa20.56■□□□□ 0.88
CDK7-212ENST00000515180 AGLP35573 1532 aa20.55■□□□□ 0.88
CDK7-212ENST00000515180 A2MP01023 1474 aa20.5■□□□□ 0.87
CDK7-212ENST00000515180 CCDC141Q6ZP82 1450 aa20.5■□□□□ 0.87
CDK7-212ENST00000515180 MYOM3Q5VTT5 1437 aa20.48■□□□□ 0.87
CDK7-212ENST00000515180 LMTK3Q96Q04 1460 aa20.48■□□□□ 0.87
CDK7-212ENST00000515180 HSPA2P54652 639 aa20.47■□□□□ 0.87
CDK7-212ENST00000515180 ESF1Q9H501 851 aaKnown RBP20.47■□□□□ 0.87
CDK7-212ENST00000515180 RTEL1-TNFRSF6BF6WH68 1400 aa20.46■□□□□ 0.87
CDK7-212ENST00000515180 PLXNC1O60486 1568 aa20.46■□□□□ 0.87
CDK7-212ENST00000515180 ADGBQ8N7X0 1667 aa20.45■□□□□ 0.86
CDK7-212ENST00000515180 RSPH4AQ5TD94 716 aa20.45■□□□□ 0.86
CDK7-212ENST00000515180 ARHGEF5Q12774 1597 aa20.44■□□□□ 0.86
CDK7-212ENST00000515180 GGT6Q6P531 493 aa20.44■□□□□ 0.86
CDK7-212ENST00000515180 MIA2Q96PC5 1412 aa20.44■□□□□ 0.86
CDK7-212ENST00000515180 C3P01024 1663 aa20.42■□□□□ 0.86
CDK7-212ENST00000515180 TSPY4P0CV99 314 aa20.42■□□□□ 0.86
CDK7-212ENST00000515180 TSPY10P0CW01 314 aa20.42■□□□□ 0.86
CDK7-212ENST00000515180 DHX29Q7Z478 1369 aaKnown RBP20.41■□□□□ 0.86
CDK7-212ENST00000515180 CNTLNQ9NXG0 1405 aa20.37■□□□□ 0.85
CDK7-212ENST00000515180 KIF3BO15066 747 aa20.37■□□□□ 0.85
CDK7-212ENST00000515180 CLTCQ00610 1675 aaKnown RBP20.37■□□□□ 0.85
CDK7-212ENST00000515180 PTPN23Q9H3S7 1636 aa20.37■□□□□ 0.85
CDK7-212ENST00000515180 ZMYM3Q14202 1370 aa20.36■□□□□ 0.85
CDK7-212ENST00000515180 PREX1Q8TCU6 1659 aa20.36■□□□□ 0.85
CDK7-212ENST00000515180 FGD6Q6ZV73 1430 aa20.35■□□□□ 0.85
CDK7-212ENST00000515180 MAST1Q9Y2H9 1570 aa20.34■□□□□ 0.85
CDK7-212ENST00000515180 MROH2AA6NES4 1674 aa20.33■□□□□ 0.85
CDK7-212ENST00000515180 SETD1BQ9UPS6 1966 aaKnown RBP20.32■□□□□ 0.84
CDK7-212ENST00000515180 ABCC5O15440 1437 aa20.32■□□□□ 0.84
CDK7-212ENST00000515180 UHRF1BP1Q6BDS2 1440 aa20.32■□□□□ 0.84
CDK7-212ENST00000515180 PPARGC1BQ86YN6 1023 aaKnown RBP20.3■□□□□ 0.84
CDK7-212ENST00000515180 TCOF1Q13428 1488 aaKnown RBP20.3■□□□□ 0.84
CDK7-212ENST00000515180 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
CDK7-212ENST00000515180 DAPK1P53355 1430 aa20.27■□□□□ 0.84
CDK7-212ENST00000515180 CROCC2H7BZ55 1655 aa20.26■□□□□ 0.83
CDK7-212ENST00000515180 FAM50AQ14320 339 aaKnown RBP20.26■□□□□ 0.83
CDK7-212ENST00000515180 RRP7BPQ9NSQ0 103 aa20.26■□□□□ 0.83
CDK7-212ENST00000515180 CHIC2Q9UKJ5 165 aa20.26■□□□□ 0.83
CDK7-212ENST00000515180 DNMT1P26358 1616 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms